RNA–Protein interactions for RNA: ENST00000543103.1

NLRC5-223, Transcript of NLR family CARD domain containing 5, human

TSL 2

Gene NLRC5, Length 1,896 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NLRC5-223	ENST00000543103	CPA1	P15085	419 aa		19.83	■□□□□ 0.76
NLRC5-223	ENST00000543103	SSFA2	P28290	1259 aa		19.83	■□□□□ 0.76
NLRC5-223	ENST00000543103	ARID4A	P29374	1257 aa	Predicted RBP	19.83	■□□□□ 0.76
NLRC5-223	ENST00000543103	MCM2	P49736	904 aa		19.83	■□□□□ 0.76
NLRC5-223	ENST00000543103	TXNRD1	Q16881	649 aa		19.83	■□□□□ 0.76
NLRC5-223	ENST00000543103	ANKRD18A	Q8IVF6	992 aa		19.83	■□□□□ 0.76
NLRC5-223	ENST00000543103	CELF1	Q92879	486 aa	Known RBP	19.83	■□□□□ 0.76
NLRC5-223	ENST00000543103	TTC14	Q96N46	770 aa		19.83	■□□□□ 0.76
NLRC5-223	ENST00000543103	TAF6L	Q9Y6J9	622 aa		19.83	■□□□□ 0.76
NLRC5-223	ENST00000543103	SLC5A1	P13866	664 aa		19.82	■□□□□ 0.76
NLRC5-223	ENST00000543103	NOL8	Q76FK4	1167 aa	Known RBP	19.82	■□□□□ 0.76
NLRC5-223	ENST00000543103	NLRP3	Q96P20	1036 aa		19.82	■□□□□ 0.76
NLRC5-223	ENST00000543103	TNRC6C	Q9HCJ0	1690 aa	Known RBP	19.82	■□□□□ 0.76
NLRC5-223	ENST00000543103	CYP2E1	P05181	493 aa	Predicted RBP	19.82	■□□□□ 0.76
NLRC5-223	ENST00000543103	CAST	P20810	708 aa	Known RBP	19.82	■□□□□ 0.76
NLRC5-223	ENST00000543103	BSDC1	Q9NW68	430 aa	Predicted RBP	19.82	■□□□□ 0.76
NLRC5-223	ENST00000543103	ZKSCAN1	P17029	563 aa	Predicted RBP	19.81	■□□□□ 0.76
NLRC5-223	ENST00000543103	COL9A3	Q14050	684 aa	Predicted RBP	19.81	■□□□□ 0.76
NLRC5-223	ENST00000543103	ZGPAT	Q8N5A5	531 aa	Known RBP	19.81	■□□□□ 0.76
NLRC5-223	ENST00000543103	OSBP2	Q969R2	916 aa		19.81	■□□□□ 0.76
NLRC5-223	ENST00000543103	JAKMIP1	Q96N16	626 aa	Known RBP	19.81	■□□□□ 0.76
NLRC5-223	ENST00000543103	CIZ1	Q9ULV3	898 aa	Predicted RBP	19.81	■□□□□ 0.76
NLRC5-223	ENST00000543103	MAST3	O60307	1309 aa		19.81	■□□□□ 0.76
NLRC5-223	ENST00000543103	CARMIL3	Q8ND23	1372 aa		19.81	■□□□□ 0.76
NLRC5-223	ENST00000543103	GYS1	P13807	737 aa		19.8	■□□□□ 0.76
NLRC5-223	ENST00000543103	VPS53	Q5VIR6	699 aa		19.8	■□□□□ 0.76
NLRC5-223	ENST00000543103	TM6SF1	Q9BZW5	370 aa		19.8	■□□□□ 0.76
NLRC5-223	ENST00000543103	ZSWIM6	Q9HCJ5	1215 aa		19.8	■□□□□ 0.76
NLRC5-223	ENST00000543103	WTIP	A6NIX2	430 aa	Predicted RBP	19.79	■□□□□ 0.76
NLRC5-223	ENST00000543103		M0R2C6	588 aa		19.79	■□□□□ 0.76
NLRC5-223	ENST00000543103	UQCRFS1P1	P0C7P4	283 aa		19.79	■□□□□ 0.76
NLRC5-223	ENST00000543103	TM4SF1	P30408	202 aa		19.79	■□□□□ 0.76
NLRC5-223	ENST00000543103	AK2	P54819	239 aa		19.79	■□□□□ 0.76
NLRC5-223	ENST00000543103	IL27	Q8NEV9	243 aa		19.79	■□□□□ 0.76
NLRC5-223	ENST00000543103	PIH1D3	Q9NQM4	214 aa	Known RBP	19.79	■□□□□ 0.76
NLRC5-223	ENST00000543103	HMG20B	Q9P0W2	317 aa		19.79	■□□□□ 0.76
NLRC5-223	ENST00000543103	MINPP1	Q9UNW1	487 aa		19.79	■□□□□ 0.76
NLRC5-223	ENST00000543103	RPAP1	Q9BWH6	1393 aa	Predicted RBP	19.79	■□□□□ 0.76
NLRC5-223	ENST00000543103	BCAM	P50895	628 aa		19.78	■□□□□ 0.76
NLRC5-223	ENST00000543103	CUL4A	Q13619	759 aa		19.78	■□□□□ 0.76
NLRC5-223	ENST00000543103	RNF20	Q5VTR2	975 aa		19.78	■□□□□ 0.76
NLRC5-223	ENST00000543103	ZFY	P08048	801 aa	Predicted RBP	19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	RASGRF1	Q13972	1273 aa		19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	TSGA10IP	Q3SY00	556 aa		19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103		U3KPZ7	1027 aa	Predicted RBP	19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	PLSCR1	O15162	318 aa		19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	NPHP1	O15259	732 aa		19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	HSPD1	P10809	573 aa	Known RBP	19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	RPS8	P62241	208 aa	Known RBP	19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	RAB3GAP1	Q15042	981 aa		19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	LRRFIP1	Q32MZ4	808 aa	Known RBP	19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	POTEA	Q6S8J7	498 aa		19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	RUFY3	Q7L099	469 aa		19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	SPATA5	Q8NB90	893 aa		19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	LARP6	Q9BRS8	491 aa	Known RBP	19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	DSCC1	Q9BVC3	393 aa		19.77	■□□□□ 0.76
NLRC5-223	ENST00000543103	DOCK2	Q92608	1830 aa		19.76	■□□□□ 0.75
NLRC5-223	ENST00000543103	APBA3	O96018	575 aa		19.76	■□□□□ 0.75
NLRC5-223	ENST00000543103	CYP21A2	P08686	494 aa		19.76	■□□□□ 0.75
NLRC5-223	ENST00000543103	TTF1	Q15361	905 aa	Predicted RBP	19.76	■□□□□ 0.75
NLRC5-223	ENST00000543103	WASHC4	Q2M389	1173 aa		19.76	■□□□□ 0.75
NLRC5-223	ENST00000543103	PUS7L	Q9H0K6	701 aa	Known RBP	19.76	■□□□□ 0.75
NLRC5-223	ENST00000543103	CYP46A1	Q9Y6A2	500 aa		19.76	■□□□□ 0.75
NLRC5-223	ENST00000543103	CNBD1	Q8NA66	436 aa		19.75	■□□□□ 0.75
NLRC5-223	ENST00000543103	APPBP2	Q92624	585 aa		19.75	■□□□□ 0.75
NLRC5-223	ENST00000543103	PDRG1	Q9NUG6	133 aa		19.75	■□□□□ 0.75
NLRC5-223	ENST00000543103	ADD2	P35612	726 aa		19.75	■□□□□ 0.75
NLRC5-223	ENST00000543103	ZNF827	Q17R98	1081 aa		19.75	■□□□□ 0.75
NLRC5-223	ENST00000543103	PRR5L	Q6MZQ0	368 aa		19.75	■□□□□ 0.75
NLRC5-223	ENST00000543103	TNPO1	Q92973	898 aa	Known RBP	19.75	■□□□□ 0.75
NLRC5-223	ENST00000543103	CWC22	Q9HCG8	908 aa	Known RBP	19.75	■□□□□ 0.75
NLRC5-223	ENST00000543103	LAMA4	Q16363	1823 aa		19.74	■□□□□ 0.75
NLRC5-223	ENST00000543103	FOXP2	O15409	715 aa		19.74	■□□□□ 0.75
NLRC5-223	ENST00000543103	UBE4A	Q14139	1066 aa		19.74	■□□□□ 0.75
NLRC5-223	ENST00000543103	SLC9C2	Q5TAH2	1124 aa		19.74	■□□□□ 0.75
NLRC5-223	ENST00000543103	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	19.74	■□□□□ 0.75
NLRC5-223	ENST00000543103		A0A0G2JLW4	131 aa		19.73	■□□□□ 0.75
NLRC5-223	ENST00000543103	IDH1	O75874	414 aa	Known RBP	19.73	■□□□□ 0.75
NLRC5-223	ENST00000543103	PSMA5	P28066	241 aa		19.73	■□□□□ 0.75
NLRC5-223	ENST00000543103	GYG1	P46976	350 aa		19.73	■□□□□ 0.75
NLRC5-223	ENST00000543103	PKP1	Q13835	747 aa		19.73	■□□□□ 0.75
NLRC5-223	ENST00000543103	WWC3	Q9ULE0	1092 aa		19.73	■□□□□ 0.75
NLRC5-223	ENST00000543103	LIMCH1	Q9UPQ0	1083 aa		19.73	■□□□□ 0.75
NLRC5-223	ENST00000543103	ZNF804B	A4D1E1	1349 aa		19.72	■□□□□ 0.75
NLRC5-223	ENST00000543103	SERPINB2	P05120	415 aa		19.72	■□□□□ 0.75
NLRC5-223	ENST00000543103	BLOC1S2	Q6QNY1	142 aa		19.72	■□□□□ 0.75
NLRC5-223	ENST00000543103	INTS4	Q96HW7	963 aa	Known RBP	19.72	■□□□□ 0.75
NLRC5-223	ENST00000543103	TNS1	Q9HBL0	1735 aa	Known RBP	19.72	■□□□□ 0.75
NLRC5-223	ENST00000543103	TCRBV5S4A2T	A0A5A2	114 aa		19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	LARGE1	O95461	756 aa		19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	RPS6KB1	P23443	525 aa		19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	DDR1	Q08345	913 aa		19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	ZSCAN25	Q6NSZ9	544 aa		19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	AKT1S1	Q96B36	256 aa		19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	TCEANC2	Q96MN5	208 aa		19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	ZNF532	Q9HCE3	1301 aa		19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	PDE6A	P16499	860 aa		19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	MCM4	P33991	863 aa		19.71	■□□□□ 0.75
NLRC5-223	ENST00000543103	UBE3C	Q15386	1083 aa		19.71	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms