RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 MAP7D2Q96T17 732 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 CBX8Q9HC52 389 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 AKAP2Q9Y2D5 859 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 LAMA4Q16363 1823 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 SPEF2Q9C093 1822 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 KCPQ6ZWJ8 1503 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 IL2RBP14784 551 aa18.85■□□□□ 0.61
CHMP1A-202ENST00000535997 TCIRG1Q13488 830 aa18.85■□□□□ 0.61
CHMP1A-202ENST00000535997 CCDC158Q5M9N0 1113 aa18.85■□□□□ 0.61
CHMP1A-202ENST00000535997 LUZP1Q86V48 1076 aa18.85■□□□□ 0.61
CHMP1A-202ENST00000535997 KIAA1524Q8TCG1 905 aa18.85■□□□□ 0.61
CHMP1A-202ENST00000535997 CARD10Q9BWT7 1032 aa18.85■□□□□ 0.61
CHMP1A-202ENST00000535997 PUS3Q9BZE2 481 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-202ENST00000535997 CTNNA3Q9UI47 895 aa18.85■□□□□ 0.61
CHMP1A-202ENST00000535997 PTPDC1A2A3K4 754 aa18.84■□□□□ 0.61
CHMP1A-202ENST00000535997 ZFYP08048 801 aaPredicted RBP18.84■□□□□ 0.61
CHMP1A-202ENST00000535997 PDIA3P30101 505 aaKnown RBP18.84■□□□□ 0.61
CHMP1A-202ENST00000535997 EVCP57679 992 aa18.84■□□□□ 0.61
CHMP1A-202ENST00000535997 TJP1Q07157 1748 aa18.84■□□□□ 0.61
CHMP1A-202ENST00000535997 MYRIPQ8NFW9 859 aa18.84■□□□□ 0.61
CHMP1A-202ENST00000535997 SALL1Q9NSC2 1324 aa18.83■□□□□ 0.61
CHMP1A-202ENST00000535997 CTAGE5O15320 804 aa18.83■□□□□ 0.61
CHMP1A-202ENST00000535997 BRINP3Q76B58 766 aa18.83■□□□□ 0.61
CHMP1A-202ENST00000535997 TDRD7Q8NHU6 1098 aaKnown RBP18.83■□□□□ 0.61
CHMP1A-202ENST00000535997 ZNF165P49910 485 aa18.83■□□□□ 0.6
CHMP1A-202ENST00000535997 CCT2P78371 535 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-202ENST00000535997 FKBP4Q02790 459 aaKnown RBP eCLIP18.83■□□□□ 0.6
CHMP1A-202ENST00000535997 GORABQ5T7V8 394 aa18.83■□□□□ 0.6
CHMP1A-202ENST00000535997 MTERF4Q7Z6M4 381 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-202ENST00000535997 SPC24Q8NBT2 197 aa18.83■□□□□ 0.6
CHMP1A-202ENST00000535997 OSBP2Q969R2 916 aa18.83■□□□□ 0.6
CHMP1A-202ENST00000535997 ZNF396Q96N95 335 aaPredicted RBP18.83■□□□□ 0.6
CHMP1A-202ENST00000535997 KCNF1Q9H3M0 494 aa18.83■□□□□ 0.6
CHMP1A-202ENST00000535997 FAM13BQ9NYF5 915 aa18.83■□□□□ 0.6
CHMP1A-202ENST00000535997 RBM10P98175 930 aaKnown RBP18.82■□□□□ 0.6
CHMP1A-202ENST00000535997 PLA2G12BQ9BX93 195 aa18.82■□□□□ 0.6
CHMP1A-202ENST00000535997 TNS2Q63HR2 1409 aa18.82■□□□□ 0.6
CHMP1A-202ENST00000535997 M0R2C6 588 aa18.81■□□□□ 0.6
CHMP1A-202ENST00000535997 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-202ENST00000535997 XAGE2Q96GT9 111 aa18.81■□□□□ 0.6
CHMP1A-202ENST00000535997 TEX13AQ9BXU3 409 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-202ENST00000535997 TTC39AQ5SRH9 613 aa18.81■□□□□ 0.6
CHMP1A-202ENST00000535997 COL5A2P05997 1499 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-202ENST00000535997 PAPPAQ13219 1627 aa18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 A0A0G2JLW4 131 aa18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 PCCAP05165 728 aaPredicted RBP18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 CSF1RP07333 972 aa18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 CEBPZQ03701 1054 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 C17orf53Q8N3J3 647 aaPredicted RBP18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 NCOA5Q9HCD5 579 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 IMMTQ16891 758 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 TTLL5Q6EMB2 1281 aa18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 PLA2G4DQ86XP0 818 aa18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 CCAR1Q8IX12 1150 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-202ENST00000535997 VSIG10Q8N0Z9 540 aa18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 TRIM5Q9C035 493 aa18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 SOS2Q07890 1332 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 ABCC12Q96J65 1359 aa18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 IFIT5Q13325 482 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 CHST3Q7LGC8 479 aa18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 ZBTB38Q8NAP3 1195 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 USP28Q96RU2 1077 aa18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 DNAJC25Q9H1X3 360 aa18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 NAP1L2Q9ULW6 460 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-202ENST00000535997 DHX16O60231 1041 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-202ENST00000535997 FGAP02671 866 aa18.78■□□□□ 0.6
CHMP1A-202ENST00000535997 ZNF75DP51815 510 aa18.78■□□□□ 0.6
CHMP1A-202ENST00000535997 SNW1Q13573 536 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-202ENST00000535997 WASHC4Q2M389 1173 aa18.78■□□□□ 0.6
CHMP1A-202ENST00000535997 TMOD3Q9NYL9 352 aa18.78■□□□□ 0.6
CHMP1A-202ENST00000535997 PYCARDQ9ULZ3 195 aa18.78■□□□□ 0.6
CHMP1A-202ENST00000535997 ADORA1P30542 326 aa18.77■□□□□ 0.6
CHMP1A-202ENST00000535997 CCDC73Q6ZRK6 1079 aa18.77■□□□□ 0.6
CHMP1A-202ENST00000535997 APPBP2Q92624 585 aa18.77■□□□□ 0.6
CHMP1A-202ENST00000535997 CARMIL3Q8ND23 1372 aa18.77■□□□□ 0.6
CHMP1A-202ENST00000535997 FDPSP14324 419 aaKnown RBP18.77■□□□□ 0.6
CHMP1A-202ENST00000535997 TAF7LQ5H9L4 462 aa18.77■□□□□ 0.6
CHMP1A-202ENST00000535997 KIF6Q6ZMV9 814 aa18.77■□□□□ 0.6
CHMP1A-202ENST00000535997 ENGASEQ8NFI3 743 aa18.77■□□□□ 0.6
CHMP1A-202ENST00000535997 FAM89AQ96GI7 184 aa18.77■□□□□ 0.6
CHMP1A-202ENST00000535997 MYH15Q9Y2K3 1946 aa18.77■□□□□ 0.59
CHMP1A-202ENST00000535997 FOXP2O15409 715 aa18.76■□□□□ 0.59
CHMP1A-202ENST00000535997 PTGS1P23219 599 aa18.76■□□□□ 0.59
CHMP1A-202ENST00000535997 FAM160A1Q05DH4 1040 aa18.76■□□□□ 0.59
CHMP1A-202ENST00000535997 CCDC186Q7Z3E2 898 aa18.76■□□□□ 0.59
CHMP1A-202ENST00000535997 DRC7Q8IY82 874 aa18.76■□□□□ 0.59
CHMP1A-202ENST00000535997 KINO60870 393 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-202ENST00000535997 EVA1CP58658 441 aa18.76■□□□□ 0.59
CHMP1A-202ENST00000535997 IQCB1Q15051 598 aa18.76■□□□□ 0.59
CHMP1A-202ENST00000535997 STARD3NLO95772 234 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 STX1AQ16623 288 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 ILDR1Q86SU0 546 aaPredicted RBP18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 FTOQ9C0B1 505 aaKnown RBP eCLIP18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 RTEL1Q9NZ71 1219 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 GOLGA6L19H0YKK7 550 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 CDC25BP30305 580 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 ZAP70P43403 619 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 ME1P48163 572 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 FOSBP53539 338 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms