RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 BABAM1Q9NWV8 329 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 RASAL2Q9UJF2 1139 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 IL2RBP14784 551 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 NAPAP54920 295 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 RRAGBQ5VZM2 374 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 GIMAP6Q6P9H5 292 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 LMBR1Q8WVP7 490 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 BRF1Q92994 677 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 MAPKBP1O60336 1514 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 DNA2P51530 1060 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 NCBP1Q09161 790 aaKnown RBP7.38□□□□□ -1.23
LSAMP-207ENST00000539563 LMBR1LQ6UX01 489 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 DZIP3Q86Y13 1208 aaKnown RBP7.38□□□□□ -1.23
LSAMP-207ENST00000539563 NECAB1Q8N987 351 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 IKBKGQ9Y6K9 419 aa7.38□□□□□ -1.23
LSAMP-207ENST00000539563 SPDYE3A6NKU9 549 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 SLC9C2Q5TAH2 1124 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 SPDYE4A6NLX3 237 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 PPP1R2P41236 205 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 GNG11P61952 73 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 TPTE2Q6XPS3 522 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 USP48Q86UV5 1035 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 NAP1L4Q99733 375 aaKnown RBP7.37□□□□□ -1.23
LSAMP-207ENST00000539563 RTCBQ9Y3I0 505 aaKnown RBP7.37□□□□□ -1.23
LSAMP-207ENST00000539563 GCC2Q8IWJ2 1684 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 KRT83P78385 493 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 DDB1Q16531 1140 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 TSHZ3Q63HK5 1081 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 GNA11P29992 359 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 BRAPQ7Z569 592 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 TRIM75PA6NK02 468 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 KIF4AO95239 1232 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 AFMP43652 599 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 UHRF1BP1Q6BDS2 1440 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 CEP112Q8N8E3 955 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 GIMAP7Q8NHV1 300 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 SYNCQ9H7C4 482 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 PHACTR2O75167 634 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 DTHD1Q6ZMT9 781 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 C8orf58Q8NAV2 365 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 PANK2Q9BZ23 570 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 ZC3H12CQ9C0D7 883 aaKnown RBP7.37□□□□□ -1.23
LSAMP-207ENST00000539563 RAD50Q92878 1312 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 PABPN1LA6NDY0 278 aaKnown RBP7.37□□□□□ -1.23
LSAMP-207ENST00000539563 POLR3GO15318 223 aaPredicted RBP7.37□□□□□ -1.23
LSAMP-207ENST00000539563 AKR1B10O60218 316 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 FERP16591 822 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 UBE4AQ14139 1066 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 INTS4Q96HW7 963 aaKnown RBP7.37□□□□□ -1.23
LSAMP-207ENST00000539563 TMX1Q9H3N1 280 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 PCDHB15Q9Y5E8 787 aa7.37□□□□□ -1.23
LSAMP-207ENST00000539563 CTAGE9A4FU28 777 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 F13A1P00488 732 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 RNF187Q5TA31 235 aaPredicted RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 RUFY3Q7L099 469 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 HELLSQ9NRZ9 838 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 NUP153P49790 1475 aaKnown RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 RNF113AO15541 343 aaKnown RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 JARID2Q92833 1246 aaPredicted RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 SRRTQ9BXP5 876 aaKnown RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 STMN4Q9H169 189 aaPredicted RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 DCTPP1Q9H773 170 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 RTL1A6NKG5 1358 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 ABCA5Q8WWZ7 1642 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 CBX1P83916 185 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 SLC4A8Q2Y0W8 1093 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 GRIPAP1Q4V328 841 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 MAGEB6Q8N7X4 407 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 SPAG5Q96R06 1193 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 IMPG2Q9BZV3 1241 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 TSGA10Q9BZW7 698 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 CNPY2Q9Y2B0 182 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 TACC1O75410 805 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 NMIQ13287 307 aaPredicted RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 MAATS1Q7Z4T9 603 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 SMARCC2Q8TAQ2 1214 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 DCAF5Q96JK2 942 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 C6orf163Q5TEZ5 329 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 CREB3L3Q68CJ9 461 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 PAXIP1Q6ZW49 1069 aaPredicted RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 POLKQ9UBT6 870 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 SSX2IPQ9Y2D8 614 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 COMMD10Q9Y6G5 202 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 SPTLC2O15270 562 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 ANXA1P04083 346 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 CEP85Q6P2H3 762 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 FAM200AQ8TCP9 573 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 PCDH11XQ9BZA7 1347 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 PCDH11YQ9BZA8 1340 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 YTHDC2Q9H6S0 1430 aaKnown RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 MYCNP04198 464 aaPredicted RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 HCLS1P14317 486 aaPredicted RBP7.36□□□□□ -1.23
LSAMP-207ENST00000539563 CERS3Q8IU89 383 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 EYA3Q99504 573 aa7.36□□□□□ -1.23
LSAMP-207ENST00000539563 SETD1BQ9UPS6 1966 aaKnown RBP7.35□□□□□ -1.23
LSAMP-207ENST00000539563 A0A1W2PRG0 241 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 DHX32Q7L7V1 743 aaKnown RBP7.35□□□□□ -1.23
LSAMP-207ENST00000539563 MMRN2Q9H8L6 949 aa7.35□□□□□ -1.23
LSAMP-207ENST00000539563 ARFGAP3Q9NP61 516 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms