RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 PI16Q6UXB8 463 aa18.31■□□□□ 0.52
CLPTM1-202ENST00000541297 PODXL2Q9NZ53 605 aa18.31■□□□□ 0.52
CLPTM1-202ENST00000541297 ADRA2BP18089 450 aa18.3■□□□□ 0.52
CLPTM1-202ENST00000541297 SF3B3Q15393 1217 aaKnown RBP18.3■□□□□ 0.52
CLPTM1-202ENST00000541297 KBTBD3Q8NAB2 608 aa18.3■□□□□ 0.52
CLPTM1-202ENST00000541297 PUM3Q15397 648 aaKnown RBP18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 SLC10A5Q5PT55 438 aa18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 ZNF589Q86UQ0 364 aaPredicted RBP18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 NLRP3Q96P20 1036 aa18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 SEC62Q99442 399 aaKnown RBP18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 CDC5LQ99459 802 aaKnown RBP18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 GYS1P13807 737 aa18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 HSPA4P34932 840 aa18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 CARMIL3Q8ND23 1372 aa18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 AKAP11Q9UKA4 1901 aa18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 ANKRD18AQ8IVF6 992 aa18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 CELF1Q92879 486 aaKnown RBP18.29■□□□□ 0.52
CLPTM1-202ENST00000541297 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 TPM2P07951 284 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 CHRNDQ07001 517 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 MCTP1Q6DN14 999 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 ZSCAN30Q86W11 494 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 ANP32BQ92688 251 aaKnown RBP18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 ZAP70P43403 619 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 PHKA1P46020 1223 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 ZNF827Q17R98 1081 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 CCDC129Q6ZRS4 1044 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 LPIN2Q92539 896 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 TFCP2L1Q9NZI6 479 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 MYO5AQ9Y4I1 1855 aaKnown RBP18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 CCDC171Q6TFL3 1326 aa18.28■□□□□ 0.52
CLPTM1-202ENST00000541297 FGFR2P21802 821 aa18.27■□□□□ 0.52
CLPTM1-202ENST00000541297 MCAMP43121 646 aa18.27■□□□□ 0.52
CLPTM1-202ENST00000541297 NEK4P51957 841 aa18.27■□□□□ 0.52
CLPTM1-202ENST00000541297 ARAP2Q8WZ64 1704 aa18.27■□□□□ 0.52
CLPTM1-202ENST00000541297 PLSCR1O15162 318 aa18.27■□□□□ 0.51
CLPTM1-202ENST00000541297 CCDC102BQ68D86 513 aa18.27■□□□□ 0.51
CLPTM1-202ENST00000541297 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.27■□□□□ 0.51
CLPTM1-202ENST00000541297 A0A1B0GUL6 1792 aa18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 NCLP19338 710 aaKnown RBP18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 RASEFQ8IZ41 740 aa18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 CNBD1Q8NA66 436 aa18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 MED23Q9ULK4 1368 aa18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 WTIPA6NIX2 430 aaPredicted RBP18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 SLC5A1P13866 664 aa18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 KCNJ4P48050 445 aa18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 ANAPC15P60006 121 aa18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
CLPTM1-202ENST00000541297 TNS1Q9HBL0 1735 aaKnown RBP18.25■□□□□ 0.51
CLPTM1-202ENST00000541297 EPB41L2O43491 1005 aaKnown RBP18.25■□□□□ 0.51
CLPTM1-202ENST00000541297 ST18O60284 1047 aa18.25■□□□□ 0.51
CLPTM1-202ENST00000541297 FBXO41Q8TF61 875 aa18.25■□□□□ 0.51
CLPTM1-202ENST00000541297 SNX14Q9Y5W7 946 aa18.25■□□□□ 0.51
CLPTM1-202ENST00000541297 PKP1Q13835 747 aa18.25■□□□□ 0.51
CLPTM1-202ENST00000541297 CAVIN1Q6NZI2 390 aaKnown RBP18.25■□□□□ 0.51
CLPTM1-202ENST00000541297 MYH7P12883 1935 aa18.25■□□□□ 0.51
CLPTM1-202ENST00000541297 RFX7Q2KHR2 1363 aa18.24■□□□□ 0.51
CLPTM1-202ENST00000541297 RBM8AQ9Y5S9 174 aaKnown RBP18.24■□□□□ 0.51
CLPTM1-202ENST00000541297 BSDC1Q9NW68 430 aaPredicted RBP18.24■□□□□ 0.51
CLPTM1-202ENST00000541297 MSNP26038 577 aaKnown RBP18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 ZNF445P59923 1031 aa18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 MCMDC2Q4G0Z9 681 aa18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 PRR5LQ6MZQ0 368 aa18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 LMBRD1Q9NUN5 540 aa18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 GOLGB1Q14789 3259 aaKnown RBP18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 NUCB2P80303 420 aa18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 ZSCAN23Q3MJ62 389 aa18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 NOL8Q76FK4 1167 aaKnown RBP18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 MAP4K1Q92918 833 aa18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 MINPP1Q9UNW1 487 aa18.23■□□□□ 0.51
CLPTM1-202ENST00000541297 OFD1O75665 1012 aa18.22■□□□□ 0.51
CLPTM1-202ENST00000541297 BCAMP50895 628 aa18.22■□□□□ 0.51
CLPTM1-202ENST00000541297 RPS8P62241 208 aaKnown RBP18.22■□□□□ 0.51
CLPTM1-202ENST00000541297 SERPINB2P05120 415 aa18.22■□□□□ 0.51
CLPTM1-202ENST00000541297 CYP2E1P05181 493 aaPredicted RBP18.22■□□□□ 0.51
CLPTM1-202ENST00000541297 NECTIN1Q15223 517 aa18.22■□□□□ 0.51
CLPTM1-202ENST00000541297 RNF113AO15541 343 aaKnown RBP18.22■□□□□ 0.51
CLPTM1-202ENST00000541297 ARID4AP29374 1257 aaPredicted RBP18.21■□□□□ 0.51
CLPTM1-202ENST00000541297 TM4SF1P30408 202 aa18.21■□□□□ 0.51
CLPTM1-202ENST00000541297 SLC51AQ86UW1 340 aa18.21■□□□□ 0.51
CLPTM1-202ENST00000541297 COL23A1Q86Y22 540 aaPredicted RBP18.21■□□□□ 0.51
CLPTM1-202ENST00000541297 AKT1S1Q96B36 256 aa18.21■□□□□ 0.51
CLPTM1-202ENST00000541297 CPA1P15085 419 aa18.21■□□□□ 0.5
CLPTM1-202ENST00000541297 DDR1Q08345 913 aa18.21■□□□□ 0.5
CLPTM1-202ENST00000541297 CREB3L3Q68CJ9 461 aa18.21■□□□□ 0.5
CLPTM1-202ENST00000541297 RBSNQ9H1K0 784 aa18.21■□□□□ 0.5
CLPTM1-202ENST00000541297 IQSEC3Q9UPP2 1182 aaPredicted RBP18.21■□□□□ 0.5
CLPTM1-202ENST00000541297 WASHC4Q2M389 1173 aa18.2■□□□□ 0.5
CLPTM1-202ENST00000541297 ADCK5Q3MIX3 580 aa18.2■□□□□ 0.5
CLPTM1-202ENST00000541297 ZMYM1Q5SVZ6 1142 aa18.2■□□□□ 0.5
CLPTM1-202ENST00000541297 ZNF512BQ96KM6 892 aaPredicted RBP18.2■□□□□ 0.5
CLPTM1-202ENST00000541297 HMG20BQ9P0W2 317 aa18.2■□□□□ 0.5
CLPTM1-202ENST00000541297 UQCRFS1P1P0C7P4 283 aa18.2■□□□□ 0.5
CLPTM1-202ENST00000541297 RASGRF1Q13972 1273 aa18.2■□□□□ 0.5
CLPTM1-202ENST00000541297 VPS53Q5VIR6 699 aa18.2■□□□□ 0.5
CLPTM1-202ENST00000541297 PIH1D3Q9NQM4 214 aaKnown RBP18.2■□□□□ 0.5
CLPTM1-202ENST00000541297 MAST3O60307 1309 aa18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 M0R2C6 588 aa18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 HELLSQ9NRZ9 838 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms