RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-215	ENST00000542133	PITPNM2	Q9BZ72	1349 aa		10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	COL6A3	P12111	3177 aa		10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	MYL6B	P14649	208 aa		10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	MKRN3	Q13064	507 aa	Known RBP	10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	DDX46	Q7L014	1031 aa	Known RBP	10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	TMC4	Q7Z404	712 aa		10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	TICAM2	Q86XR7	235 aa		10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	BBX	Q8WY36	941 aa	Predicted RBP	10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	RTF1	Q92541	710 aa	Known RBP	10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	ARMC5	Q96C12	935 aa		10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	UTP14A	Q9BVJ6	771 aa	Known RBP	10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	RRP7A	Q9Y3A4	280 aa	Known RBP	10.15	□□□□□ -0.78
NPIPB4-215	ENST00000542133	TTLL13P	A6NNM8	815 aa		10.14	□□□□□ -0.79
NPIPB4-215	ENST00000542133	RIMBP2	O15034	1052 aa		10.14	□□□□□ -0.79
NPIPB4-215	ENST00000542133	ZNF280A	P59817	542 aa	Predicted RBP	10.14	□□□□□ -0.79
NPIPB4-215	ENST00000542133	SCARF1	Q14162	830 aa		10.14	□□□□□ -0.79
NPIPB4-215	ENST00000542133	DCTN1	Q14203	1278 aa		10.14	□□□□□ -0.79
NPIPB4-215	ENST00000542133		H0YGN5	161 aa		10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	SEC24B	O95487	1268 aa		10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	VIL1	P09327	827 aa	Known RBP	10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	HSPA5	P11021	654 aa	Known RBP	10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	PYGB	P11216	843 aa		10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	HCLS1	P14317	486 aa	Predicted RBP	10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	DOK7	Q18PE1	504 aa		10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	IFNL1	Q8IU54	200 aa		10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	POLL	Q9UGP5	575 aa		10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	PTPN22	Q9Y2R2	807 aa		10.13	□□□□□ -0.79
NPIPB4-215	ENST00000542133	ALDH1A1	P00352	501 aa		10.12	□□□□□ -0.79
NPIPB4-215	ENST00000542133	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
NPIPB4-215	ENST00000542133	TAF7	Q15545	349 aa	Predicted RBP	10.12	□□□□□ -0.79
NPIPB4-215	ENST00000542133	MIS18A	Q9NYP9	233 aa		10.12	□□□□□ -0.79
NPIPB4-215	ENST00000542133	SCAF8	Q9UPN6	1271 aa	Known RBP	10.12	□□□□□ -0.79
NPIPB4-215	ENST00000542133	ERBB4	Q15303	1308 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	C6orf229	H3BNL8	230 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	CLSTN1	O94985	981 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	GPSM2	P81274	684 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	TTLL12	Q14166	644 aa	Predicted RBP	10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	CC2D1B	Q5T0F9	858 aa	Known RBP	10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	PRAMEF18	Q5VWM3	479 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	LRP10	Q7Z4F1	713 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	NLRP10	Q86W26	655 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	AGBL3	Q8NEM8	1001 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	ERO1A	Q96HE7	468 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	ZNF333	Q96JL9	665 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	EYA3	Q99504	573 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	MYOZ2	Q9NPC6	264 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	TRIM35	Q9UPQ4	493 aa		10.11	□□□□□ -0.79
NPIPB4-215	ENST00000542133	LAMA3	Q16787	3333 aa		10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	HTATSF1	O43719	755 aa	Known RBP	10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	EIF4A1	P60842	406 aa	Known RBP	10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	TCIRG1	Q13488	830 aa		10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	SPRYD7	Q5W111	196 aa		10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	MAMSTR	Q6ZN01	415 aa		10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	TBC1D16	Q8TBP0	767 aa		10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	CD99L2	Q8TCZ2	262 aa		10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	CELF1	Q92879	486 aa	Known RBP	10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	TMEM106C	Q9BVX2	250 aa		10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	RBM27	Q9P2N5	1060 aa	Known RBP	10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	ZNF646	O15015	1829 aa	Predicted RBP	10.1	□□□□□ -0.79
NPIPB4-215	ENST00000542133	SH3TC1	Q8TE82	1336 aa		10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	PER1	O15534	1290 aa	Predicted RBP	10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	CAP1	Q01518	475 aa		10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	PTPN12	Q05209	780 aa	Known RBP	10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	NECTIN2	Q92692	538 aa		10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	GML	Q99445	158 aa		10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	THUMPD2	Q9BTF0	503 aa	Known RBP	10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	SCUBE2	Q9NQ36	999 aa		10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	DLG5	Q8TDM6	1919 aa		10.09	□□□□□ -0.79
NPIPB4-215	ENST00000542133	MANSC4	A6NHS7	340 aa	Predicted RBP	10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	USP17L8	P0C7I0	530 aa		10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	NF2	P35240	595 aa		10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	PDIA6	Q15084	440 aa		10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	NBPF9	Q3BBW0	867 aa		10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	HSP90AB3P	Q58FF7	597 aa		10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	LDLRAD1	Q5T700	205 aa		10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	PNISR	Q8TF01	805 aa	Known RBP	10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	PRO3102	Q9H379	93 aa		10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	EFCC1	Q9HA90	598 aa		10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	TRMT112	Q9UI30	125 aa	Known RBP	10.08	□□□□□ -0.8
NPIPB4-215	ENST00000542133	PROSER3	Q2NL68	480 aa		10.07	□□□□□ -0.8
NPIPB4-215	ENST00000542133	ARMC9	Q7Z3E5	817 aa		10.07	□□□□□ -0.8
NPIPB4-215	ENST00000542133	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.07	□□□□□ -0.8
NPIPB4-215	ENST00000542133	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.07	□□□□□ -0.8
NPIPB4-215	ENST00000542133	SSC5D	A1L4H1	1573 aa		10.06	□□□□□ -0.8
NPIPB4-215	ENST00000542133	UFL1	O94874	794 aa		10.06	□□□□□ -0.8
NPIPB4-215	ENST00000542133	ZBTB48	P10074	688 aa	Predicted RBP	10.06	□□□□□ -0.8
NPIPB4-215	ENST00000542133	ZEB1	P37275	1124 aa	Predicted RBP	10.06	□□□□□ -0.8
NPIPB4-215	ENST00000542133	INHBE	P58166	350 aa		10.06	□□□□□ -0.8
NPIPB4-215	ENST00000542133	CRHR2	Q13324	411 aa		10.06	□□□□□ -0.8
NPIPB4-215	ENST00000542133	AAMP	Q13685	434 aa		10.06	□□□□□ -0.8
NPIPB4-215	ENST00000542133	PRKG1	Q13976	671 aa		10.06	□□□□□ -0.8
NPIPB4-215	ENST00000542133	SF3B3	Q15393	1217 aa	Known RBP	10.06	□□□□□ -0.8
NPIPB4-215	ENST00000542133	COL1A1	P02452	1464 aa	Predicted RBP	10.05	□□□□□ -0.8
NPIPB4-215	ENST00000542133		G3V3G9	751 aa		10.05	□□□□□ -0.8
NPIPB4-215	ENST00000542133	WNT10B	O00744	389 aa		10.05	□□□□□ -0.8
NPIPB4-215	ENST00000542133	ANXA1	P04083	346 aa		10.05	□□□□□ -0.8

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