RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 RASGRF1Q13972 1273 aa12.52□□□□□ -0.41
PABPC1P4-201ENST00000539977 UBE4AQ14139 1066 aa12.52□□□□□ -0.41
PABPC1P4-201ENST00000539977 TXNRD3Q86VQ6 643 aa12.52□□□□□ -0.41
PABPC1P4-201ENST00000539977 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
PABPC1P4-201ENST00000539977 HMG20BQ9P0W2 317 aa12.52□□□□□ -0.41
PABPC1P4-201ENST00000539977 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 CHRNA5P30532 468 aa12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 HOXA10P31260 410 aaPredicted RBP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 GPSM2P81274 684 aa12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 CCDC129Q6ZRS4 1044 aa12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 ZNF622Q969S3 477 aaKnown RBP eCLIP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 FAM84BQ96KN1 310 aaPredicted RBP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 IPO9Q96P70 1041 aaKnown RBP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 ANKRD2Q9GZV1 360 aa12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 NSFL1CQ9UNZ2 370 aaKnown RBP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 PDE6BP35913 854 aa12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 PTH1RQ03431 593 aa12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 R3HDM1Q15032 1099 aaKnown RBP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 ZNF589Q86UQ0 364 aaPredicted RBP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 VPS37DQ86XT2 251 aa12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 SPATA5Q8NB90 893 aa12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 KIF2CQ99661 725 aa12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 PIH1D3Q9NQM4 214 aaKnown RBP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
PABPC1P4-201ENST00000539977 ZNF804BA4D1E1 1349 aa12.5□□□□□ -0.41
PABPC1P4-201ENST00000539977 SPEF2Q9C093 1822 aa12.5□□□□□ -0.41
PABPC1P4-201ENST00000539977 BBOX1O75936 387 aa12.5□□□□□ -0.41
PABPC1P4-201ENST00000539977 UQCRFS1P1P0C7P4 283 aa12.5□□□□□ -0.41
PABPC1P4-201ENST00000539977 NPR1P16066 1061 aa12.5□□□□□ -0.41
PABPC1P4-201ENST00000539977 C2CD5Q86YS7 1000 aa12.5□□□□□ -0.41
PABPC1P4-201ENST00000539977 RUFY2Q8WXA3 655 aa12.5□□□□□ -0.41
PABPC1P4-201ENST00000539977 CRAMP1Q96RY5 1269 aa12.5□□□□□ -0.41
PABPC1P4-201ENST00000539977 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
PABPC1P4-201ENST00000539977 HIP1O00291 1037 aa12.49□□□□□ -0.41
PABPC1P4-201ENST00000539977 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
PABPC1P4-201ENST00000539977 IDH1O75874 414 aaKnown RBP12.49□□□□□ -0.41
PABPC1P4-201ENST00000539977 CAVIN4Q5BKX8 364 aa12.49□□□□□ -0.41
PABPC1P4-201ENST00000539977 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
PABPC1P4-201ENST00000539977 ZNF512BQ96KM6 892 aaPredicted RBP12.49□□□□□ -0.41
PABPC1P4-201ENST00000539977 LSG1Q9H089 658 aaKnown RBP12.49□□□□□ -0.41
PABPC1P4-201ENST00000539977 PALD1Q9ULE6 856 aa12.49□□□□□ -0.41
PABPC1P4-201ENST00000539977 JAG2Q9Y219 1238 aa12.49□□□□□ -0.41
PABPC1P4-201ENST00000539977 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
PABPC1P4-201ENST00000539977 UTRNP46939 3433 aa12.48□□□□□ -0.41
PABPC1P4-201ENST00000539977 XDHP47989 1333 aa12.48□□□□□ -0.41
PABPC1P4-201ENST00000539977 H0YIN7 160 aa12.48□□□□□ -0.41
PABPC1P4-201ENST00000539977 RNF113AO15541 343 aaKnown RBP12.48□□□□□ -0.41
PABPC1P4-201ENST00000539977 FRAT2O75474 233 aaPredicted RBP12.48□□□□□ -0.41
PABPC1P4-201ENST00000539977 UFL1O94874 794 aa12.48□□□□□ -0.41
PABPC1P4-201ENST00000539977 WASHC4Q2M389 1173 aa12.48□□□□□ -0.41
PABPC1P4-201ENST00000539977 MASTLQ96GX5 879 aa12.48□□□□□ -0.41
PABPC1P4-201ENST00000539977 HIBADHP31937 336 aaKnown RBP12.47□□□□□ -0.41
PABPC1P4-201ENST00000539977 SLC9C2Q5TAH2 1124 aa12.47□□□□□ -0.41
PABPC1P4-201ENST00000539977 FBXO33Q7Z6M2 555 aa12.47□□□□□ -0.41
PABPC1P4-201ENST00000539977 OSBP2Q969R2 916 aa12.47□□□□□ -0.41
PABPC1P4-201ENST00000539977 POLLQ9UGP5 575 aa12.47□□□□□ -0.41
PABPC1P4-201ENST00000539977 WWC3Q9ULE0 1092 aa12.47□□□□□ -0.41
PABPC1P4-201ENST00000539977 C6orf229H3BNL8 230 aa12.46□□□□□ -0.41
PABPC1P4-201ENST00000539977 M0R2C6 588 aa12.46□□□□□ -0.41
PABPC1P4-201ENST00000539977 EIF5BO60841 1220 aaKnown RBP12.46□□□□□ -0.41
PABPC1P4-201ENST00000539977 CHAF1AQ13111 956 aaPredicted RBP12.46□□□□□ -0.41
PABPC1P4-201ENST00000539977 MCMDC2Q4G0Z9 681 aa12.46□□□□□ -0.41
PABPC1P4-201ENST00000539977 ZMYM1Q5SVZ6 1142 aa12.46□□□□□ -0.41
PABPC1P4-201ENST00000539977 ABCF2Q9UG63 623 aa12.46□□□□□ -0.41
PABPC1P4-201ENST00000539977 GGA1Q9UJY5 639 aa12.46□□□□□ -0.41
PABPC1P4-201ENST00000539977 CCDC171Q6TFL3 1326 aa12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 RAD50Q92878 1312 aa12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 ALDH1B1P30837 517 aa12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 VPS53Q5VIR6 699 aa12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 SLC16A10Q8TF71 515 aa12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 DDRGK1Q96HY6 314 aa12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 PUS7LQ9H0K6 701 aaKnown RBP12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 LEMD3Q9Y2U8 911 aa12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 ATP6V0A2Q9Y487 856 aa12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 CASZ1Q86V15 1759 aa12.46□□□□□ -0.42
PABPC1P4-201ENST00000539977 MED23Q9ULK4 1368 aa12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 IRS2Q9Y4H2 1338 aa12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 A0A0G2JLW4 131 aa12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 RIMBP2O15034 1052 aa12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 TTF1Q15361 905 aaPredicted RBP12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 PRPF40BQ6NWY9 871 aaKnown RBP12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 SP8Q8IXZ3 490 aa12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 TBC1D16Q8TBP0 767 aa12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 MAST3O60307 1309 aa12.45□□□□□ -0.42
PABPC1P4-201ENST00000539977 CD2BP2O95400 341 aaKnown RBP12.44□□□□□ -0.42
PABPC1P4-201ENST00000539977 PDE6AP16499 860 aa12.44□□□□□ -0.42
PABPC1P4-201ENST00000539977 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.44□□□□□ -0.42
PABPC1P4-201ENST00000539977 LRP2BPQ9P2M1 347 aa12.44□□□□□ -0.42
PABPC1P4-201ENST00000539977 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
PABPC1P4-201ENST00000539977 RBM8AQ9Y5S9 174 aaKnown RBP12.44□□□□□ -0.42
PABPC1P4-201ENST00000539977 NRXN2Q9P2S2 1712 aa12.44□□□□□ -0.42
PABPC1P4-201ENST00000539977 ZNF532Q9HCE3 1301 aa12.44□□□□□ -0.42
PABPC1P4-201ENST00000539977 ANKRD31Q8N7Z5 1873 aa12.44□□□□□ -0.42
PABPC1P4-201ENST00000539977 MCCP23508 829 aa12.44□□□□□ -0.42
PABPC1P4-201ENST00000539977 ATP2B4P23634 1241 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms