RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 MXD3Q9BW11 206 aa20.66■□□□□ 0.9
ATL3-202ENST00000535789 CREBZFQ9NS37 354 aa20.66■□□□□ 0.9
ATL3-202ENST00000535789 PGAP2Q9UHJ9 254 aa20.66■□□□□ 0.9
ATL3-202ENST00000535789 ZBED9Q6R2W3 1325 aa20.66■□□□□ 0.9
ATL3-202ENST00000535789 RPS12P25398 132 aaKnown RBP20.65■□□□□ 0.9
ATL3-202ENST00000535789 RSBN1LQ6PCB5 846 aaPredicted RBP20.65■□□□□ 0.9
ATL3-202ENST00000535789 PODNQ7Z5L7 613 aa20.65■□□□□ 0.9
ATL3-202ENST00000535789 KLHDC4Q8TBB5 520 aa20.65■□□□□ 0.9
ATL3-202ENST00000535789 ASTN2O75129 1339 aaPredicted RBP20.64■□□□□ 0.89
ATL3-202ENST00000535789 KIF16BQ96L93 1317 aa20.64■□□□□ 0.89
ATL3-202ENST00000535789 TBC1D10BQ4KMP7 808 aaPredicted RBP20.64■□□□□ 0.89
ATL3-202ENST00000535789 DACT2Q5SW24 774 aa20.64■□□□□ 0.89
ATL3-202ENST00000535789 LDHAL6AQ6ZMR3 332 aa20.64■□□□□ 0.89
ATL3-202ENST00000535789 JMYQ8N9B5 988 aa20.64■□□□□ 0.89
ATL3-202ENST00000535789 TRIM27P14373 513 aa20.63■□□□□ 0.89
ATL3-202ENST00000535789 RFX5P48382 616 aaPredicted RBP20.63■□□□□ 0.89
ATL3-202ENST00000535789 LRRC24Q50LG9 513 aa20.63■□□□□ 0.89
ATL3-202ENST00000535789 DLK2Q6UY11 383 aa20.63■□□□□ 0.89
ATL3-202ENST00000535789 C15orf52Q6ZUT6 534 aaKnown RBP20.63■□□□□ 0.89
ATL3-202ENST00000535789 GLIS2Q9BZE0 524 aaPredicted RBP20.63■□□□□ 0.89
ATL3-202ENST00000535789 API5Q9BZZ5 524 aaKnown RBP20.63■□□□□ 0.89
ATL3-202ENST00000535789 COA1Q9GZY4 146 aa20.63■□□□□ 0.89
ATL3-202ENST00000535789 RIPOR2Q9Y4F9 1068 aa20.63■□□□□ 0.89
ATL3-202ENST00000535789 CNTNAP1P78357 1384 aa20.62■□□□□ 0.89
ATL3-202ENST00000535789 USP17L3A6NCW0 530 aa20.62■□□□□ 0.89
ATL3-202ENST00000535789 USP17L4A6NCW7 530 aa20.62■□□□□ 0.89
ATL3-202ENST00000535789 G3V3G9 751 aa20.62■□□□□ 0.89
ATL3-202ENST00000535789 ZNF280AP59817 542 aaPredicted RBP20.62■□□□□ 0.89
ATL3-202ENST00000535789 DCAF8Q5TAQ9 597 aa20.62■□□□□ 0.89
ATL3-202ENST00000535789 USP17L1Q7RTZ2 530 aa20.62■□□□□ 0.89
ATL3-202ENST00000535789 MEIS3Q99687 375 aa20.62■□□□□ 0.89
ATL3-202ENST00000535789 TMEM88BA6NKF7 163 aa20.61■□□□□ 0.89
ATL3-202ENST00000535789 H7C1D1 291 aa20.61■□□□□ 0.89
ATL3-202ENST00000535789 TAF7LQ5H9L4 462 aa20.61■□□□□ 0.89
ATL3-202ENST00000535789 VGLL2Q8N8G2 317 aa20.61■□□□□ 0.89
ATL3-202ENST00000535789 AGBL3Q8NEM8 1001 aa20.61■□□□□ 0.89
ATL3-202ENST00000535789 ARHGAP45Q92619 1136 aa20.61■□□□□ 0.89
ATL3-202ENST00000535789 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
ATL3-202ENST00000535789 CNNM1Q9NRU3 951 aa20.61■□□□□ 0.89
ATL3-202ENST00000535789 MKRN1Q9UHC7 482 aaKnown RBP20.61■□□□□ 0.89
ATL3-202ENST00000535789 KCNJ4P48050 445 aa20.6■□□□□ 0.89
ATL3-202ENST00000535789 KIF4BQ2VIQ3 1234 aa20.6■□□□□ 0.89
ATL3-202ENST00000535789 CST9Q5W186 159 aa20.6■□□□□ 0.89
ATL3-202ENST00000535789 INTS3Q68E01 1043 aaKnown RBP20.6■□□□□ 0.89
ATL3-202ENST00000535789 CD209Q9NNX6 404 aa20.6■□□□□ 0.89
ATL3-202ENST00000535789 PLIN1O60240 522 aa20.59■□□□□ 0.89
ATL3-202ENST00000535789 RBM26Q5T8P6 1007 aaKnown RBP20.59■□□□□ 0.89
ATL3-202ENST00000535789 ZC3H15Q8WU90 426 aaKnown RBP20.59■□□□□ 0.89
ATL3-202ENST00000535789 STRIP1Q5VSL9 837 aa20.58■□□□□ 0.89
ATL3-202ENST00000535789 CERS5Q8N5B7 392 aa20.58■□□□□ 0.89
ATL3-202ENST00000535789 LRRFIP2Q9Y608 721 aaKnown RBP20.58■□□□□ 0.89
ATL3-202ENST00000535789 UBTFL1P0CB47 393 aaPredicted RBP20.57■□□□□ 0.88
ATL3-202ENST00000535789 IL1R1P14778 569 aa20.57■□□□□ 0.88
ATL3-202ENST00000535789 PTPN12Q05209 780 aaKnown RBP20.57■□□□□ 0.88
ATL3-202ENST00000535789 ATF7IPQ6VMQ6 1270 aa20.57■□□□□ 0.88
ATL3-202ENST00000535789 GTF2IP78347 998 aa20.56■□□□□ 0.88
ATL3-202ENST00000535789 FBXW7Q969H0 707 aa20.56■□□□□ 0.88
ATL3-202ENST00000535789 GGA3Q9NZ52 723 aa20.56■□□□□ 0.88
ATL3-202ENST00000535789 MROH5Q6ZUA9 1318 aa20.55■□□□□ 0.88
ATL3-202ENST00000535789 RASSF10A6NK89 507 aa20.55■□□□□ 0.88
ATL3-202ENST00000535789 ADM5C9JUS6 153 aa20.55■□□□□ 0.88
ATL3-202ENST00000535789 USP17L8P0C7I0 530 aa20.55■□□□□ 0.88
ATL3-202ENST00000535789 GYG1P46976 350 aa20.55■□□□□ 0.88
ATL3-202ENST00000535789 UBE4AQ14139 1066 aa20.55■□□□□ 0.88
ATL3-202ENST00000535789 ATG9AQ7Z3C6 839 aa20.55■□□□□ 0.88
ATL3-202ENST00000535789 FRAT1Q92837 279 aaPredicted RBP20.55■□□□□ 0.88
ATL3-202ENST00000535789 CLUAP1Q96AJ1 413 aa20.55■□□□□ 0.88
ATL3-202ENST00000535789 MYOZ2Q9NPC6 264 aa20.55■□□□□ 0.88
ATL3-202ENST00000535789 JAG2Q9Y219 1238 aa20.55■□□□□ 0.88
ATL3-202ENST00000535789 TTLL5Q6EMB2 1281 aa20.54■□□□□ 0.88
ATL3-202ENST00000535789 USP48Q86UV5 1035 aa20.54■□□□□ 0.88
ATL3-202ENST00000535789 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
ATL3-202ENST00000535789 MYO3BQ8WXR4 1341 aa20.53■□□□□ 0.88
ATL3-202ENST00000535789 VEGFBP49765 207 aa20.53■□□□□ 0.88
ATL3-202ENST00000535789 CDC37L1Q7L3B6 337 aa20.53■□□□□ 0.88
ATL3-202ENST00000535789 ZNF804AQ7Z570 1209 aa20.53■□□□□ 0.88
ATL3-202ENST00000535789 FAM84BQ96KN1 310 aaPredicted RBP20.53■□□□□ 0.88
ATL3-202ENST00000535789 SCAF8Q9UPN6 1271 aaKnown RBP20.53■□□□□ 0.88
ATL3-202ENST00000535789 PAPPA2Q9BXP8 1791 aa20.53■□□□□ 0.88
ATL3-202ENST00000535789 EYA2O00167 538 aa20.52■□□□□ 0.88
ATL3-202ENST00000535789 CELF2O95319 508 aaKnown RBP20.52■□□□□ 0.88
ATL3-202ENST00000535789 RLBP1P12271 317 aa20.52■□□□□ 0.88
ATL3-202ENST00000535789 FGFR2P21802 821 aa20.52■□□□□ 0.88
ATL3-202ENST00000535789 SCARF1Q14162 830 aa20.52■□□□□ 0.88
ATL3-202ENST00000535789 NBPF9Q3BBW0 867 aa20.52■□□□□ 0.88
ATL3-202ENST00000535789 METTL24Q5JXM2 366 aa20.52■□□□□ 0.88
ATL3-202ENST00000535789 KIAA0825Q8IV33 1275 aa20.52■□□□□ 0.88
ATL3-202ENST00000535789 TMEM57Q8N5G2 664 aa20.52■□□□□ 0.88
ATL3-202ENST00000535789 ZBED3Q96IU2 234 aaPredicted RBP20.52■□□□□ 0.88
ATL3-202ENST00000535789 PA2G4Q9UQ80 394 aaKnown RBP20.52■□□□□ 0.88
ATL3-202ENST00000535789 PCDHAC2Q9Y5I4 1007 aa20.52■□□□□ 0.88
ATL3-202ENST00000535789 OTOFQ9HC10 1997 aa20.52■□□□□ 0.87
ATL3-202ENST00000535789 AOX1Q06278 1338 aa20.52■□□□□ 0.87
ATL3-202ENST00000535789 SASH1O94885 1247 aa20.51■□□□□ 0.87
ATL3-202ENST00000535789 PDE8BO95263 885 aa20.51■□□□□ 0.87
ATL3-202ENST00000535789 ANGEL2Q5VTE6 544 aaKnown RBP20.51■□□□□ 0.87
ATL3-202ENST00000535789 KRT26Q7Z3Y9 468 aa20.51■□□□□ 0.87
ATL3-202ENST00000535789 TDRD7Q8NHU6 1098 aaKnown RBP20.51■□□□□ 0.87
ATL3-202ENST00000535789 TLL2Q9Y6L7 1015 aa20.51■□□□□ 0.87
ATL3-202ENST00000535789 WNT10BO00744 389 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms