RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 SRP68Q9UHB9 627 aaKnown RBP20.52■□□□□ 0.88
LTBR-207ENST00000539925 LIMCH1Q9UPQ0 1083 aa20.52■□□□□ 0.88
LTBR-207ENST00000539925 ARAP2Q8WZ64 1704 aa20.52■□□□□ 0.88
LTBR-207ENST00000539925 DDX11L8A8MPP1 907 aa20.51■□□□□ 0.87
LTBR-207ENST00000539925 FRAT2O75474 233 aaPredicted RBP20.51■□□□□ 0.87
LTBR-207ENST00000539925 UBE4AQ14139 1066 aa20.51■□□□□ 0.87
LTBR-207ENST00000539925 BICDL1Q6ZP65 573 aa20.51■□□□□ 0.87
LTBR-207ENST00000539925 APPBP2Q92624 585 aa20.51■□□□□ 0.87
LTBR-207ENST00000539925 SH2B1Q9NRF2 756 aaPredicted RBP20.51■□□□□ 0.87
LTBR-207ENST00000539925 NDUFB9Q9Y6M9 179 aa20.51■□□□□ 0.87
LTBR-207ENST00000539925 RPAP1Q9BWH6 1393 aaPredicted RBP20.51■□□□□ 0.87
LTBR-207ENST00000539925 HMGB1P09429 215 aaKnown RBP20.51■□□□□ 0.87
LTBR-207ENST00000539925 ZAP70P43403 619 aa20.51■□□□□ 0.87
LTBR-207ENST00000539925 PDRG1Q9NUG6 133 aa20.51■□□□□ 0.87
LTBR-207ENST00000539925 CTNNA3Q9UI47 895 aa20.51■□□□□ 0.87
LTBR-207ENST00000539925 MCAMP43121 646 aa20.5■□□□□ 0.87
LTBR-207ENST00000539925 CHRNDQ07001 517 aa20.5■□□□□ 0.87
LTBR-207ENST00000539925 BLOC1S2Q6QNY1 142 aa20.5■□□□□ 0.87
LTBR-207ENST00000539925 CLEC17AQ6ZS10 378 aa20.5■□□□□ 0.87
LTBR-207ENST00000539925 UBE3CQ15386 1083 aa20.49■□□□□ 0.87
LTBR-207ENST00000539925 LRRC4BQ9NT99 713 aa20.49■□□□□ 0.87
LTBR-207ENST00000539925 GNL3LQ9NVN8 582 aaKnown RBP20.49■□□□□ 0.87
LTBR-207ENST00000539925 NPHP1O15259 732 aa20.48■□□□□ 0.87
LTBR-207ENST00000539925 PDIA4P13667 645 aaKnown RBP20.48■□□□□ 0.87
LTBR-207ENST00000539925 MCM4P33991 863 aa20.48■□□□□ 0.87
LTBR-207ENST00000539925 ANKRD2Q9GZV1 360 aa20.48■□□□□ 0.87
LTBR-207ENST00000539925 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.48■□□□□ 0.87
LTBR-207ENST00000539925 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.48■□□□□ 0.87
LTBR-207ENST00000539925 PLSCR1O15162 318 aa20.48■□□□□ 0.87
LTBR-207ENST00000539925 ZBTB22O15209 634 aa20.48■□□□□ 0.87
LTBR-207ENST00000539925 TRIM37O94972 964 aa20.48■□□□□ 0.87
LTBR-207ENST00000539925 PHKA1P46020 1223 aa20.48■□□□□ 0.87
LTBR-207ENST00000539925 SCARF1Q14162 830 aa20.48■□□□□ 0.87
LTBR-207ENST00000539925 MAST3O60307 1309 aa20.47■□□□□ 0.87
LTBR-207ENST00000539925 AK2P54819 239 aa20.47■□□□□ 0.87
LTBR-207ENST00000539925 RPS8P62241 208 aaKnown RBP20.47■□□□□ 0.87
LTBR-207ENST00000539925 WASHC4Q2M389 1173 aa20.47■□□□□ 0.87
LTBR-207ENST00000539925 SPATA5Q8NB90 893 aa20.47■□□□□ 0.87
LTBR-207ENST00000539925 HELBQ8NG08 1087 aaPredicted RBP20.47■□□□□ 0.87
LTBR-207ENST00000539925 FOXD4L1Q9NU39 408 aa20.47■□□□□ 0.87
LTBR-207ENST00000539925 GOLGA6L22H0YM25 854 aa20.46■□□□□ 0.87
LTBR-207ENST00000539925 PHF14O94880 888 aa20.46■□□□□ 0.87
LTBR-207ENST00000539925 ADD2P35612 726 aa20.46■□□□□ 0.87
LTBR-207ENST00000539925 MAP3K12Q12852 859 aa20.46■□□□□ 0.87
LTBR-207ENST00000539925 BRWD3Q6RI45 1802 aa20.46■□□□□ 0.87
LTBR-207ENST00000539925 C4AP0C0L4 1744 aa20.46■□□□□ 0.87
LTBR-207ENST00000539925 HSPD1P10809 573 aaKnown RBP20.45■□□□□ 0.86
LTBR-207ENST00000539925 RPS6KB1P23443 525 aa20.45■□□□□ 0.86
LTBR-207ENST00000539925 ADCK5Q3MIX3 580 aa20.45■□□□□ 0.86
LTBR-207ENST00000539925 CNBD1Q8NA66 436 aa20.45■□□□□ 0.86
LTBR-207ENST00000539925 TNPO1Q92973 898 aaKnown RBP20.45■□□□□ 0.86
LTBR-207ENST00000539925 SEC62Q99442 399 aaKnown RBP20.45■□□□□ 0.86
LTBR-207ENST00000539925 SEMA3EO15041 775 aa20.45■□□□□ 0.86
LTBR-207ENST00000539925 IGSF3O75054 1194 aa20.45■□□□□ 0.86
LTBR-207ENST00000539925 CYP2E1P05181 493 aaPredicted RBP20.45■□□□□ 0.86
LTBR-207ENST00000539925 NFIXQ14938 502 aa20.45■□□□□ 0.86
LTBR-207ENST00000539925 CAVIN4Q5BKX8 364 aa20.45■□□□□ 0.86
LTBR-207ENST00000539925 OSBP2Q969R2 916 aa20.45■□□□□ 0.86
LTBR-207ENST00000539925 NEK1Q96PY6 1258 aa20.45■□□□□ 0.86
LTBR-207ENST00000539925 AKAP11Q9UKA4 1901 aa20.44■□□□□ 0.86
LTBR-207ENST00000539925 TXNRD1Q16881 649 aa20.44■□□□□ 0.86
LTBR-207ENST00000539925 TMED8Q6PL24 325 aaPredicted RBP20.44■□□□□ 0.86
LTBR-207ENST00000539925 CCDC129Q6ZRS4 1044 aa20.44■□□□□ 0.86
LTBR-207ENST00000539925 FLAD1Q8NFF5 587 aa20.44■□□□□ 0.86
LTBR-207ENST00000539925 CHMP4CQ96CF2 233 aa20.44■□□□□ 0.86
LTBR-207ENST00000539925 MINPP1Q9UNW1 487 aa20.44■□□□□ 0.86
LTBR-207ENST00000539925 ZNF804BA4D1E1 1349 aa20.44■□□□□ 0.86
LTBR-207ENST00000539925 RXRBP28702 533 aa20.43■□□□□ 0.86
LTBR-207ENST00000539925 SLC9C2Q5TAH2 1124 aa20.43■□□□□ 0.86
LTBR-207ENST00000539925 UBR3Q6ZT12 1888 aa20.43■□□□□ 0.86
LTBR-207ENST00000539925 ST5P78524 1137 aa20.42■□□□□ 0.86
LTBR-207ENST00000539925 RASGRF1Q13972 1273 aa20.42■□□□□ 0.86
LTBR-207ENST00000539925 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
LTBR-207ENST00000539925 ZGPATQ8N5A5 531 aaKnown RBP20.42■□□□□ 0.86
LTBR-207ENST00000539925 IDH1O75874 414 aaKnown RBP20.42■□□□□ 0.86
LTBR-207ENST00000539925 CYP21A2P08686 494 aa20.42■□□□□ 0.86
LTBR-207ENST00000539925 GYS1P13807 737 aa20.42■□□□□ 0.86
LTBR-207ENST00000539925 AMIGO3Q86WK7 504 aa20.42■□□□□ 0.86
LTBR-207ENST00000539925 PDS5AQ29RF7 1337 aaKnown RBP20.41■□□□□ 0.86
LTBR-207ENST00000539925 MYH7P12883 1935 aa20.41■□□□□ 0.86
LTBR-207ENST00000539925 M0R2C6 588 aa20.41■□□□□ 0.86
LTBR-207ENST00000539925 IMMTQ16891 758 aaKnown RBP20.41■□□□□ 0.86
LTBR-207ENST00000539925 PIH1D3Q9NQM4 214 aaKnown RBP20.41■□□□□ 0.86
LTBR-207ENST00000539925 GPAA1O43292 621 aa20.4■□□□□ 0.86
LTBR-207ENST00000539925 PDE6AP16499 860 aa20.4■□□□□ 0.86
LTBR-207ENST00000539925 SKOR2Q2VWA4 1001 aaPredicted RBP20.4■□□□□ 0.86
LTBR-207ENST00000539925 PI16Q6UXB8 463 aa20.4■□□□□ 0.86
LTBR-207ENST00000539925 SMIM5Q71RC9 77 aa20.4■□□□□ 0.86
LTBR-207ENST00000539925 CELF1Q92879 486 aaKnown RBP20.4■□□□□ 0.86
LTBR-207ENST00000539925 DENND2AQ9ULE3 1009 aa20.4■□□□□ 0.86
LTBR-207ENST00000539925 GRAPQ13588 217 aa20.39■□□□□ 0.86
LTBR-207ENST00000539925 NOL8Q76FK4 1167 aaKnown RBP20.39■□□□□ 0.86
LTBR-207ENST00000539925 VPS37DQ86XT2 251 aa20.39■□□□□ 0.86
LTBR-207ENST00000539925 GRAPLQ8TC17 118 aaPredicted RBP20.39■□□□□ 0.86
LTBR-207ENST00000539925 GNAT2P19087 354 aa20.38■□□□□ 0.85
LTBR-207ENST00000539925 TM4SF1P30408 202 aa20.38■□□□□ 0.85
LTBR-207ENST00000539925 BCAMP50895 628 aa20.38■□□□□ 0.85
LTBR-207ENST00000539925 DHX32Q7L7V1 743 aaKnown RBP20.38■□□□□ 0.85
LTBR-207ENST00000539925 ZMYM6O95789 1325 aa20.38■□□□□ 0.85
LTBR-207ENST00000539925 WDR33Q9C0J8 1336 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms