RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 CPA1P15085 419 aa17.8■□□□□ 0.44
GABARAPL1-208ENST00000540424 ZSCAN25Q6NSZ9 544 aa17.8■□□□□ 0.44
GABARAPL1-208ENST00000540424 HAUS7Q99871 368 aa17.8■□□□□ 0.44
GABARAPL1-208ENST00000540424 RASSF4Q9H2L5 321 aa17.8■□□□□ 0.44
GABARAPL1-208ENST00000540424 CNPY2Q9Y2B0 182 aa17.8■□□□□ 0.44
GABARAPL1-208ENST00000540424 GJB2P29033 226 aa17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 EVA1CP58658 441 aa17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 PIP4K2BP78356 416 aa17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 FOXO4P98177 505 aa17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 FOXD4L6Q3SYB3 417 aaPredicted RBP17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 FOXD4L3Q6VB84 417 aaPredicted RBP17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 FAM200AQ8TCP9 573 aa17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 TRERF1Q96PN7 1200 aa17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 ST7Q9NRC1 585 aa17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 ATG3Q9NT62 314 aa17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 ZNF215Q9UL58 517 aaPredicted RBP17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 CHMP3Q9Y3E7 222 aa17.79■□□□□ 0.44
GABARAPL1-208ENST00000540424 KCPQ6ZWJ8 1503 aa17.78■□□□□ 0.44
GABARAPL1-208ENST00000540424 IL15P40933 162 aaPredicted RBP17.78■□□□□ 0.44
GABARAPL1-208ENST00000540424 TXLNBQ8N3L3 684 aa17.78■□□□□ 0.44
GABARAPL1-208ENST00000540424 PAPPAQ13219 1627 aa17.78■□□□□ 0.44
GABARAPL1-208ENST00000540424 PDCP20941 246 aa17.78■□□□□ 0.44
GABARAPL1-208ENST00000540424 NOP2P46087 812 aaKnown RBP17.78■□□□□ 0.44
GABARAPL1-208ENST00000540424 LRMPQ12912 555 aa17.78■□□□□ 0.44
GABARAPL1-208ENST00000540424 USPL1Q5W0Q7 1092 aa17.78■□□□□ 0.44
GABARAPL1-208ENST00000540424 U3KPZ7 1027 aaPredicted RBP17.78■□□□□ 0.44
GABARAPL1-208ENST00000540424 TAF5LO75529 589 aa17.77■□□□□ 0.44
GABARAPL1-208ENST00000540424 RPS6KB1P23443 525 aa17.77■□□□□ 0.44
GABARAPL1-208ENST00000540424 DBNDD2Q9BQY9 259 aa17.77■□□□□ 0.44
GABARAPL1-208ENST00000540424 LARP6Q9BRS8 491 aaKnown RBP17.77■□□□□ 0.44
GABARAPL1-208ENST00000540424 TNS2Q63HR2 1409 aa17.77■□□□□ 0.44
GABARAPL1-208ENST00000540424 LARGE1O95461 756 aa17.77■□□□□ 0.43
GABARAPL1-208ENST00000540424 TTLL7Q6ZT98 887 aa17.77■□□□□ 0.43
GABARAPL1-208ENST00000540424 DDX54Q8TDD1 881 aaKnown RBP17.77■□□□□ 0.43
GABARAPL1-208ENST00000540424 TEX13AQ9BXU3 409 aaPredicted RBP17.77■□□□□ 0.43
GABARAPL1-208ENST00000540424 ZNF446Q9NWS9 450 aa17.77■□□□□ 0.43
GABARAPL1-208ENST00000540424 RSPH14Q9UHP6 348 aa17.77■□□□□ 0.43
GABARAPL1-208ENST00000540424 ME3Q16798 604 aa17.76■□□□□ 0.43
GABARAPL1-208ENST00000540424 MCMDC2Q4G0Z9 681 aa17.76■□□□□ 0.43
GABARAPL1-208ENST00000540424 TEX35Q5T0J7 233 aa17.76■□□□□ 0.43
GABARAPL1-208ENST00000540424 CIAO1O76071 339 aa17.76■□□□□ 0.43
GABARAPL1-208ENST00000540424 A1BGP04217 495 aa17.76■□□□□ 0.43
GABARAPL1-208ENST00000540424 ELF2Q15723 593 aa17.76■□□□□ 0.43
GABARAPL1-208ENST00000540424 NUP188Q5SRE5 1749 aa17.75■□□□□ 0.43
GABARAPL1-208ENST00000540424 H2AFXP16104 143 aaPredicted RBP17.75■□□□□ 0.43
GABARAPL1-208ENST00000540424 ZNF589Q86UQ0 364 aaPredicted RBP17.75■□□□□ 0.43
GABARAPL1-208ENST00000540424 PLA2G4DQ86XP0 818 aa17.75■□□□□ 0.43
GABARAPL1-208ENST00000540424 KBTBD3Q8NAB2 608 aa17.75■□□□□ 0.43
GABARAPL1-208ENST00000540424 TPCN1Q9ULQ1 816 aa17.75■□□□□ 0.43
GABARAPL1-208ENST00000540424 SLU7O95391 586 aaKnown RBP17.75■□□□□ 0.43
GABARAPL1-208ENST00000540424 TMOD3Q9NYL9 352 aa17.75■□□□□ 0.43
GABARAPL1-208ENST00000540424 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
GABARAPL1-208ENST00000540424 NYAP1Q6ZVC0 841 aa17.74■□□□□ 0.43
GABARAPL1-208ENST00000540424 STRN4Q9NRL3 753 aa17.74■□□□□ 0.43
GABARAPL1-208ENST00000540424 PALLDQ8WX93 1383 aa17.74■□□□□ 0.43
GABARAPL1-208ENST00000540424 SH3TC1Q8TE82 1336 aa17.74■□□□□ 0.43
GABARAPL1-208ENST00000540424 EYA2O00167 538 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 ZNF75DP51815 510 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 DRC7Q8IY82 874 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 EDC3Q96F86 508 aaKnown RBP17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 NEUROD6Q96NK8 337 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 ZBTB3Q9H5J0 574 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 HELLSQ9NRZ9 838 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 FBXO3Q9UK99 471 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 FHOD1Q9Y613 1164 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 NHSL1Q5SYE7 1610 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 DHX16O60231 1041 aaKnown RBP17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 ATG9AQ7Z3C6 839 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 ZNF592Q92610 1267 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 AHDC1Q5TGY3 1603 aaPredicted RBP17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 ABCA3Q99758 1704 aa17.73■□□□□ 0.43
GABARAPL1-208ENST00000540424 NEMFO60524 1076 aa17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 HMGB1P09429 215 aaKnown RBP17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 LRRFIP1Q32MZ4 808 aaKnown RBP17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 LARP1BQ659C4 914 aaKnown RBP17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 CDC25BP30305 580 aa17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 TPM4P67936 248 aa17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 PTPN14Q15678 1187 aa17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 KIF6Q6ZMV9 814 aa17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 ISCA1Q9BUE6 129 aa17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 RNF216Q9NWF9 866 aaPredicted RBP17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 PAG1Q9NWQ8 432 aa17.72■□□□□ 0.43
GABARAPL1-208ENST00000540424 ZNF609O15014 1411 aa17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 VPS37CA5D8V6 355 aaPredicted RBP17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 TCIRG1Q13488 830 aa17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 DDX46Q7L014 1031 aaKnown RBP17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 NECAB1Q8N987 351 aa17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 NRBP1Q9UHY1 535 aa17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 CASQ1P31415 396 aa17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 GTF2A1P52655 376 aaPredicted RBP17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 CACTINQ8WUQ7 758 aaKnown RBP17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 MRVI1Q9Y6F6 885 aa17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 V9GYY5 206 aaPredicted RBP17.71■□□□□ 0.43
GABARAPL1-208ENST00000540424 TJP1Q07157 1748 aa17.7■□□□□ 0.42
GABARAPL1-208ENST00000540424 KIF2AO00139 706 aaPredicted RBP17.7■□□□□ 0.42
GABARAPL1-208ENST00000540424 STARD3NLO95772 234 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms