RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 COA1Q9GZY4 146 aa23.83■■□□□ 1.41
LTBR-211ENST00000543190 CASP8AP2Q9UKL3 1982 aa23.83■■□□□ 1.41
LTBR-211ENST00000543190 FAM155AB1AL88 458 aaPredicted RBP23.82■■□□□ 1.4
LTBR-211ENST00000543190 FKBP1BP68106 108 aa23.82■■□□□ 1.4
LTBR-211ENST00000543190 FKBP5Q13451 457 aaPredicted RBP23.82■■□□□ 1.4
LTBR-211ENST00000543190 STRIP1Q5VSL9 837 aa23.82■■□□□ 1.4
LTBR-211ENST00000543190 C2orf69Q8N8R5 385 aa23.82■■□□□ 1.4
LTBR-211ENST00000543190 ANKRD2Q9GZV1 360 aa23.82■■□□□ 1.4
LTBR-211ENST00000543190 GGA3Q9NZ52 723 aa23.82■■□□□ 1.4
LTBR-211ENST00000543190 PAPPA2Q9BXP8 1791 aa23.82■■□□□ 1.4
LTBR-211ENST00000543190 IGHMBP2P38935 993 aaKnown RBP23.81■■□□□ 1.4
LTBR-211ENST00000543190 CCDC102AQ96A19 550 aa23.81■■□□□ 1.4
LTBR-211ENST00000543190 MYOZ2Q9NPC6 264 aa23.81■■□□□ 1.4
LTBR-211ENST00000543190 CAPN15O75808 1086 aa23.8■■□□□ 1.4
LTBR-211ENST00000543190 ITGA6P23229 1130 aa23.8■■□□□ 1.4
LTBR-211ENST00000543190 DACT2Q5SW24 774 aa23.8■■□□□ 1.4
LTBR-211ENST00000543190 RGMBQ6NW40 437 aa23.8■■□□□ 1.4
LTBR-211ENST00000543190 C15orf52Q6ZUT6 534 aaKnown RBP23.8■■□□□ 1.4
LTBR-211ENST00000543190 ZNF408Q9H9D4 720 aa23.8■■□□□ 1.4
LTBR-211ENST00000543190 ADM5C9JUS6 153 aa23.79■■□□□ 1.4
LTBR-211ENST00000543190 EXOSC9Q06265 439 aaKnown RBP23.79■■□□□ 1.4
LTBR-211ENST00000543190 SCARF1Q14162 830 aa23.79■■□□□ 1.4
LTBR-211ENST00000543190 WTIPA6NIX2 430 aaPredicted RBP23.78■■□□□ 1.4
LTBR-211ENST00000543190 BEND3Q5T5X7 828 aa23.78■■□□□ 1.4
LTBR-211ENST00000543190 RBM26Q5T8P6 1007 aaKnown RBP23.78■■□□□ 1.4
LTBR-211ENST00000543190 SAGE1Q9NXZ1 904 aa23.78■■□□□ 1.4
LTBR-211ENST00000543190 IRS2Q9Y4H2 1338 aa23.78■■□□□ 1.4
LTBR-211ENST00000543190 ECM29Q5VYK3 1845 aa23.77■■□□□ 1.4
LTBR-211ENST00000543190 GRM1Q13255 1194 aa23.77■■□□□ 1.4
LTBR-211ENST00000543190 FAM161AQ3B820 660 aa23.77■■□□□ 1.4
LTBR-211ENST00000543190 DLK2Q6UY11 383 aa23.77■■□□□ 1.4
LTBR-211ENST00000543190 ZNF804BA4D1E1 1349 aa23.77■■□□□ 1.4
LTBR-211ENST00000543190 FOXO4P98177 505 aa23.76■■□□□ 1.39
LTBR-211ENST00000543190 ANGEL2Q5VTE6 544 aaKnown RBP23.76■■□□□ 1.39
LTBR-211ENST00000543190 REM2Q8IYK8 340 aaPredicted RBP23.76■■□□□ 1.39
LTBR-211ENST00000543190 CDCA5Q96FF9 252 aa23.76■■□□□ 1.39
LTBR-211ENST00000543190 ABHD8Q96I13 439 aa23.76■■□□□ 1.39
LTBR-211ENST00000543190 SPINK5Q9NQ38 1064 aaPredicted RBP23.76■■□□□ 1.39
LTBR-211ENST00000543190 ASTN2O75129 1339 aaPredicted RBP23.76■■□□□ 1.39
LTBR-211ENST00000543190 TXNRD3Q86VQ6 643 aa23.75■■□□□ 1.39
LTBR-211ENST00000543190 OGFOD1Q8N543 542 aa23.75■■□□□ 1.39
LTBR-211ENST00000543190 MPHOSPH8Q99549 860 aa23.75■■□□□ 1.39
LTBR-211ENST00000543190 ZNF521Q96K83 1311 aa23.75■■□□□ 1.39
LTBR-211ENST00000543190 SLC10A3P09131 477 aa23.74■■□□□ 1.39
LTBR-211ENST00000543190 ANKRD18BA2A2Z9 1011 aa23.73■■□□□ 1.39
LTBR-211ENST00000543190 CHRNDQ07001 517 aa23.73■■□□□ 1.39
LTBR-211ENST00000543190 ZBED3Q96IU2 234 aaPredicted RBP23.73■■□□□ 1.39
LTBR-211ENST00000543190 ZIC5Q96T25 663 aa23.73■■□□□ 1.39
LTBR-211ENST00000543190 WNT10BO00744 389 aa23.72■■□□□ 1.39
LTBR-211ENST00000543190 ALDH1L1O75891 902 aa23.72■■□□□ 1.39
LTBR-211ENST00000543190 LAMB1P07942 1786 aa23.72■■□□□ 1.39
LTBR-211ENST00000543190 GRM8O00222 908 aa23.71■■□□□ 1.39
LTBR-211ENST00000543190 ZNF157P51786 506 aaPredicted RBP23.71■■□□□ 1.39
LTBR-211ENST00000543190 IFIT5Q13325 482 aaKnown RBP23.71■■□□□ 1.39
LTBR-211ENST00000543190 TTLL5Q6EMB2 1281 aa23.71■■□□□ 1.39
LTBR-211ENST00000543190 COL1A1P02452 1464 aaPredicted RBP23.7■■□□□ 1.38
LTBR-211ENST00000543190 FKBP1AP62942 108 aaKnown RBP23.7■■□□□ 1.38
LTBR-211ENST00000543190 NBPF9Q3BBW0 867 aa23.7■■□□□ 1.38
LTBR-211ENST00000543190 MTMR14Q8NCE2 650 aa23.7■■□□□ 1.38
LTBR-211ENST00000543190 F6X3S4 739 aa23.69■■□□□ 1.38
LTBR-211ENST00000543190 CD209Q9NNX6 404 aa23.69■■□□□ 1.38
LTBR-211ENST00000543190 UTYO14607 1347 aa23.68■■□□□ 1.38
LTBR-211ENST00000543190 IL1R1P14778 569 aa23.68■■□□□ 1.38
LTBR-211ENST00000543190 KIF23Q02241 960 aaPredicted RBP23.68■■□□□ 1.38
LTBR-211ENST00000543190 KLRK1P26718 216 aa23.67■■□□□ 1.38
LTBR-211ENST00000543190 RGS19P49795 217 aa23.67■■□□□ 1.38
LTBR-211ENST00000543190 RASAL3Q86YV0 1011 aa23.66■■□□□ 1.38
LTBR-211ENST00000543190 CSRNP1Q96S65 589 aa23.66■■□□□ 1.38
LTBR-211ENST00000543190 TSKSQ9UJT2 592 aa23.66■■□□□ 1.38
LTBR-211ENST00000543190 HDAC9Q9UKV0 1011 aa23.66■■□□□ 1.38
LTBR-211ENST00000543190 ARAP2Q8WZ64 1704 aa23.65■■□□□ 1.38
LTBR-211ENST00000543190 LMBR1LQ6UX01 489 aa23.65■■□□□ 1.38
LTBR-211ENST00000543190 APOBEC3FQ8IUX4 373 aaKnown RBP23.65■■□□□ 1.38
LTBR-211ENST00000543190 MXD3Q9BW11 206 aa23.65■■□□□ 1.38
LTBR-211ENST00000543190 SALL2Q9Y467 1007 aaPredicted RBP23.65■■□□□ 1.38
LTBR-211ENST00000543190 KCNJ4P48050 445 aa23.64■■□□□ 1.37
LTBR-211ENST00000543190 GTF2IP78347 998 aa23.64■■□□□ 1.37
LTBR-211ENST00000543190 EPHA10Q5JZY3 1008 aa23.64■■□□□ 1.37
LTBR-211ENST00000543190 RNF186Q9NXI6 227 aa23.64■■□□□ 1.37
LTBR-211ENST00000543190 CCDC57Q2TAC2 916 aa23.63■■□□□ 1.37
LTBR-211ENST00000543190 ZNF804AQ7Z570 1209 aa23.63■■□□□ 1.37
LTBR-211ENST00000543190 SRCIN1Q9C0H9 1055 aa23.63■■□□□ 1.37
LTBR-211ENST00000543190 NOM1Q5C9Z4 860 aaKnown RBP23.62■■□□□ 1.37
LTBR-211ENST00000543190 LDHAL6AQ6ZMR3 332 aa23.62■■□□□ 1.37
LTBR-211ENST00000543190 FAM9BQ8IZU0 186 aa23.62■■□□□ 1.37
LTBR-211ENST00000543190 CERS5Q8N5B7 392 aa23.62■■□□□ 1.37
LTBR-211ENST00000543190 MCOLN1Q9GZU1 580 aa23.62■■□□□ 1.37
LTBR-211ENST00000543190 C9orf78Q9NZ63 289 aaPredicted RBP23.62■■□□□ 1.37
LTBR-211ENST00000543190 UNCXA6NJT0 531 aa23.61■■□□□ 1.37
LTBR-211ENST00000543190 TAF5LO75529 589 aa23.61■■□□□ 1.37
LTBR-211ENST00000543190 SASH1O94885 1247 aa23.61■■□□□ 1.37
LTBR-211ENST00000543190 NF2P35240 595 aa23.61■■□□□ 1.37
LTBR-211ENST00000543190 UBE4AQ14139 1066 aa23.61■■□□□ 1.37
LTBR-211ENST00000543190 RABL6Q3YEC7 729 aaPredicted RBP23.61■■□□□ 1.37
LTBR-211ENST00000543190 KIAA0825Q8IV33 1275 aa23.61■■□□□ 1.37
LTBR-211ENST00000543190 KAZALD1Q96I82 304 aa23.61■■□□□ 1.37
LTBR-211ENST00000543190 PPP2R3BQ9Y5P8 575 aa23.61■■□□□ 1.37
LTBR-211ENST00000543190 PTPRCP08575 1304 aa23.6■■□□□ 1.37
LTBR-211ENST00000543190 FAM205AQ6ZU69 1335 aa23.6■■□□□ 1.37
LTBR-211ENST00000543190 MAP3K11Q16584 847 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms