RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
GGA3-201ENST00000537686 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
GGA3-201ENST00000537686 F8W031 263 aaPredicted RBP11.62□□□□□ -0.55
GGA3-201ENST00000537686 A1BGP04217 495 aa11.62□□□□□ -0.55
GGA3-201ENST00000537686 AK2P54819 239 aa11.62□□□□□ -0.55
GGA3-201ENST00000537686 WDR78Q5VTH9 848 aa11.62□□□□□ -0.55
GGA3-201ENST00000537686 CPLX3Q8WVH0 158 aa11.62□□□□□ -0.55
GGA3-201ENST00000537686 KRT23Q9C075 422 aa11.62□□□□□ -0.55
GGA3-201ENST00000537686 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.62□□□□□ -0.553e-9■■■■■ 44.2
GGA3-201ENST00000537686 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
GGA3-201ENST00000537686 PRC1O43663 620 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 HLA-DOAP06340 250 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 HOXB7P09629 217 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 ST5P78524 1137 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 TXLNBQ8N3L3 684 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 UBXN4Q92575 508 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 CPS1P31327 1500 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 MYO5BQ9ULV0 1848 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 NBPF7P0C2Y1 421 aaPredicted RBP11.61□□□□□ -0.55
GGA3-201ENST00000537686 DNM1Q05193 864 aaKnown RBP11.61□□□□□ -0.55
GGA3-201ENST00000537686 RTN1Q16799 776 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 CREB3L3Q68CJ9 461 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 CCDC12Q8WUD4 166 aaPredicted RBP11.61□□□□□ -0.55
GGA3-201ENST00000537686 ZNF496Q96IT1 587 aaPredicted RBP11.61□□□□□ -0.55
GGA3-201ENST00000537686 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
GGA3-201ENST00000537686 CPA1P15085 419 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 TMTC2Q8N394 836 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 FER1L4A9Z1Z3 1794 aa11.61□□□□□ -0.55
GGA3-201ENST00000537686 SETQ01105 290 aaPredicted RBP11.6□□□□□ -0.55
GGA3-201ENST00000537686 TNIP1Q15025 636 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 MIGA1Q8NAN2 632 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 CNNM2Q9H8M5 875 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 RTCBQ9Y3I0 505 aaKnown RBP11.6□□□□□ -0.55
GGA3-201ENST00000537686 ADCY5O95622 1261 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 ENOX2Q16206 610 aaKnown RBP11.6□□□□□ -0.55
GGA3-201ENST00000537686 STX1AQ16623 288 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 IFIT1BQ5T764 474 aaKnown RBP11.6□□□□□ -0.55
GGA3-201ENST00000537686 CUL5Q93034 780 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 CABP5Q9NP86 173 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 BABAM1Q9NWV8 329 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 TRMT1Q9NXH9 659 aaKnown RBP11.6□□□□□ -0.55
GGA3-201ENST00000537686 MED14O60244 1454 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 PNMA6EA0A0J9YXQ4 647 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 RNF113AO15541 343 aaKnown RBP11.6□□□□□ -0.55
GGA3-201ENST00000537686 BRINP3Q76B58 766 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 CACNA2D4Q7Z3S7 1137 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 DBNDD2Q9BQY9 259 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 USP26Q9BXU7 913 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 DACT1Q9NYF0 836 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 ARHGEF28Q8N1W1 1705 aaKnown RBP11.6□□□□□ -0.55
GGA3-201ENST00000537686 USP19O94966 1318 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 SYKP43405 635 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 ZSCAN23Q3MJ62 389 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 FKBP15Q5T1M5 1219 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 USP48Q86UV5 1035 aa11.6□□□□□ -0.55
GGA3-201ENST00000537686 ZNF397Q8NF99 534 aaPredicted RBP11.6□□□□□ -0.55
GGA3-201ENST00000537686 SETD1BQ9UPS6 1966 aaKnown RBP11.59□□□□□ -0.55
GGA3-201ENST00000537686 EYA2O00167 538 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 PLBD2Q8NHP8 589 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 METTL22Q9BUU2 404 aaPredicted RBP11.59□□□□□ -0.55
GGA3-201ENST00000537686 ZC3H12CQ9C0D7 883 aaKnown RBP11.59□□□□□ -0.55
GGA3-201ENST00000537686 A0A1B0GUL7 405 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 URI1O94763 535 aaPredicted RBP11.59□□□□□ -0.55
GGA3-201ENST00000537686 F13A1P00488 732 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 MATR3P43243 847 aaKnown RBP eCLIP11.59□□□□□ -0.55
GGA3-201ENST00000537686 PAF1Q8N7H5 531 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 FBXO3Q9UK99 471 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 CCDC171Q6TFL3 1326 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 KIAA0232Q92628 1395 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 ERLIN1O75477 346 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 TSPY3P0CV98 308 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 TSPY8P0CW00 308 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 KIF18AQ8NI77 898 aa11.59□□□□□ -0.55
GGA3-201ENST00000537686 MARCKSP29966 332 aaPredicted RBP11.58□□□□□ -0.56
GGA3-201ENST00000537686 GSTO1P78417 241 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 APOBRQ0VD83 1088 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 DHX32Q7L7V1 743 aaKnown RBP11.58□□□□□ -0.56
GGA3-201ENST00000537686 C16orf45Q96MC5 204 aaPredicted RBP11.58□□□□□ -0.56
GGA3-201ENST00000537686 JAG2Q9Y219 1238 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 KIF2AO00139 706 aaPredicted RBP11.58□□□□□ -0.56
GGA3-201ENST00000537686 ZSCAN12O43309 604 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 TMC6Q7Z403 805 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 DNAJC10Q8IXB1 793 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 CALML4Q96GE6 196 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 KCNQ3O43525 872 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 MTIF2P46199 727 aaKnown RBP11.58□□□□□ -0.56
GGA3-201ENST00000537686 SPA17Q15506 151 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 KIF4BQ2VIQ3 1234 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 MAGEB6Q8N7X4 407 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 KCNG4Q8TDN1 519 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 TSG101Q99816 390 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 CD163L1Q9NR16 1453 aa11.58□□□□□ -0.56
GGA3-201ENST00000537686 CAVIN2O95810 425 aa11.57□□□□□ -0.56
GGA3-201ENST00000537686 CHMP4BP1P59074 171 aa11.57□□□□□ -0.56
GGA3-201ENST00000537686 SLC52A2Q9HAB3 445 aa11.57□□□□□ -0.56
GGA3-201ENST00000537686 WWC3Q9ULE0 1092 aa11.57□□□□□ -0.56
GGA3-201ENST00000537686 ERLIN2O94905 339 aa11.57□□□□□ -0.56
GGA3-201ENST00000537686 MRPS27Q92552 414 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms