RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 CCDC186Q7Z3E2 898 aa14.08□□□□□ -0.16
CPNE8-203ENST00000538596 ZCRB1Q8TBF4 217 aaKnown RBP14.08□□□□□ -0.16
CPNE8-203ENST00000538596 DSCC1Q9BVC3 393 aa14.08□□□□□ -0.16
CPNE8-203ENST00000538596 GOLPH3LQ9H4A5 285 aa14.08□□□□□ -0.16
CPNE8-203ENST00000538596 SPATA31A3Q5VYP0 1347 aa14.08□□□□□ -0.16
CPNE8-203ENST00000538596 RNF113AO15541 343 aaKnown RBP14.08□□□□□ -0.16
CPNE8-203ENST00000538596 DRC7Q8IY82 874 aa14.08□□□□□ -0.16
CPNE8-203ENST00000538596 ERCC4Q92889 916 aaPredicted RBP14.08□□□□□ -0.16
CPNE8-203ENST00000538596 USP28Q96RU2 1077 aa14.08□□□□□ -0.16
CPNE8-203ENST00000538596 TRIM5Q9C035 493 aa14.08□□□□□ -0.16
CPNE8-203ENST00000538596 ZSCAN16Q9H4T2 348 aaPredicted RBP14.08□□□□□ -0.16
CPNE8-203ENST00000538596 CADPS2Q86UW7 1296 aa14.07□□□□□ -0.16
CPNE8-203ENST00000538596 RAB11FIP4Q86YS3 637 aa14.07□□□□□ -0.16
CPNE8-203ENST00000538596 TJP1Q07157 1748 aa14.07□□□□□ -0.16
CPNE8-203ENST00000538596 LAMB4A4D0S4 1761 aa14.07□□□□□ -0.16
CPNE8-203ENST00000538596 PDIA3P30101 505 aaKnown RBP14.07□□□□□ -0.16
CPNE8-203ENST00000538596 SCARF1Q14162 830 aa14.07□□□□□ -0.16
CPNE8-203ENST00000538596 OTUD7BQ6GQQ9 843 aa14.07□□□□□ -0.16
CPNE8-203ENST00000538596 PI16Q6UXB8 463 aa14.07□□□□□ -0.16
CPNE8-203ENST00000538596 CFAP45Q9UL16 551 aa14.07□□□□□ -0.16
CPNE8-203ENST00000538596 HMGB1P09429 215 aaKnown RBP14.06□□□□□ -0.16
CPNE8-203ENST00000538596 C11orf57Q6ZUT1 292 aaPredicted RBP14.06□□□□□ -0.16
CPNE8-203ENST00000538596 ILDR1Q86SU0 546 aaPredicted RBP14.06□□□□□ -0.16
CPNE8-203ENST00000538596 CCAR1Q8IX12 1150 aaKnown RBP14.06□□□□□ -0.16
CPNE8-203ENST00000538596 PRDM11Q9NQV5 511 aa14.06□□□□□ -0.16
CPNE8-203ENST00000538596 FOXP2O15409 715 aa14.06□□□□□ -0.16
CPNE8-203ENST00000538596 SYNE4Q8N205 404 aa14.06□□□□□ -0.16
CPNE8-203ENST00000538596 KLHL34Q8N239 644 aa14.06□□□□□ -0.16
CPNE8-203ENST00000538596 CCDC191Q8NCU4 936 aa14.06□□□□□ -0.16
CPNE8-203ENST00000538596 LLPHQ9BRT6 129 aaKnown RBP14.06□□□□□ -0.16
CPNE8-203ENST00000538596 GOLGA6L6A8MZA4 724 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 ZNF75DP51815 510 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 FBXW7Q969H0 707 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 FAM89AQ96GI7 184 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 AGXT2Q9BYV1 514 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 GPR108Q9NPR9 543 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 PCDH11XQ9BZA7 1347 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 PCDH11YQ9BZA8 1340 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 NUP188Q5SRE5 1749 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 WASHC4Q2M389 1173 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 PRIMPOLQ96LW4 560 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 FDPSP14324 419 aaKnown RBP14.05□□□□□ -0.16
CPNE8-203ENST00000538596 GORABQ5T7V8 394 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 NAA16Q6N069 864 aaPredicted RBP14.05□□□□□ -0.16
CPNE8-203ENST00000538596 PLA2G4DQ86XP0 818 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 ZNF710Q8N1W2 664 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 TDRD7Q8NHU6 1098 aaKnown RBP14.05□□□□□ -0.16
CPNE8-203ENST00000538596 XAGE2Q96GT9 111 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 GJB4Q9NTQ9 266 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 CEP126Q9P2H0 1117 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 RCOR1Q9UKL0 485 aa14.05□□□□□ -0.16
CPNE8-203ENST00000538596 SALL1Q9NSC2 1324 aa14.04□□□□□ -0.16
CPNE8-203ENST00000538596 SNW1Q13573 536 aaKnown RBP14.04□□□□□ -0.16
CPNE8-203ENST00000538596 CCDC57Q2TAC2 916 aa14.04□□□□□ -0.16
CPNE8-203ENST00000538596 BRINP3Q76B58 766 aa14.04□□□□□ -0.16
CPNE8-203ENST00000538596 KCPQ6ZWJ8 1503 aa14.04□□□□□ -0.16
CPNE8-203ENST00000538596 CCDC144BQ3MJ40 725 aa14.04□□□□□ -0.16
CPNE8-203ENST00000538596 TTC39AQ5SRH9 613 aa14.04□□□□□ -0.16
CPNE8-203ENST00000538596 CCDC144CPQ8IYA2 1237 aa14.04□□□□□ -0.16
CPNE8-203ENST00000538596 STRN4Q9NRL3 753 aa14.04□□□□□ -0.16
CPNE8-203ENST00000538596 WDR17Q8IZU2 1322 aa14.04□□□□□ -0.16
CPNE8-203ENST00000538596 ABCC6O95255 1503 aa14.03□□□□□ -0.16
CPNE8-203ENST00000538596 ME1P48163 572 aa14.03□□□□□ -0.16
CPNE8-203ENST00000538596 HMGN5P82970 282 aaKnown RBP14.03□□□□□ -0.16
CPNE8-203ENST00000538596 PUS7LQ9H0K6 701 aaKnown RBP14.03□□□□□ -0.16
CPNE8-203ENST00000538596 TAOK2Q9UL54 1235 aa14.03□□□□□ -0.16
CPNE8-203ENST00000538596 CPDO75976 1380 aa14.03□□□□□ -0.16
CPNE8-203ENST00000538596 ERVV-2B6SEH9 535 aa14.03□□□□□ -0.16
CPNE8-203ENST00000538596 TPM3P06753 285 aa14.03□□□□□ -0.16
CPNE8-203ENST00000538596 ZAP70P43403 619 aa14.03□□□□□ -0.16
CPNE8-203ENST00000538596 CARMIL3Q8ND23 1372 aa14.03□□□□□ -0.16
CPNE8-203ENST00000538596 CIAO1O76071 339 aa14.02□□□□□ -0.16
CPNE8-203ENST00000538596 FGAP02671 866 aa14.02□□□□□ -0.16
CPNE8-203ENST00000538596 ARID5BQ14865 1188 aa14.02□□□□□ -0.16
CPNE8-203ENST00000538596 IQCB1Q15051 598 aa14.02□□□□□ -0.16
CPNE8-203ENST00000538596 CLIP2Q9UDT6 1046 aa14.02□□□□□ -0.16
CPNE8-203ENST00000538596 DENND2AQ9ULE3 1009 aa14.02□□□□□ -0.16
CPNE8-203ENST00000538596 MYH15Q9Y2K3 1946 aa14.02□□□□□ -0.16
CPNE8-203ENST00000538596 RIOK3O14730 519 aaKnown RBP14.02□□□□□ -0.17
CPNE8-203ENST00000538596 POLR3DP05423 398 aaPredicted RBP14.02□□□□□ -0.17
CPNE8-203ENST00000538596 ZSCAN25Q6NSZ9 544 aa14.02□□□□□ -0.17
CPNE8-203ENST00000538596 FSIP1Q8NA03 581 aa14.02□□□□□ -0.17
CPNE8-203ENST00000538596 ZNF274Q96GC6 653 aaPredicted RBP14.02□□□□□ -0.17
CPNE8-203ENST00000538596 CCDC158Q5M9N0 1113 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 NKX2-3Q8TAU0 364 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 CACTINQ8WUQ7 758 aaKnown RBP14.01□□□□□ -0.17
CPNE8-203ENST00000538596 ISCA1Q9BUE6 129 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 SLAIN2Q9P270 581 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 NWD2Q9ULI1 1742 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 TCIRG1Q13488 830 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 ENGASEQ8NFI3 743 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 C16orf45Q96MC5 204 aaPredicted RBP14.01□□□□□ -0.17
CPNE8-203ENST00000538596 MAP7D2Q96T17 732 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 UBR2Q8IWV8 1755 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 A0A1B0GVL5 298 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 IL2RBP14784 551 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 GTF2F1P35269 517 aaKnown RBP eCLIP14.01□□□□□ -0.17
CPNE8-203ENST00000538596 TAF7LQ5H9L4 462 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 CCDC73Q6ZRK6 1079 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 ASAP1Q9ULH1 1129 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms