RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 GSDMDP57764 484 aa14.23□□□□□ -0.13
CPSF7-218ENST00000537641 SCRN1Q12765 414 aa14.23□□□□□ -0.13
CPSF7-218ENST00000537641 DHX8Q14562 1220 aaKnown RBP14.23□□□□□ -0.13
CPSF7-218ENST00000537641 MCMDC2Q4G0Z9 681 aa14.23□□□□□ -0.13
CPSF7-218ENST00000537641 TNNI3KQ59H18 835 aa14.23□□□□□ -0.13
CPSF7-218ENST00000537641 ZNF397Q8NF99 534 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-218ENST00000537641 METTL22Q9BUU2 404 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-218ENST00000537641 SIL1Q9H173 461 aa14.23□□□□□ -0.13
CPSF7-218ENST00000537641 FPGT-TNNI3KV9GXZ4 949 aa14.23□□□□□ -0.13
CPSF7-218ENST00000537641 WDR17Q8IZU2 1322 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 BECN2A8MW95 431 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 KINO60870 393 aaKnown RBP14.22□□□□□ -0.13
CPSF7-218ENST00000537641 CABP4P57796 275 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 FAM160A1Q05DH4 1040 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 GCKRQ14397 625 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 PTPN14Q15678 1187 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 SLFNL1Q499Z3 407 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 LRP10Q7Z4F1 713 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 ERO1AQ96HE7 468 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 HAUS7Q99871 368 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 AGXT2Q9BYV1 514 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 MORC2Q9Y6X9 1032 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-218ENST00000537641 SHANK3Q9BYB0 1731 aa14.22□□□□□ -0.13
CPSF7-218ENST00000537641 CYP21A2P08686 494 aa14.21□□□□□ -0.13
CPSF7-218ENST00000537641 RFX5P48382 616 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-218ENST00000537641 CCZ1BP86790 482 aa14.21□□□□□ -0.13
CPSF7-218ENST00000537641 CCZ1P86791 482 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-218ENST00000537641 COPS6Q7L5N1 327 aa14.21□□□□□ -0.13
CPSF7-218ENST00000537641 CEP57L1Q8IYX8 460 aa14.21□□□□□ -0.13
CPSF7-218ENST00000537641 ENGASEQ8NFI3 743 aa14.21□□□□□ -0.13
CPSF7-218ENST00000537641 NAT10Q9H0A0 1025 aaKnown RBP14.21□□□□□ -0.13
CPSF7-218ENST00000537641 IMPACTQ9P2X3 320 aa14.21□□□□□ -0.13
CPSF7-218ENST00000537641 DBNLQ9UJU6 430 aaKnown RBP14.21□□□□□ -0.13
CPSF7-218ENST00000537641 SOS2Q07890 1332 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-218ENST00000537641 PCDH11XQ9BZA7 1347 aa14.21□□□□□ -0.13
CPSF7-218ENST00000537641 PCDH11YQ9BZA8 1340 aa14.21□□□□□ -0.13
CPSF7-218ENST00000537641 COL5A2P05997 1499 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-218ENST00000537641 CCDC69A6NI79 296 aa14.21□□□□□ -0.14
CPSF7-218ENST00000537641 RABL6Q3YEC7 729 aaPredicted RBP14.21□□□□□ -0.14
CPSF7-218ENST00000537641 ANKRD13DQ6ZTN6 518 aa14.21□□□□□ -0.14
CPSF7-218ENST00000537641 DHX32Q7L7V1 743 aaKnown RBP14.21□□□□□ -0.14
CPSF7-218ENST00000537641 DHX40Q8IX18 779 aaKnown RBP14.21□□□□□ -0.14
CPSF7-218ENST00000537641 GOLPH3LQ9H4A5 285 aa14.21□□□□□ -0.14
CPSF7-218ENST00000537641 USP16Q9Y5T5 823 aa14.21□□□□□ -0.14
CPSF7-218ENST00000537641 SALL1Q9NSC2 1324 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 SKILP12757 684 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 KCNJ6P48051 423 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 SNW1Q13573 536 aaKnown RBP14.2□□□□□ -0.14
CPSF7-218ENST00000537641 NUP188Q5SRE5 1749 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 TAF3Q5VWG9 929 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 DDX11Q96FC9 970 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 MYD88Q99836 296 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 BPIFA3Q9BQP9 254 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 DSCC1Q9BVC3 393 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 OSBPL5Q9H0X9 879 aaPredicted RBP14.2□□□□□ -0.14
CPSF7-218ENST00000537641 PRDM11Q9NQV5 511 aa14.2□□□□□ -0.14
CPSF7-218ENST00000537641 TUBB4AP04350 444 aa14.19□□□□□ -0.14
CPSF7-218ENST00000537641 FGD1P98174 961 aa14.19□□□□□ -0.14
CPSF7-218ENST00000537641 PTPN12Q05209 780 aaKnown RBP14.19□□□□□ -0.14
CPSF7-218ENST00000537641 EPHA10Q5JZY3 1008 aa14.19□□□□□ -0.14
CPSF7-218ENST00000537641 CCAR2Q8N163 923 aaKnown RBP14.19□□□□□ -0.14
CPSF7-218ENST00000537641 KBTBD3Q8NAB2 608 aa14.19□□□□□ -0.14
CPSF7-218ENST00000537641 KIF18AQ8NI77 898 aa14.19□□□□□ -0.14
CPSF7-218ENST00000537641 EDC3Q96F86 508 aaKnown RBP14.19□□□□□ -0.14
CPSF7-218ENST00000537641 USP28Q96RU2 1077 aa14.19□□□□□ -0.14
CPSF7-218ENST00000537641 HELLSQ9NRZ9 838 aa14.19□□□□□ -0.14
CPSF7-218ENST00000537641 NHSL1Q5SYE7 1610 aa14.19□□□□□ -0.14
CPSF7-218ENST00000537641 DDX60Q8IY21 1712 aaKnown RBP14.19□□□□□ -0.14
CPSF7-218ENST00000537641 A0A1W2PQ27 194 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 A0A1W2PQ64 194 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 A0A1W2PQD8 194 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 CTDNEP1O95476 244 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 FAM193AP78312 1265 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 TFCP2Q12800 502 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 STOX1Q6ZVD7 989 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 FSIP1Q8NA03 581 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 CCDC150Q8NCX0 1101 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 KLHDC4Q8TBB5 520 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 MRPS27Q92552 414 aaKnown RBP14.18□□□□□ -0.14
CPSF7-218ENST00000537641 SLAIN2Q9P270 581 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 ERVV-2B6SEH9 535 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 SLU7O95391 586 aaKnown RBP14.18□□□□□ -0.14
CPSF7-218ENST00000537641 EXOSC10Q01780 885 aaKnown RBP14.18□□□□□ -0.14
CPSF7-218ENST00000537641 CCDC129Q6ZRS4 1044 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 TOM1L2Q6ZVM7 507 aa14.18□□□□□ -0.14
CPSF7-218ENST00000537641 ZCRB1Q8TBF4 217 aaKnown RBP14.18□□□□□ -0.14
CPSF7-218ENST00000537641 ZNF274Q96GC6 653 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-218ENST00000537641 KCPQ6ZWJ8 1503 aa14.17□□□□□ -0.14
CPSF7-218ENST00000537641 USP27XA6NNY8 438 aa14.17□□□□□ -0.14
CPSF7-218ENST00000537641 CREBRFQ8IUR6 639 aa14.17□□□□□ -0.14
CPSF7-218ENST00000537641 KRT222Q8N1A0 295 aa14.17□□□□□ -0.14
CPSF7-218ENST00000537641 FBXL16Q8N461 479 aa14.17□□□□□ -0.14
CPSF7-218ENST00000537641 AOPEPQ8N6M6 819 aa14.17□□□□□ -0.14
CPSF7-218ENST00000537641 PLBD2Q8NHP8 589 aa14.17□□□□□ -0.14
CPSF7-218ENST00000537641 ZNF592Q92610 1267 aa14.17□□□□□ -0.14
CPSF7-218ENST00000537641 DNAJC2Q99543 621 aaKnown RBP14.17□□□□□ -0.14
CPSF7-218ENST00000537641 FAM53CQ9NYF3 392 aa14.17□□□□□ -0.14
CPSF7-218ENST00000537641 PSDA5PKW4 1024 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-218ENST00000537641 ARID5BQ14865 1188 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms