RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 ANKRD18AQ8IVF6 992 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.42□□□□□ -0.26
CTCFL-212ENST00000539382 RUFY2Q8WXA3 655 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 LPIN2Q92539 896 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 CDC5LQ99459 802 aaKnown RBP13.42□□□□□ -0.26
CTCFL-212ENST00000539382 TFCP2L1Q9NZI6 479 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 MED23Q9ULK4 1368 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 RABEP1Q15276 862 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 MINPP1Q9UNW1 487 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 AKAP11Q9UKA4 1901 aa13.41□□□□□ -0.26
CTCFL-212ENST00000539382 HIP1O00291 1037 aa13.41□□□□□ -0.26
CTCFL-212ENST00000539382 CNBD1Q8NA66 436 aa13.41□□□□□ -0.26
CTCFL-212ENST00000539382 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-212ENST00000539382 CCDC171Q6TFL3 1326 aa13.41□□□□□ -0.26
CTCFL-212ENST00000539382 SERPINB2P05120 415 aa13.41□□□□□ -0.26
CTCFL-212ENST00000539382 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
CTCFL-212ENST00000539382 IL17RAQ96F46 866 aa13.41□□□□□ -0.26
CTCFL-212ENST00000539382 SLKQ9H2G2 1235 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-212ENST00000539382 NPHP1O15259 732 aa13.4□□□□□ -0.26
CTCFL-212ENST00000539382 EPB41L2O43491 1005 aaKnown RBP13.4□□□□□ -0.26
CTCFL-212ENST00000539382 RPS8P62241 208 aaKnown RBP13.4□□□□□ -0.26
CTCFL-212ENST00000539382 HSCBQ8IWL3 235 aa13.4□□□□□ -0.26
CTCFL-212ENST00000539382 POLRMTO00411 1230 aaKnown RBP13.39□□□□□ -0.27
CTCFL-212ENST00000539382 CYP2E1P05181 493 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-212ENST00000539382 BCAMP50895 628 aa13.39□□□□□ -0.27
CTCFL-212ENST00000539382 COL9A3Q14050 684 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-212ENST00000539382 MAP4K1Q92918 833 aa13.39□□□□□ -0.27
CTCFL-212ENST00000539382 ZNF512BQ96KM6 892 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-212ENST00000539382 SNX14Q9Y5W7 946 aa13.39□□□□□ -0.27
CTCFL-212ENST00000539382 GOLGB1Q14789 3259 aaKnown RBP13.39□□□□□ -0.27
CTCFL-212ENST00000539382 SLC5A1P13866 664 aa13.39□□□□□ -0.27
CTCFL-212ENST00000539382 ARID4AP29374 1257 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-212ENST00000539382 EN1Q05925 392 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-212ENST00000539382 NECTIN1Q15223 517 aa13.39□□□□□ -0.27
CTCFL-212ENST00000539382 EZH2Q15910 746 aaKnown RBP13.39□□□□□ -0.27
CTCFL-212ENST00000539382 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
CTCFL-212ENST00000539382 TAF6LQ9Y6J9 622 aa13.39□□□□□ -0.27
CTCFL-212ENST00000539382 RFX7Q2KHR2 1363 aa13.39□□□□□ -0.27
CTCFL-212ENST00000539382 ARAP2Q8WZ64 1704 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 ANAPC15P60006 121 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-212ENST00000539382 HMG20BQ9P0W2 317 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
CTCFL-212ENST00000539382 PNPLA7Q6ZV29 1317 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 K7ELQ4 463 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-212ENST00000539382 MCCP23508 829 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 KLRK1P26718 216 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 NEK4P51957 841 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 RASGRF1Q13972 1273 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 MCMDC2Q4G0Z9 681 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 ZMYM1Q5SVZ6 1142 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
CTCFL-212ENST00000539382 PIH1D3Q9NQM4 214 aaKnown RBP13.38□□□□□ -0.27
CTCFL-212ENST00000539382 A0A1B0GUL6 1792 aa13.38□□□□□ -0.27
CTCFL-212ENST00000539382 ADCK5Q3MIX3 580 aa13.37□□□□□ -0.27
CTCFL-212ENST00000539382 VPS53Q5VIR6 699 aa13.37□□□□□ -0.27
CTCFL-212ENST00000539382 OSBP2Q969R2 916 aa13.37□□□□□ -0.27
CTCFL-212ENST00000539382 CAMKK2Q96RR4 588 aa13.37□□□□□ -0.27
CTCFL-212ENST00000539382 RNF113AO15541 343 aaKnown RBP13.37□□□□□ -0.27
CTCFL-212ENST00000539382 GYG1P46976 350 aa13.37□□□□□ -0.27
CTCFL-212ENST00000539382 KCNB2Q92953 911 aa13.37□□□□□ -0.27
CTCFL-212ENST00000539382 MYO5AQ9Y4I1 1855 aaKnown RBP13.37□□□□□ -0.27
CTCFL-212ENST00000539382 M0R2C6 588 aa13.36□□□□□ -0.27
CTCFL-212ENST00000539382 CPA1P15085 419 aa13.36□□□□□ -0.27
CTCFL-212ENST00000539382 CRY2Q49AN0 593 aa13.36□□□□□ -0.27
CTCFL-212ENST00000539382 IQSEC3Q9UPP2 1182 aaPredicted RBP13.36□□□□□ -0.27
CTCFL-212ENST00000539382 MAST3O60307 1309 aa13.36□□□□□ -0.27
CTCFL-212ENST00000539382 CREB3L3Q68CJ9 461 aa13.36□□□□□ -0.27
CTCFL-212ENST00000539382 SPATA5Q8NB90 893 aa13.36□□□□□ -0.27
CTCFL-212ENST00000539382 SLC27A2O14975 620 aa13.35□□□□□ -0.27
CTCFL-212ENST00000539382 UQCRFS1P1P0C7P4 283 aa13.35□□□□□ -0.27
CTCFL-212ENST00000539382 MSL1Q68DK7 614 aa13.35□□□□□ -0.27
CTCFL-212ENST00000539382 PUS7LQ9H0K6 701 aaKnown RBP13.35□□□□□ -0.27
CTCFL-212ENST00000539382 HELLSQ9NRZ9 838 aa13.35□□□□□ -0.27
CTCFL-212ENST00000539382 FOXP2O15409 715 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 DDIT3P35638 169 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 UBE4AQ14139 1066 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 NFKBIBQ15653 356 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 TXNRD3Q86VQ6 643 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 FAM84BQ96KN1 310 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-212ENST00000539382 ZNF804BA4D1E1 1349 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 A0A0G2JLW4 131 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 DCAF8L1A6NGE4 600 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 ST18O60284 1047 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 ST5P78524 1137 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 GRAPQ13588 217 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 GRAPLQ8TC17 118 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-212ENST00000539382 WWC3Q9ULE0 1092 aa13.34□□□□□ -0.27
CTCFL-212ENST00000539382 IDH1O75874 414 aaKnown RBP13.33□□□□□ -0.28
CTCFL-212ENST00000539382 KCNJ4P48050 445 aa13.33□□□□□ -0.28
CTCFL-212ENST00000539382 DEFB132Q7Z7B7 95 aa13.33□□□□□ -0.28
CTCFL-212ENST00000539382 NLGN1Q8N2Q7 840 aa13.33□□□□□ -0.28
CTCFL-212ENST00000539382 COL1A1P02452 1464 aaPredicted RBP13.33□□□□□ -0.28
CTCFL-212ENST00000539382 RGPD3A6NKT7 1758 aaPredicted RBP13.33□□□□□ -0.28
CTCFL-212ENST00000539382 RGPD4Q7Z3J3 1758 aa13.33□□□□□ -0.28
CTCFL-212ENST00000539382 MMP10P09238 476 aa13.33□□□□□ -0.28
CTCFL-212ENST00000539382 ADD2P35612 726 aa13.33□□□□□ -0.28
CTCFL-212ENST00000539382 WASHC4Q2M389 1173 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms