RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 DDX46Q7L014 1031 aaKnown RBP19.55■□□□□ 0.72
KDM2B-216ENST00000543025 CHGBP05060 677 aa19.54■□□□□ 0.72
KDM2B-216ENST00000543025 LLPHQ9BRT6 129 aaKnown RBP19.54■□□□□ 0.72
KDM2B-216ENST00000543025 TOGARAM1Q9Y4F4 1720 aa19.54■□□□□ 0.72
KDM2B-216ENST00000543025 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
KDM2B-216ENST00000543025 PTCD1O75127 700 aaKnown RBP19.54■□□□□ 0.72
KDM2B-216ENST00000543025 FGD1P98174 961 aa19.54■□□□□ 0.72
KDM2B-216ENST00000543025 SCRN1Q12765 414 aa19.54■□□□□ 0.72
KDM2B-216ENST00000543025 SMARCC2Q8TAQ2 1214 aa19.54■□□□□ 0.72
KDM2B-216ENST00000543025 CASP7P55210 303 aa19.53■□□□□ 0.72
KDM2B-216ENST00000543025 PLBD2Q8NHP8 589 aa19.53■□□□□ 0.72
KDM2B-216ENST00000543025 ZMYND15Q9H091 742 aa19.53■□□□□ 0.72
KDM2B-216ENST00000543025 QTRT2Q9H974 415 aaKnown RBP19.53■□□□□ 0.72
KDM2B-216ENST00000543025 PALLDQ8WX93 1383 aa19.53■□□□□ 0.72
KDM2B-216ENST00000543025 EXOC5O00471 708 aa19.53■□□□□ 0.72
KDM2B-216ENST00000543025 CHAF1AQ13111 956 aaPredicted RBP19.53■□□□□ 0.72
KDM2B-216ENST00000543025 TDRD7Q8NHU6 1098 aaKnown RBP19.53■□□□□ 0.72
KDM2B-216ENST00000543025 DDX11Q96FC9 970 aa19.53■□□□□ 0.72
KDM2B-216ENST00000543025 KIF3AQ9Y496 699 aa19.53■□□□□ 0.72
KDM2B-216ENST00000543025 DDB1Q16531 1140 aa19.52■□□□□ 0.72
KDM2B-216ENST00000543025 PFKFB2O60825 505 aa19.52■□□□□ 0.71
KDM2B-216ENST00000543025 CAVIN2O95810 425 aa19.52■□□□□ 0.71
KDM2B-216ENST00000543025 PTGS1P23219 599 aa19.52■□□□□ 0.71
KDM2B-216ENST00000543025 LMBR1LQ6UX01 489 aa19.52■□□□□ 0.71
KDM2B-216ENST00000543025 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.52■□□□□ 0.71
KDM2B-216ENST00000543025 ZNF165P49910 485 aa19.51■□□□□ 0.71
KDM2B-216ENST00000543025 STOX1Q6ZVD7 989 aa19.51■□□□□ 0.71
KDM2B-216ENST00000543025 DHX32Q7L7V1 743 aaKnown RBP19.51■□□□□ 0.71
KDM2B-216ENST00000543025 PLA2G4DQ86XP0 818 aa19.51■□□□□ 0.71
KDM2B-216ENST00000543025 LRRC2Q9BYS8 371 aa19.51■□□□□ 0.71
KDM2B-216ENST00000543025 HELLSQ9NRZ9 838 aa19.51■□□□□ 0.71
KDM2B-216ENST00000543025 DSCC1Q9BVC3 393 aa19.51■□□□□ 0.71
KDM2B-216ENST00000543025 TRIM5Q9C035 493 aa19.51■□□□□ 0.71
KDM2B-216ENST00000543025 NKX1-1Q15270 411 aaPredicted RBP19.5■□□□□ 0.71
KDM2B-216ENST00000543025 ZNF772Q68DY9 489 aaPredicted RBP19.5■□□□□ 0.71
KDM2B-216ENST00000543025 NAA16Q6N069 864 aaPredicted RBP19.5■□□□□ 0.71
KDM2B-216ENST00000543025 TICAM2Q86XR7 235 aa19.5■□□□□ 0.71
KDM2B-216ENST00000543025 DRC7Q8IY82 874 aa19.5■□□□□ 0.71
KDM2B-216ENST00000543025 NSUN7Q8NE18 718 aaKnown RBP19.5■□□□□ 0.71
KDM2B-216ENST00000543025 DNAJC25Q9H1X3 360 aa19.5■□□□□ 0.71
KDM2B-216ENST00000543025 PAG1Q9NWQ8 432 aa19.5■□□□□ 0.71
KDM2B-216ENST00000543025 LAMB4A4D0S4 1761 aa19.5■□□□□ 0.71
KDM2B-216ENST00000543025 ZNF75DP51815 510 aa19.49■□□□□ 0.71
KDM2B-216ENST00000543025 CCDC186Q7Z3E2 898 aa19.49■□□□□ 0.71
KDM2B-216ENST00000543025 GOLIM4O00461 696 aa19.49■□□□□ 0.71
KDM2B-216ENST00000543025 CABP4P57796 275 aa19.49■□□□□ 0.71
KDM2B-216ENST00000543025 FOXO4P98177 505 aa19.49■□□□□ 0.71
KDM2B-216ENST00000543025 NEUROD6Q96NK8 337 aa19.49■□□□□ 0.71
KDM2B-216ENST00000543025 GPR108Q9NPR9 543 aa19.49■□□□□ 0.71
KDM2B-216ENST00000543025 DOT1LQ8TEK3 1739 aa19.48■□□□□ 0.71
KDM2B-216ENST00000543025 A0A0G2JS52 829 aa19.48■□□□□ 0.71
KDM2B-216ENST00000543025 AGXT2Q9BYV1 514 aa19.48■□□□□ 0.71
KDM2B-216ENST00000543025 LAMA4Q16363 1823 aa19.48■□□□□ 0.71
KDM2B-216ENST00000543025 H7C1W4 665 aa19.48■□□□□ 0.71
KDM2B-216ENST00000543025 ATG9AQ7Z3C6 839 aa19.48■□□□□ 0.71
KDM2B-216ENST00000543025 ZNF710Q8N1W2 664 aa19.48■□□□□ 0.71
KDM2B-216ENST00000543025 TSC1Q92574 1164 aa19.48■□□□□ 0.71
KDM2B-216ENST00000543025 ITGB4P16144 1822 aa19.47■□□□□ 0.71
KDM2B-216ENST00000543025 PTPDC1A2A3K4 754 aa19.47■□□□□ 0.71
KDM2B-216ENST00000543025 ADD1P35611 737 aaKnown RBP19.47■□□□□ 0.71
KDM2B-216ENST00000543025 CTAGE5O15320 804 aa19.47■□□□□ 0.71
KDM2B-216ENST00000543025 EXOSC10Q01780 885 aaKnown RBP19.47■□□□□ 0.71
KDM2B-216ENST00000543025 CEBPZQ03701 1054 aaKnown RBP19.47■□□□□ 0.71
KDM2B-216ENST00000543025 APOBRQ0VD83 1088 aa19.47■□□□□ 0.71
KDM2B-216ENST00000543025 CCDC94Q9BW85 323 aaPredicted RBP19.47■□□□□ 0.71
KDM2B-216ENST00000543025 RCOR1Q9UKL0 485 aa19.47■□□□□ 0.71
KDM2B-216ENST00000543025 MYH15Q9Y2K3 1946 aa19.46■□□□□ 0.71
KDM2B-216ENST00000543025 ONECUT3O60422 494 aaPredicted RBP19.46■□□□□ 0.71
KDM2B-216ENST00000543025 CTDNEP1O95476 244 aa19.46■□□□□ 0.71
KDM2B-216ENST00000543025 IL15P40933 162 aaPredicted RBP19.46■□□□□ 0.71
KDM2B-216ENST00000543025 ZMYM1Q5SVZ6 1142 aa19.46■□□□□ 0.71
KDM2B-216ENST00000543025 ATL3Q6DD88 541 aa19.46■□□□□ 0.71
KDM2B-216ENST00000543025 MARCH10Q8NA82 808 aaPredicted RBP19.46■□□□□ 0.71
KDM2B-216ENST00000543025 ILDR1Q86SU0 546 aaPredicted RBP19.46■□□□□ 0.71
KDM2B-216ENST00000543025 ARID3AQ99856 593 aa19.46■□□□□ 0.71
KDM2B-216ENST00000543025 HSPD1P10809 573 aaKnown RBP19.45■□□□□ 0.7
KDM2B-216ENST00000543025 CWC25Q9NXE8 425 aaPredicted RBP19.45■□□□□ 0.7
KDM2B-216ENST00000543025 BRWD3Q6RI45 1802 aa19.45■□□□□ 0.7
KDM2B-216ENST00000543025 E7EWF7 191 aa19.45■□□□□ 0.7
KDM2B-216ENST00000543025 GOLGA6L19H0YKK7 550 aa19.45■□□□□ 0.7
KDM2B-216ENST00000543025 RIOK3O14730 519 aaKnown RBP19.45■□□□□ 0.7
KDM2B-216ENST00000543025 CDC25BP30305 580 aa19.45■□□□□ 0.7
KDM2B-216ENST00000543025 TIMM10P62072 90 aa19.45■□□□□ 0.7
KDM2B-216ENST00000543025 ZSCAN25Q6NSZ9 544 aa19.45■□□□□ 0.7
KDM2B-216ENST00000543025 CCAR1Q8IX12 1150 aaKnown RBP19.45■□□□□ 0.7
KDM2B-216ENST00000543025 BCL2L12Q9HB09 334 aa19.45■□□□□ 0.7
KDM2B-216ENST00000543025 CLIP2Q9UDT6 1046 aa19.45■□□□□ 0.7
KDM2B-216ENST00000543025 RGS17Q9UGC6 210 aaPredicted RBP19.45■□□□□ 0.7
KDM2B-216ENST00000543025 NRBP1Q9UHY1 535 aa19.45■□□□□ 0.7
KDM2B-216ENST00000543025 SALL1Q9NSC2 1324 aa19.45■□□□□ 0.7
KDM2B-216ENST00000543025 LRMPQ12912 555 aa19.44■□□□□ 0.7
KDM2B-216ENST00000543025 SLFNL1Q499Z3 407 aa19.44■□□□□ 0.7
KDM2B-216ENST00000543025 CHMP4CQ96CF2 233 aa19.44■□□□□ 0.7
KDM2B-216ENST00000543025 ZNF396Q96N95 335 aaPredicted RBP19.44■□□□□ 0.7
KDM2B-216ENST00000543025 CCT2P78371 535 aaKnown RBP19.44■□□□□ 0.7
KDM2B-216ENST00000543025 NBPF26B4DH59 902 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 IQCB1Q15051 598 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 STX1AQ16623 288 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 NBPF14Q5TI25 921 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 NBPF10Q6P3W6 841 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms