RNA–Protein interactions for RNA: ENST00000542107.5

CX3CR1-206, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-206ENST00000542107 MST1RQ04912 1400 aa11.81□□□□□ -0.52
CX3CR1-206ENST00000542107 HMGB1P09429 215 aaKnown RBP11.81□□□□□ -0.52
CX3CR1-206ENST00000542107 PDIA3P30101 505 aaKnown RBP11.81□□□□□ -0.52
CX3CR1-206ENST00000542107 ZAP70P43403 619 aa11.81□□□□□ -0.52
CX3CR1-206ENST00000542107 DNAJC10Q8IXB1 793 aa11.81□□□□□ -0.52
CX3CR1-206ENST00000542107 ZSCAN16Q9H4T2 348 aaPredicted RBP11.81□□□□□ -0.52
CX3CR1-206ENST00000542107 SH3TC1Q8TE82 1336 aa11.8□□□□□ -0.52
CX3CR1-206ENST00000542107 SYTL4Q96C24 671 aaPredicted RBP11.8□□□□□ -0.52
CX3CR1-206ENST00000542107 DSCC1Q9BVC3 393 aa11.8□□□□□ -0.52
CX3CR1-206ENST00000542107 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
CX3CR1-206ENST00000542107 PCDH11XQ9BZA7 1347 aa11.8□□□□□ -0.52
CX3CR1-206ENST00000542107 PCDH11YQ9BZA8 1340 aa11.8□□□□□ -0.52
CX3CR1-206ENST00000542107 GOLGA6L19H0YKK7 550 aa11.8□□□□□ -0.52
CX3CR1-206ENST00000542107 APPP05067 770 aa11.8□□□□□ -0.52
CX3CR1-206ENST00000542107 IL2RBP14784 551 aa11.8□□□□□ -0.52
CX3CR1-206ENST00000542107 CCDC73Q6ZRK6 1079 aa11.8□□□□□ -0.52
CX3CR1-206ENST00000542107 EXOSC10Q01780 885 aaKnown RBP11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 SF3A1Q15459 793 aaKnown RBP11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 SMARCC2Q8TAQ2 1214 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 TMOD3Q9NYL9 352 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 JCADQ9P266 1359 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 DYNC1I1O14576 645 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 FSIP1Q8NA03 581 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 KIAA1524Q8TCG1 905 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 PUS7LQ9H0K6 701 aaKnown RBP11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 GOLPH3LQ9H4A5 285 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 BECN2A8MW95 431 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 FGAP02671 866 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 RXRAP19793 462 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 HMGN5P82970 282 aaKnown RBP11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 IFIT5Q13325 482 aaKnown RBP11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 METTL24Q5JXM2 366 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 C11orf57Q6ZUT1 292 aaPredicted RBP11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 KIF3AQ9Y496 699 aa11.79□□□□□ -0.52
CX3CR1-206ENST00000542107 WDR17Q8IZU2 1322 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 KLF18A0A0U1RQI7 1052 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 CPLX1O14810 134 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 KINO60870 393 aaKnown RBP11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 TCIRG1Q13488 830 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 IMMTQ16891 758 aaKnown RBP11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 BRINP3Q76B58 766 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 SDF4Q9BRK5 362 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 DENND2AQ9ULE3 1009 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 PHRF1Q9P1Y6 1649 aaKnown RBP11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 TNS3Q68CZ2 1445 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 A0A1B0GVL5 298 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 ERVV-2B6SEH9 535 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 ADD1P35611 737 aaKnown RBP11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 LDHAL6AQ6ZMR3 332 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 RALYLQ86SE5 291 aaKnown RBP11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 STK11IPQ8N1F8 1099 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 CNNM1Q9NRU3 951 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 KAT6BQ8WYB5 2073 aa11.78□□□□□ -0.52
CX3CR1-206ENST00000542107 GOLGA8BA8MQT2 603 aa11.77□□□□□ -0.52
CX3CR1-206ENST00000542107 PRC1O43663 620 aa11.77□□□□□ -0.52
CX3CR1-206ENST00000542107 IDH1O75874 414 aaKnown RBP11.77□□□□□ -0.52
CX3CR1-206ENST00000542107 ZNF75DP51815 510 aa11.77□□□□□ -0.52
CX3CR1-206ENST00000542107 KIF6Q6ZMV9 814 aa11.77□□□□□ -0.52
CX3CR1-206ENST00000542107 CCDC144CPQ8IYA2 1237 aa11.77□□□□□ -0.52
CX3CR1-206ENST00000542107 MYRIPQ8NFW9 859 aa11.77□□□□□ -0.52
CX3CR1-206ENST00000542107 HELBQ8NG08 1087 aaPredicted RBP11.77□□□□□ -0.52
CX3CR1-206ENST00000542107 LLPHQ9BRT6 129 aaKnown RBP11.77□□□□□ -0.52
CX3CR1-206ENST00000542107 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.52
CX3CR1-206ENST00000542107 HLFQ16534 295 aa11.77□□□□□ -0.53
CX3CR1-206ENST00000542107 FILIP1Q7Z7B0 1213 aa11.77□□□□□ -0.53
CX3CR1-206ENST00000542107 C16orf45Q96MC5 204 aaPredicted RBP11.77□□□□□ -0.53
CX3CR1-206ENST00000542107 ZNF396Q96N95 335 aaPredicted RBP11.77□□□□□ -0.53
CX3CR1-206ENST00000542107 GPR108Q9NPR9 543 aa11.77□□□□□ -0.53
CX3CR1-206ENST00000542107 TRPM3Q9HCF6 1732 aaPredicted RBP11.77□□□□□ -0.53
CX3CR1-206ENST00000542107 STK38Q15208 465 aa11.77□□□□□ -0.53
CX3CR1-206ENST00000542107 ISM2Q6H9L7 571 aa11.77□□□□□ -0.53
CX3CR1-206ENST00000542107 ORC3Q9UBD5 711 aaPredicted RBP11.77□□□□□ -0.53
CX3CR1-206ENST00000542107 RCOR1Q9UKL0 485 aa11.77□□□□□ -0.53
CX3CR1-206ENST00000542107 ZNF213O14771 459 aa11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 FDPSP14324 419 aaKnown RBP11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 CHAF1AQ13111 956 aaPredicted RBP11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 ARID5BQ14865 1188 aa11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 NAA16Q6N069 864 aaPredicted RBP11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 C8orf76Q96K31 380 aa11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 AKAP2Q9Y2D5 859 aa11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 PALLDQ8WX93 1383 aa11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 SIPA1L3O60292 1781 aaPredicted RBP11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 BIN1O00499 593 aa11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 GPAA1O43292 621 aa11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 ATP2B3Q16720 1220 aa11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 ZNF592Q92610 1267 aa11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 GREM2Q9H772 168 aa11.76□□□□□ -0.53
CX3CR1-206ENST00000542107 SNAP23O00161 211 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 ISCA1Q9BUE6 129 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 CTNNA3Q9UI47 895 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 TBC1D2BQ9UPU7 963 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 SCN11AQ9UI33 1791 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 TPM3P06753 285 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 ITGA6P23229 1130 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 CCDC144BQ3MJ40 725 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 SLC9C2Q5TAH2 1124 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 PCDHA7Q9UN72 937 aa11.75□□□□□ -0.53
CX3CR1-206ENST00000542107 MRC1P22897 1456 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms