RNA–Protein interactions for RNA: ENST00000538907.1

PTPRO-207, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 4

Gene PTPRO, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-207ENST00000538907 ZAP70P43403 619 aa8.8□□□□□ -1
PTPRO-207ENST00000538907 GPR152Q8TDT2 470 aa8.8□□□□□ -1
PTPRO-207ENST00000538907 UTP4Q969X6 686 aaKnown RBP8.8□□□□□ -1
PTPRO-207ENST00000538907 KLHDC7BQ96G42 594 aa8.8□□□□□ -1
PTPRO-207ENST00000538907 SMNDC1O75940 238 aaKnown RBP eCLIP8.79□□□□□ -1
PTPRO-207ENST00000538907 RNF43Q68DV7 783 aa8.79□□□□□ -1
PTPRO-207ENST00000538907 CEP120Q8N960 986 aa8.79□□□□□ -1
PTPRO-207ENST00000538907 COL26A1Q96A83 441 aa8.79□□□□□ -1
PTPRO-207ENST00000538907 POP1Q99575 1024 aaKnown RBP8.79□□□□□ -1
PTPRO-207ENST00000538907 PBX4Q9BYU1 374 aa8.79□□□□□ -1
PTPRO-207ENST00000538907 CEP41Q9BYV8 373 aa8.79□□□□□ -1
PTPRO-207ENST00000538907 SCNN1AP37088 669 aa8.78□□□□□ -1
PTPRO-207ENST00000538907 DUOXA2Q1HG44 320 aa8.78□□□□□ -1
PTPRO-207ENST00000538907 TTC39BQ5VTQ0 682 aaPredicted RBP8.78□□□□□ -1
PTPRO-207ENST00000538907 SPACA7Q96KW9 195 aa8.78□□□□□ -1
PTPRO-207ENST00000538907 MYRFLQ96LU7 910 aa8.78□□□□□ -1
PTPRO-207ENST00000538907 KLHL23Q8NBE8 558 aa8.77□□□□□ -1.01
PTPRO-207ENST00000538907 CXXC1Q9P0U4 656 aaPredicted RBP8.77□□□□□ -1.01
PTPRO-207ENST00000538907 ACPPP15309 386 aa8.76□□□□□ -1.01
PTPRO-207ENST00000538907 SRPK2P78362 688 aaKnown RBP8.76□□□□□ -1.01
PTPRO-207ENST00000538907 ELOAQ14241 798 aaKnown RBP8.76□□□□□ -1.01
PTPRO-207ENST00000538907 UVSSAQ2YD98 709 aa8.76□□□□□ -1.01
PTPRO-207ENST00000538907 ADAM19Q9H013 955 aa8.76□□□□□ -1.01
PTPRO-207ENST00000538907 ABI2Q9NYB9 513 aaPredicted RBP8.76□□□□□ -1.01
PTPRO-207ENST00000538907 TXKP42681 527 aa8.75□□□□□ -1.01
PTPRO-207ENST00000538907 DTX1Q86Y01 620 aa8.75□□□□□ -1.01
PTPRO-207ENST00000538907 FAM20CQ8IXL6 584 aa8.75□□□□□ -1.01
PTPRO-207ENST00000538907 DBNDD2Q9BQY9 259 aa8.75□□□□□ -1.01
PTPRO-207ENST00000538907 FAM13BQ9NYF5 915 aa8.75□□□□□ -1.01
PTPRO-207ENST00000538907 TMEM63CQ9P1W3 806 aa8.75□□□□□ -1.01
PTPRO-207ENST00000538907 CNTN3Q9P232 1028 aa8.75□□□□□ -1.01
PTPRO-207ENST00000538907 SLAIN2Q9P270 581 aa8.75□□□□□ -1.01
PTPRO-207ENST00000538907 PREPP48147 710 aa8.74□□□□□ -1.01
PTPRO-207ENST00000538907 SHKBP1Q8TBC3 707 aa8.74□□□□□ -1.01
PTPRO-207ENST00000538907 FAM83CQ9BQN1 747 aa8.74□□□□□ -1.01
PTPRO-207ENST00000538907 ZMYND15Q9H091 742 aa8.74□□□□□ -1.01
PTPRO-207ENST00000538907 SEC31BQ9NQW1 1179 aa8.74□□□□□ -1.01
PTPRO-207ENST00000538907 KANSL3Q9P2N6 904 aa8.74□□□□□ -1.01
PTPRO-207ENST00000538907 FNDC3AQ9Y2H6 1198 aaKnown RBP8.74□□□□□ -1.01
PTPRO-207ENST00000538907 NFKBIEO00221 500 aa8.73□□□□□ -1.01
PTPRO-207ENST00000538907 TRPA1O75762 1119 aa8.73□□□□□ -1.01
PTPRO-207ENST00000538907 BMP3P12645 472 aa8.73□□□□□ -1.01
PTPRO-207ENST00000538907 HGSNATQ68CP4 663 aa8.73□□□□□ -1.01
PTPRO-207ENST00000538907 INTS5Q6P9B9 1019 aaKnown RBP8.73□□□□□ -1.01
PTPRO-207ENST00000538907 CLEC10AQ8IUN9 316 aa8.73□□□□□ -1.01
PTPRO-207ENST00000538907 STIM2Q9P246 746 aa8.73□□□□□ -1.01
PTPRO-207ENST00000538907 PTPRAP18433 802 aa8.72□□□□□ -1.01
PTPRO-207ENST00000538907 HOXA10P31260 410 aaPredicted RBP8.72□□□□□ -1.01
PTPRO-207ENST00000538907 FAM117BQ6P1L5 589 aa8.72□□□□□ -1.01
PTPRO-207ENST00000538907 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.72□□□□□ -1.01
PTPRO-207ENST00000538907 BEND4Q6ZU67 534 aa8.72□□□□□ -1.01
PTPRO-207ENST00000538907 NCAPG2Q86XI2 1143 aa8.72□□□□□ -1.01
PTPRO-207ENST00000538907 HHIPQ96QV1 700 aa8.72□□□□□ -1.01
PTPRO-207ENST00000538907 ELP3Q9H9T3 547 aa8.72□□□□□ -1.01
PTPRO-207ENST00000538907 SALL4Q9UJQ4 1053 aa8.72□□□□□ -1.01
PTPRO-207ENST00000538907 GRIK1P39086 918 aa8.71□□□□□ -1.02
PTPRO-207ENST00000538907 TMEM132AQ24JP5 1023 aa8.71□□□□□ -1.02
PTPRO-207ENST00000538907 TMEM164Q5U3C3 297 aa8.71□□□□□ -1.02
PTPRO-207ENST00000538907 ATCAYQ86WG3 371 aa8.71□□□□□ -1.02
PTPRO-207ENST00000538907 NUDT16Q96DE0 195 aaKnown RBP8.71□□□□□ -1.02
PTPRO-207ENST00000538907 RNF114Q9Y508 228 aa8.71□□□□□ -1.02
PTPRO-207ENST00000538907 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.7□□□□□ -1.02
PTPRO-207ENST00000538907 H3BRJ5 948 aa8.7□□□□□ -1.02
PTPRO-207ENST00000538907 NLRP12P59046 1061 aa8.7□□□□□ -1.02
PTPRO-207ENST00000538907 KCNF1Q9H3M0 494 aa8.7□□□□□ -1.02
PTPRO-207ENST00000538907 PIP4K2BP78356 416 aa8.69□□□□□ -1.02
PTPRO-207ENST00000538907 C1orf127Q8N9H9 656 aa8.69□□□□□ -1.02
PTPRO-207ENST00000538907 SEPT3Q9UH03 358 aa8.69□□□□□ -1.02
PTPRO-207ENST00000538907 ADGRE2Q9UHX3 823 aa8.69□□□□□ -1.02
PTPRO-207ENST00000538907 WDR64B1ANS9 1081 aa8.68□□□□□ -1.02
PTPRO-207ENST00000538907 WNT11O96014 354 aa8.68□□□□□ -1.02
PTPRO-207ENST00000538907 ANKRD34AQ69YU3 496 aa8.68□□□□□ -1.02
PTPRO-207ENST00000538907 PDE12Q6L8Q7 609 aaKnown RBP8.68□□□□□ -1.02
PTPRO-207ENST00000538907 SHISA5Q8N114 240 aa8.68□□□□□ -1.02
PTPRO-207ENST00000538907 RUSC1Q9BVN2 902 aa8.68□□□□□ -1.02
PTPRO-207ENST00000538907 OSGEPQ9NPF4 335 aa8.68□□□□□ -1.02
PTPRO-207ENST00000538907 DZANK1Q9NVP4 752 aa8.68□□□□□ -1.02
PTPRO-207ENST00000538907 A6NHS1 94 aa8.67□□□□□ -1.02
PTPRO-207ENST00000538907 SART1O43290 800 aaKnown RBP8.67□□□□□ -1.02
PTPRO-207ENST00000538907 YBX3P16989 372 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTPRO-207ENST00000538907 CLP1Q92989 425 aaKnown RBP8.67□□□□□ -1.02
PTPRO-207ENST00000538907 WNT8BQ93098 351 aa8.67□□□□□ -1.02
PTPRO-207ENST00000538907 MFSD14AQ96MC6 490 aa8.67□□□□□ -1.02
PTPRO-207ENST00000538907 RNF208Q9H0X6 261 aa8.67□□□□□ -1.02
PTPRO-207ENST00000538907 GGNBP2Q9H3C7 697 aa8.67□□□□□ -1.02
PTPRO-207ENST00000538907 ATG7O95352 703 aa8.66□□□□□ -1.02
PTPRO-207ENST00000538907 ZNF438Q7Z4V0 828 aa8.66□□□□□ -1.02
PTPRO-207ENST00000538907 ABTB2Q8N961 1025 aa8.66□□□□□ -1.02
PTPRO-207ENST00000538907 SLC7A3Q8WY07 619 aa8.66□□□□□ -1.02
PTPRO-207ENST00000538907 SOX13Q9UN79 622 aa8.66□□□□□ -1.02
PTPRO-207ENST00000538907 SGO2Q562F6 1265 aa8.65□□□□□ -1.02
PTPRO-207ENST00000538907 CHRDQ9H2X0 955 aa8.65□□□□□ -1.02
PTPRO-207ENST00000538907 MEGF11A6BM72 1044 aa8.64□□□□□ -1.03
PTPRO-207ENST00000538907 PDE2AO00408 941 aaPredicted RBP8.64□□□□□ -1.03
PTPRO-207ENST00000538907 MAP4P27816 1152 aaKnown RBP8.64□□□□□ -1.03
PTPRO-207ENST00000538907 CABP4P57796 275 aa8.64□□□□□ -1.03
PTPRO-207ENST00000538907 XKR5Q6UX68 686 aa8.64□□□□□ -1.03
PTPRO-207ENST00000538907 HIF3AQ9Y2N7 669 aa8.64□□□□□ -1.03
PTPRO-207ENST00000538907 SOX1O00570 391 aaPredicted RBP8.63□□□□□ -1.03
PTPRO-207ENST00000538907 DLGAP3O95886 979 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms