RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 GDF6Q6KF10 455 aaPredicted RBP8.21□□□□□ -1.1
RAP1B-224ENST00000541216 HFE2Q6ZVN8 426 aa8.21□□□□□ -1.1
RAP1B-224ENST00000541216 CLEC10AQ8IUN9 316 aa8.21□□□□□ -1.1
RAP1B-224ENST00000541216 CACTIN-AS1Q8N1I8 211 aa8.21□□□□□ -1.1
RAP1B-224ENST00000541216 SHKBP1Q8TBC3 707 aa8.21□□□□□ -1.1
RAP1B-224ENST00000541216 PLD4Q96BZ4 506 aa8.21□□□□□ -1.1
RAP1B-224ENST00000541216 GNEQ9Y223 722 aaKnown RBP8.21□□□□□ -1.1
RAP1B-224ENST00000541216 TARSP26639 723 aaKnown RBP8.2□□□□□ -1.1
RAP1B-224ENST00000541216 HELQQ8TDG4 1101 aa8.2□□□□□ -1.1
RAP1B-224ENST00000541216 IFT43Q96FT9 208 aa8.2□□□□□ -1.1
RAP1B-224ENST00000541216 SERPINB4P48594 390 aa8.19□□□□□ -1.1
RAP1B-224ENST00000541216 ETFBKMTQ8IXQ9 262 aa8.19□□□□□ -1.1
RAP1B-224ENST00000541216 FAM46AQ96IP4 442 aaKnown RBP8.19□□□□□ -1.1
RAP1B-224ENST00000541216 MYRFLQ96LU7 910 aa8.19□□□□□ -1.1
RAP1B-224ENST00000541216 FAM83CQ9BQN1 747 aa8.19□□□□□ -1.1
RAP1B-224ENST00000541216 RBSNQ9H1K0 784 aa8.19□□□□□ -1.1
RAP1B-224ENST00000541216 ZBTB39O15060 712 aa8.18□□□□□ -1.1
RAP1B-224ENST00000541216 GHRHP01286 108 aa8.18□□□□□ -1.1
RAP1B-224ENST00000541216 KCNA1Q09470 495 aa8.18□□□□□ -1.1
RAP1B-224ENST00000541216 MTMR3Q13615 1198 aa8.18□□□□□ -1.1
RAP1B-224ENST00000541216 CBLL1Q75N03 491 aa8.18□□□□□ -1.1
RAP1B-224ENST00000541216 STIM2Q9P246 746 aa8.18□□□□□ -1.1
RAP1B-224ENST00000541216 SASH3O75995 380 aa8.17□□□□□ -1.1
RAP1B-224ENST00000541216 NPR3P17342 541 aa8.17□□□□□ -1.1
RAP1B-224ENST00000541216 GRNP28799 593 aaKnown RBP8.17□□□□□ -1.1
RAP1B-224ENST00000541216 ECM1Q16610 540 aa8.17□□□□□ -1.1
RAP1B-224ENST00000541216 ACAD11Q709F0 780 aa8.17□□□□□ -1.1
RAP1B-224ENST00000541216 GIMAP7Q8NHV1 300 aa8.17□□□□□ -1.1
RAP1B-224ENST00000541216 FBXL18Q96ME1 805 aa8.17□□□□□ -1.1
RAP1B-224ENST00000541216 EGFL7Q9UHF1 273 aa8.17□□□□□ -1.1
RAP1B-224ENST00000541216 OPLAHO14841 1288 aa8.16□□□□□ -1.1
RAP1B-224ENST00000541216 MICAL2O94851 1124 aa8.16□□□□□ -1.1
RAP1B-224ENST00000541216 ITGB5P18084 799 aa8.16□□□□□ -1.1
RAP1B-224ENST00000541216 INPP5BP32019 993 aa8.16□□□□□ -1.1
RAP1B-224ENST00000541216 ZNF211Q13398 564 aaPredicted RBP8.16□□□□□ -1.1
RAP1B-224ENST00000541216 TLR7Q9NYK1 1049 aaKnown RBP8.16□□□□□ -1.1
RAP1B-224ENST00000541216 PIM2Q9P1W9 311 aa8.16□□□□□ -1.1
RAP1B-224ENST00000541216 MTMR7Q9Y216 660 aa8.16□□□□□ -1.1
RAP1B-224ENST00000541216 PPME1Q9Y570 386 aa8.16□□□□□ -1.1
RAP1B-224ENST00000541216 LOC102724428A0A0B4J2F2 783 aa8.15□□□□□ -1.1
RAP1B-224ENST00000541216 DBX1A6NMT0 343 aa8.15□□□□□ -1.1
RAP1B-224ENST00000541216 WDR64B1ANS9 1081 aa8.15□□□□□ -1.1
RAP1B-224ENST00000541216 ICMTO60725 284 aa8.15□□□□□ -1.1
RAP1B-224ENST00000541216 BRD2P25440 801 aaKnown RBP8.15□□□□□ -1.1
RAP1B-224ENST00000541216 IDH3AP50213 366 aa8.15□□□□□ -1.1
RAP1B-224ENST00000541216 SIK1P57059 783 aa8.15□□□□□ -1.1
RAP1B-224ENST00000541216 TREML1Q86YW5 311 aa8.15□□□□□ -1.1
RAP1B-224ENST00000541216 FAM20CQ8IXL6 584 aa8.15□□□□□ -1.1
RAP1B-224ENST00000541216 ABL1P00519 1130 aa8.14□□□□□ -1.11
RAP1B-224ENST00000541216 HOXA10P31260 410 aaPredicted RBP8.14□□□□□ -1.11
RAP1B-224ENST00000541216 CD68P34810 354 aaPredicted RBP8.14□□□□□ -1.11
RAP1B-224ENST00000541216 ARSDP51689 593 aa8.14□□□□□ -1.11
RAP1B-224ENST00000541216 FKBP4Q02790 459 aaKnown RBP eCLIP8.14□□□□□ -1.11
RAP1B-224ENST00000541216 SF3B2Q13435 895 aaKnown RBP8.14□□□□□ -1.11
RAP1B-224ENST00000541216 CCER1Q8TC90 406 aaPredicted RBP8.14□□□□□ -1.11
RAP1B-224ENST00000541216 ANO2Q9NQ90 1003 aa8.14□□□□□ -1.11
RAP1B-224ENST00000541216 MPSTP25325 297 aa8.13□□□□□ -1.11
RAP1B-224ENST00000541216 BEND4Q6ZU67 534 aa8.13□□□□□ -1.11
RAP1B-224ENST00000541216 KCNF1Q9H3M0 494 aa8.13□□□□□ -1.11
RAP1B-224ENST00000541216 CCDC39Q9UFE4 941 aa8.13□□□□□ -1.11
RAP1B-224ENST00000541216 IVNS1ABPQ9Y6Y0 642 aa8.13□□□□□ -1.11
RAP1B-224ENST00000541216 SOWAHDA6NJG2 315 aa8.12□□□□□ -1.11
RAP1B-224ENST00000541216 J3QW42 95 aa8.12□□□□□ -1.11
RAP1B-224ENST00000541216 SART1O43290 800 aaKnown RBP8.12□□□□□ -1.11
RAP1B-224ENST00000541216 WISP1O95388 367 aa8.12□□□□□ -1.11
RAP1B-224ENST00000541216 PSAPP07602 524 aa8.12□□□□□ -1.11
RAP1B-224ENST00000541216 SPOCD1Q6ZMY3 1216 aa8.12□□□□□ -1.11
RAP1B-224ENST00000541216 TP53INP2Q8IXH6 220 aa8.12□□□□□ -1.11
RAP1B-224ENST00000541216 ATG3Q9NT62 314 aa8.12□□□□□ -1.11
RAP1B-224ENST00000541216 LEMD3Q9Y2U8 911 aa8.12□□□□□ -1.11
RAP1B-224ENST00000541216 ZAP70P43403 619 aa8.11□□□□□ -1.11
RAP1B-224ENST00000541216 EIF1AXP47813 144 aaKnown RBP8.11□□□□□ -1.11
RAP1B-224ENST00000541216 ARHGAP4P98171 946 aa8.11□□□□□ -1.11
RAP1B-224ENST00000541216 VSIG10LQ86VR7 867 aa8.11□□□□□ -1.11
RAP1B-224ENST00000541216 ABTB2Q8N961 1025 aa8.11□□□□□ -1.11
RAP1B-224ENST00000541216 GALNT11Q8NCW6 608 aa8.11□□□□□ -1.11
RAP1B-224ENST00000541216 H3BRB1 525 aa8.1□□□□□ -1.11
RAP1B-224ENST00000541216 PRNPP04156 253 aa8.1□□□□□ -1.11
RAP1B-224ENST00000541216 BMP3P12645 472 aa8.1□□□□□ -1.11
RAP1B-224ENST00000541216 DUOXA2Q1HG44 320 aa8.1□□□□□ -1.11
RAP1B-224ENST00000541216 ATCAYQ86WG3 371 aa8.1□□□□□ -1.11
RAP1B-224ENST00000541216 AEBP1Q8IUX7 1158 aa8.1□□□□□ -1.11
RAP1B-224ENST00000541216 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
RAP1B-224ENST00000541216 HIF3AQ9Y2N7 669 aa8.1□□□□□ -1.11
RAP1B-224ENST00000541216 FAM13AO94988 1023 aa8.09□□□□□ -1.11
RAP1B-224ENST00000541216 CPSF6Q16630 551 aaKnown RBP eCLIP8.09□□□□□ -1.11
RAP1B-224ENST00000541216 NOM1Q5C9Z4 860 aaKnown RBP8.09□□□□□ -1.11
RAP1B-224ENST00000541216 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.09□□□□□ -1.11
RAP1B-224ENST00000541216 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
RAP1B-224ENST00000541216 RTCBQ9Y3I0 505 aaKnown RBP8.09□□□□□ -1.11
RAP1B-224ENST00000541216 KCNMB2Q9Y691 235 aa8.09□□□□□ -1.11
RAP1B-224ENST00000541216 PATL2C9JE40 543 aaKnown RBP8.08□□□□□ -1.12
RAP1B-224ENST00000541216 LINC01387J3KSC0 135 aa8.08□□□□□ -1.12
RAP1B-224ENST00000541216 FZD6O60353 706 aa8.08□□□□□ -1.12
RAP1B-224ENST00000541216 EGFRP00533 1210 aa8.08□□□□□ -1.12
RAP1B-224ENST00000541216 FOSL1P15407 271 aa8.08□□□□□ -1.12
RAP1B-224ENST00000541216 MSMPQ1L6U9 139 aa8.08□□□□□ -1.12
RAP1B-224ENST00000541216 ZNF648Q5T619 568 aaPredicted RBP8.08□□□□□ -1.12
RAP1B-224ENST00000541216 KIAA1211Q6ZU35 1233 aa8.08□□□□□ -1.12
RAP1B-224ENST00000541216 GLYCTKQ8IVS8 523 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms