RNA–Protein interactions for RNA: ENST00000539254.1

CELF1-219, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-219ENST00000539254 SIL1Q9H173 461 aa12.11□□□□□ -0.47
CELF1-219ENST00000539254 ADARB2Q9NS39 739 aaKnown RBP12.11□□□□□ -0.47
CELF1-219ENST00000539254 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
CELF1-219ENST00000539254 MED23Q9ULK4 1368 aa12.1□□□□□ -0.47
CELF1-219ENST00000539254 SCN4AP35499 1836 aa12.1□□□□□ -0.47
CELF1-219ENST00000539254 USP17L3A6NCW0 530 aa12.1□□□□□ -0.47
CELF1-219ENST00000539254 USP17L4A6NCW7 530 aa12.1□□□□□ -0.47
CELF1-219ENST00000539254 FMR1Q06787 632 aaKnown RBP eCLIP12.1□□□□□ -0.47
CELF1-219ENST00000539254 USP17L1Q7RTZ2 530 aa12.1□□□□□ -0.47
CELF1-219ENST00000539254 FTSJ3Q8IY81 847 aaKnown RBP12.1□□□□□ -0.47
CELF1-219ENST00000539254 CNTROBQ8N137 903 aa12.1□□□□□ -0.47
CELF1-219ENST00000539254 COA1Q9GZY4 146 aa12.1□□□□□ -0.47
CELF1-219ENST00000539254 VIL1P09327 827 aaKnown RBP12.09□□□□□ -0.47
CELF1-219ENST00000539254 HIRAP54198 1017 aaPredicted RBP12.09□□□□□ -0.47
CELF1-219ENST00000539254 GTF2IP78347 998 aa12.09□□□□□ -0.47
CELF1-219ENST00000539254 RSBN1LQ6PCB5 846 aaPredicted RBP12.09□□□□□ -0.47
CELF1-219ENST00000539254 USP50Q70EL3 339 aaPredicted RBP12.09□□□□□ -0.47
CELF1-219ENST00000539254 PODNQ7Z5L7 613 aa12.09□□□□□ -0.47
CELF1-219ENST00000539254 CD209Q9NNX6 404 aa12.09□□□□□ -0.47
CELF1-219ENST00000539254 PA2G4Q9UQ80 394 aaKnown RBP12.09□□□□□ -0.47
CELF1-219ENST00000539254 RIPOR2Q9Y4F9 1068 aa12.09□□□□□ -0.47
CELF1-219ENST00000539254 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
CELF1-219ENST00000539254 EGFRP00533 1210 aa12.08□□□□□ -0.48
CELF1-219ENST00000539254 GNAI3P08754 354 aa12.08□□□□□ -0.48
CELF1-219ENST00000539254 GYG1P46976 350 aa12.08□□□□□ -0.48
CELF1-219ENST00000539254 RFX5P48382 616 aaPredicted RBP12.08□□□□□ -0.48
CELF1-219ENST00000539254 TTLL5Q6EMB2 1281 aa12.08□□□□□ -0.48
CELF1-219ENST00000539254 ITPRIPQ8IWB1 547 aa12.08□□□□□ -0.48
CELF1-219ENST00000539254 DZIP1LQ8IYY4 767 aaKnown RBP12.08□□□□□ -0.48
CELF1-219ENST00000539254 PANK1Q8TE04 598 aa12.08□□□□□ -0.48
CELF1-219ENST00000539254 C1orf115Q9H7X2 142 aa12.08□□□□□ -0.48
CELF1-219ENST00000539254 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
CELF1-219ENST00000539254 F8W031 263 aaPredicted RBP12.07□□□□□ -0.48
CELF1-219ENST00000539254 TRAF5O00463 557 aa12.07□□□□□ -0.48
CELF1-219ENST00000539254 RLBP1P12271 317 aa12.07□□□□□ -0.48
CELF1-219ENST00000539254 RPS12P25398 132 aaKnown RBP12.07□□□□□ -0.48
CELF1-219ENST00000539254 PTPN12Q05209 780 aaKnown RBP12.07□□□□□ -0.48
CELF1-219ENST00000539254 ZNF804AQ7Z570 1209 aa12.07□□□□□ -0.48
CELF1-219ENST00000539254 DPF2Q92785 391 aa12.07□□□□□ -0.48
CELF1-219ENST00000539254 GLIS2Q9BZE0 524 aaPredicted RBP12.07□□□□□ -0.48
CELF1-219ENST00000539254 ZNF408Q9H9D4 720 aa12.07□□□□□ -0.48
CELF1-219ENST00000539254 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
CELF1-219ENST00000539254 HDAC5Q9UQL6 1122 aa12.07□□□□□ -0.48
CELF1-219ENST00000539254 EYA2O00167 538 aa12.06□□□□□ -0.48
CELF1-219ENST00000539254 SRGAP3O43295 1099 aa12.06□□□□□ -0.48
CELF1-219ENST00000539254 ITGBL1O95965 494 aaPredicted RBP12.06□□□□□ -0.48
CELF1-219ENST00000539254 GNAI2P04899 355 aa12.06□□□□□ -0.48
CELF1-219ENST00000539254 UBE4AQ14139 1066 aa12.06□□□□□ -0.48
CELF1-219ENST00000539254 KIF4BQ2VIQ3 1234 aa12.06□□□□□ -0.48
CELF1-219ENST00000539254 DACT2Q5SW24 774 aa12.06□□□□□ -0.48
CELF1-219ENST00000539254 DLK2Q6UY11 383 aa12.06□□□□□ -0.48
CELF1-219ENST00000539254 VPS37DQ86XT2 251 aa12.06□□□□□ -0.48
CELF1-219ENST00000539254 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
CELF1-219ENST00000539254 RCAN3Q9UKA8 241 aa12.06□□□□□ -0.48
CELF1-219ENST00000539254 SCAF8Q9UPN6 1271 aaKnown RBP12.06□□□□□ -0.48
CELF1-219ENST00000539254 ASTN2O75129 1339 aaPredicted RBP12.06□□□□□ -0.48
CELF1-219ENST00000539254 FRAT2O75474 233 aaPredicted RBP12.05□□□□□ -0.48
CELF1-219ENST00000539254 PDE8BO95263 885 aa12.05□□□□□ -0.48
CELF1-219ENST00000539254 USP17L8P0C7I0 530 aa12.05□□□□□ -0.48
CELF1-219ENST00000539254 HIBADHP31937 336 aaKnown RBP12.05□□□□□ -0.48
CELF1-219ENST00000539254 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
CELF1-219ENST00000539254 STRIP1Q5VSL9 837 aa12.05□□□□□ -0.48
CELF1-219ENST00000539254 USP48Q86UV5 1035 aa12.05□□□□□ -0.48
CELF1-219ENST00000539254 AGBL3Q8NEM8 1001 aa12.05□□□□□ -0.48
CELF1-219ENST00000539254 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
CELF1-219ENST00000539254 IRS2Q9Y4H2 1338 aa12.05□□□□□ -0.48
CELF1-219ENST00000539254 BCAMP50895 628 aa12.04□□□□□ -0.48
CELF1-219ENST00000539254 SCARF1Q14162 830 aa12.04□□□□□ -0.48
CELF1-219ENST00000539254 ATG9AQ7Z3C6 839 aa12.04□□□□□ -0.48
CELF1-219ENST00000539254 FAM84BQ96KN1 310 aaPredicted RBP12.04□□□□□ -0.48
CELF1-219ENST00000539254 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
CELF1-219ENST00000539254 PASKQ96RG2 1323 aa12.04□□□□□ -0.48
CELF1-219ENST00000539254 A0A1B0GUL6 1792 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 PNMA6EA0A0J9YXQ4 647 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 TMEM88BA6NKF7 163 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 ADM5C9JUS6 153 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 IFIT1P09914 478 aaKnown RBP12.03□□□□□ -0.48
CELF1-219ENST00000539254 GRM1Q13255 1194 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 CAVIN4Q5BKX8 364 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 C15orf52Q6ZUT6 534 aaKnown RBP12.03□□□□□ -0.48
CELF1-219ENST00000539254 OGFOD1Q8N543 542 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 DNAJC5GQ8N7S2 189 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 DCPSQ96C86 337 aaKnown RBP12.03□□□□□ -0.48
CELF1-219ENST00000539254 GMLQ99445 158 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 MYOZ2Q9NPC6 264 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 GGA3Q9NZ52 723 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 ABT1Q9ULW3 272 aaKnown RBP12.03□□□□□ -0.48
CELF1-219ENST00000539254 COG6Q9Y2V7 657 aa12.03□□□□□ -0.48
CELF1-219ENST00000539254 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.48
CELF1-219ENST00000539254 SASH1O94885 1247 aa12.02□□□□□ -0.49
CELF1-219ENST00000539254 SLC5A1P13866 664 aa12.02□□□□□ -0.49
CELF1-219ENST00000539254 IL1R1P14778 569 aa12.02□□□□□ -0.49
CELF1-219ENST00000539254 ZNF280AP59817 542 aaPredicted RBP12.02□□□□□ -0.49
CELF1-219ENST00000539254 PUM3Q15397 648 aaKnown RBP12.02□□□□□ -0.49
CELF1-219ENST00000539254 ANGEL2Q5VTE6 544 aaKnown RBP12.02□□□□□ -0.49
CELF1-219ENST00000539254 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.49
CELF1-219ENST00000539254 CDC37L1Q7L3B6 337 aa12.02□□□□□ -0.49
CELF1-219ENST00000539254 KRT26Q7Z3Y9 468 aa12.02□□□□□ -0.49
CELF1-219ENST00000539254 CERS5Q8N5B7 392 aa12.02□□□□□ -0.49
CELF1-219ENST00000539254 VGLL2Q8N8G2 317 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms