RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 CHD6Q8TD26 2715 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 LAMB2P55268 1798 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 HEG1Q9ULI3 1381 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 SGPL1O95470 568 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 PTPN12Q05209 780 aaKnown RBP8.54□□□□□ -1.04
CIT-213ENST00000543324 SLC39A6Q13433 755 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 CRY2Q49AN0 593 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 GAS2L2Q8NHY3 880 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 PHACTR3Q96KR7 559 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 YTHDC1Q96MU7 727 aaKnown RBP8.54□□□□□ -1.04
CIT-213ENST00000543324 RNF208Q9H0X6 261 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 TBC1D2BQ9UPU7 963 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 CFAP47Q6ZTR5 3102 aa8.54□□□□□ -1.04
CIT-213ENST00000543324 SETXQ7Z333 2677 aaKnown RBP8.53□□□□□ -1.04
CIT-213ENST00000543324 GNAT3A8MTJ3 354 aa8.53□□□□□ -1.04
CIT-213ENST00000543324 CAMTA2O94983 1202 aa8.53□□□□□ -1.04
CIT-213ENST00000543324 PRMT2P55345 433 aa8.53□□□□□ -1.04
CIT-213ENST00000543324 ANGEL2Q5VTE6 544 aaKnown RBP8.53□□□□□ -1.04
CIT-213ENST00000543324 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
CIT-213ENST00000543324 RTFDC1Q9BY42 306 aaPredicted RBP8.53□□□□□ -1.04
CIT-213ENST00000543324 ANKRD36CQ5JPF3 1778 aa8.53□□□□□ -1.04
CIT-213ENST00000543324 FAM86C2PA6NEL3 165 aa8.52□□□□□ -1.05
CIT-213ENST00000543324 SMIM22K7EJ46 135 aa8.52□□□□□ -1.05
CIT-213ENST00000543324 ZBTB48P10074 688 aaPredicted RBP8.52□□□□□ -1.05
CIT-213ENST00000543324 CAPN2P17655 700 aa8.52□□□□□ -1.05
CIT-213ENST00000543324 PRKAR2BP31323 418 aa8.52□□□□□ -1.05
CIT-213ENST00000543324 KIAA2012Q0VF49 1180 aa8.52□□□□□ -1.05
CIT-213ENST00000543324 TTLL12Q14166 644 aaPredicted RBP8.52□□□□□ -1.05
CIT-213ENST00000543324 OTUD7BQ6GQQ9 843 aa8.52□□□□□ -1.05
CIT-213ENST00000543324 ZNF790Q6PG37 636 aa8.52□□□□□ -1.05
CIT-213ENST00000543324 IL27Q8NEV9 243 aa8.52□□□□□ -1.05
CIT-213ENST00000543324 PAWRQ96IZ0 340 aaKnown RBP8.52□□□□□ -1.05
CIT-213ENST00000543324 TSHZ2Q9NRE2 1034 aa8.52□□□□□ -1.05
CIT-213ENST00000543324 PSMD14O00487 310 aa8.51□□□□□ -1.05
CIT-213ENST00000543324 U2SURPO15042 1029 aaKnown RBP8.51□□□□□ -1.05
CIT-213ENST00000543324 GNRH1P01148 92 aa8.51□□□□□ -1.05
CIT-213ENST00000543324 MYCNP04198 464 aaPredicted RBP8.51□□□□□ -1.05
CIT-213ENST00000543324 RPS12P25398 132 aaKnown RBP8.51□□□□□ -1.05
CIT-213ENST00000543324 GRK4P32298 578 aa8.51□□□□□ -1.05
CIT-213ENST00000543324 LDLRAD1Q5T700 205 aa8.51□□□□□ -1.05
CIT-213ENST00000543324 ERMP1Q7Z2K6 904 aa8.51□□□□□ -1.05
CIT-213ENST00000543324 SUPT20HQ8NEM7 779 aa8.51□□□□□ -1.05
CIT-213ENST00000543324 ZNF496Q96IT1 587 aaPredicted RBP8.51□□□□□ -1.05
CIT-213ENST00000543324 ARHGAP39Q9C0H5 1083 aa8.51□□□□□ -1.05
CIT-213ENST00000543324 BCL11AQ9H165 835 aa8.51□□□□□ -1.05
CIT-213ENST00000543324 ANKRD11Q6UB99 2663 aaPredicted RBP8.51□□□□□ -1.05
CIT-213ENST00000543324 ITGB8P26012 769 aa8.5□□□□□ -1.05
CIT-213ENST00000543324 HOXA10P31260 410 aaPredicted RBP8.5□□□□□ -1.05
CIT-213ENST00000543324 COL9A2Q14055 689 aaPredicted RBP8.5□□□□□ -1.05
CIT-213ENST00000543324 TPTE2Q6XPS3 522 aa8.5□□□□□ -1.05
CIT-213ENST00000543324 NECAB2Q7Z6G3 386 aa8.5□□□□□ -1.05
CIT-213ENST00000543324 CFAP53Q96M91 514 aa8.5□□□□□ -1.05
CIT-213ENST00000543324 FBXL18Q96ME1 805 aa8.5□□□□□ -1.05
CIT-213ENST00000543324 PLEKHF1Q96S99 279 aa8.5□□□□□ -1.05
CIT-213ENST00000543324 PTPN18Q99952 460 aa8.5□□□□□ -1.05
CIT-213ENST00000543324 HTATSF1O43719 755 aaKnown RBP8.49□□□□□ -1.05
CIT-213ENST00000543324 BMP1P13497 986 aa8.49□□□□□ -1.05
CIT-213ENST00000543324 SCARF1Q14162 830 aa8.49□□□□□ -1.05
CIT-213ENST00000543324 PRAMEF18Q5VWM3 479 aa8.49□□□□□ -1.05
CIT-213ENST00000543324 DIS3LQ8TF46 1054 aaKnown RBP8.49□□□□□ -1.05
CIT-213ENST00000543324 WNK4Q96J92 1243 aa8.49□□□□□ -1.05
CIT-213ENST00000543324 UNC93B1Q9H1C4 597 aa8.49□□□□□ -1.05
CIT-213ENST00000543324 KCNH6Q9H252 994 aa8.49□□□□□ -1.05
CIT-213ENST00000543324 RIPOR2Q9Y4F9 1068 aa8.49□□□□□ -1.05
CIT-213ENST00000543324 TESPA1A2RU30 521 aaPredicted RBP8.48□□□□□ -1.05
CIT-213ENST00000543324 PRR33A8MZF0 331 aa8.48□□□□□ -1.05
CIT-213ENST00000543324 KCNQ3O43525 872 aa8.48□□□□□ -1.05
CIT-213ENST00000543324 IL6STP40189 918 aaPredicted RBP8.48□□□□□ -1.05
CIT-213ENST00000543324 UBXN2AP68543 259 aa8.48□□□□□ -1.05
CIT-213ENST00000543324 LACTBP83111 547 aaPredicted RBP8.48□□□□□ -1.05
CIT-213ENST00000543324 MDM2Q00987 491 aaPredicted RBP8.48□□□□□ -1.05
CIT-213ENST00000543324 TEFQ10587 303 aa8.48□□□□□ -1.05
CIT-213ENST00000543324 ARMC9Q7Z3E5 817 aa8.48□□□□□ -1.05
CIT-213ENST00000543324 NUDCQ9Y266 331 aa8.48□□□□□ -1.05
CIT-213ENST00000543324 TCERG1O14776 1098 aaKnown RBP8.47□□□□□ -1.05
CIT-213ENST00000543324 TFRCP02786 760 aaKnown RBP8.47□□□□□ -1.05
CIT-213ENST00000543324 U2AF1L5P0DN76 240 aaPredicted RBP8.47□□□□□ -1.05
CIT-213ENST00000543324 NF2P35240 595 aa8.47□□□□□ -1.05
CIT-213ENST00000543324 U2AF1Q01081 240 aaKnown RBP eCLIP8.47□□□□□ -1.05
CIT-213ENST00000543324 TTC5Q8N0Z6 440 aa8.47□□□□□ -1.05
CIT-213ENST00000543324 FMNL2Q96PY5 1086 aa8.47□□□□□ -1.05
CIT-213ENST00000543324 PHOX2BQ99453 314 aa8.47□□□□□ -1.05
CIT-213ENST00000543324 TEX13AQ9BXU3 409 aaPredicted RBP8.47□□□□□ -1.05
CIT-213ENST00000543324 CRISPLD2Q9H0B8 497 aa8.47□□□□□ -1.05
CIT-213ENST00000543324 SCAF8Q9UPN6 1271 aaKnown RBP8.47□□□□□ -1.05
CIT-213ENST00000543324 DUOX1Q9NRD9 1551 aa8.47□□□□□ -1.05
CIT-213ENST00000543324 ABCC12Q96J65 1359 aa8.47□□□□□ -1.05
CIT-213ENST00000543324 DDX60Q8IY21 1712 aaKnown RBP8.46□□□□□ -1.05
CIT-213ENST00000543324 ABCB7O75027 752 aa8.46□□□□□ -1.06
CIT-213ENST00000543324 STARD3NLO95772 234 aa8.46□□□□□ -1.06
CIT-213ENST00000543324 SMAD3P84022 425 aaKnown RBP8.46□□□□□ -1.06
CIT-213ENST00000543324 KIF22Q14807 665 aa8.46□□□□□ -1.06
CIT-213ENST00000543324 CLEC4GQ6UXB4 293 aa8.46□□□□□ -1.06
CIT-213ENST00000543324 MCM10Q7L590 875 aa8.46□□□□□ -1.06
CIT-213ENST00000543324 RPGRQ92834 1020 aaKnown RBP8.46□□□□□ -1.06
CIT-213ENST00000543324 KHSRPQ92945 711 aaKnown RBP eCLIP8.46□□□□□ -1.06
CIT-213ENST00000543324 TRIM47Q96LD4 638 aa8.46□□□□□ -1.06
CIT-213ENST00000543324 CRAMP1Q96RY5 1269 aa8.46□□□□□ -1.06
CIT-213ENST00000543324 ZFYVE28Q9HCC9 887 aa8.46□□□□□ -1.06
CIT-213ENST00000543324 SRRDQ9UH36 339 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms