RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ARL4DP49703 201 aa5.26□□□□□ -1.57
SNHG1-202ENST00000535689 DAB2P98082 770 aa5.26□□□□□ -1.57
SNHG1-202ENST00000535689 PTPN12Q05209 780 aaKnown RBP5.26□□□□□ -1.57
SNHG1-202ENST00000535689 TBC1D8BQ0IIM8 1120 aa5.26□□□□□ -1.57
SNHG1-202ENST00000535689 C1orf127Q8N9H9 656 aa5.26□□□□□ -1.57
SNHG1-202ENST00000535689 ZSCAN1Q8NBB4 408 aa5.26□□□□□ -1.57
SNHG1-202ENST00000535689 FOXD4L4Q8WXT5 416 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-202ENST00000535689 MRRFQ96E11 262 aaKnown RBP5.26□□□□□ -1.57
SNHG1-202ENST00000535689 SLC30A3Q99726 388 aa5.26□□□□□ -1.57
SNHG1-202ENST00000535689 CEP44Q9C0F1 390 aa5.26□□□□□ -1.57
SNHG1-202ENST00000535689 DNAJB12Q9NXW2 375 aaKnown RBP5.26□□□□□ -1.57
SNHG1-202ENST00000535689 VTI1BQ9UEU0 232 aa5.26□□□□□ -1.57
SNHG1-202ENST00000535689 PTPRAP18433 802 aa5.25□□□□□ -1.57
SNHG1-202ENST00000535689 ADH7P40394 386 aa5.25□□□□□ -1.57
SNHG1-202ENST00000535689 ORC1Q13415 861 aa5.25□□□□□ -1.57
SNHG1-202ENST00000535689 PWP1Q13610 501 aa5.25□□□□□ -1.57
SNHG1-202ENST00000535689 GAS6Q14393 721 aa5.25□□□□□ -1.57
SNHG1-202ENST00000535689 HP1BP3Q5SSJ5 553 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-202ENST00000535689 FAM35AQ86V20 835 aa5.25□□□□□ -1.57
SNHG1-202ENST00000535689 TMEM102Q8N9M5 508 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-202ENST00000535689 WHAMMQ8TF30 809 aa5.25□□□□□ -1.57
SNHG1-202ENST00000535689 DUSP9Q99956 384 aaKnown RBP5.25□□□□□ -1.57
SNHG1-202ENST00000535689 C12orf49Q9H741 205 aa5.25□□□□□ -1.57
SNHG1-202ENST00000535689 SRA1Q9HD15 236 aaKnown RBP5.25□□□□□ -1.57
SNHG1-202ENST00000535689 STRN4Q9NRL3 753 aa5.25□□□□□ -1.57
SNHG1-202ENST00000535689 METTL5Q9NRN9 209 aaKnown RBP5.25□□□□□ -1.57
SNHG1-202ENST00000535689 FOXD3Q9UJU5 478 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-202ENST00000535689 PPM1HQ9ULR3 514 aa5.25□□□□□ -1.57
SNHG1-202ENST00000535689 WIZO95785 1651 aa5.24□□□□□ -1.57
SNHG1-202ENST00000535689 A6NHS1 94 aa5.24□□□□□ -1.57
SNHG1-202ENST00000535689 EREGO14944 169 aa5.24□□□□□ -1.57
SNHG1-202ENST00000535689 PCBP4P57723 403 aaKnown RBP5.24□□□□□ -1.57
SNHG1-202ENST00000535689 PPP2R3AQ06190 1150 aa5.24□□□□□ -1.57
SNHG1-202ENST00000535689 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.24□□□□□ -1.572e-12■■□□□ 11.6
SNHG1-202ENST00000535689 RPS26P11Q5JNZ5 115 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-202ENST00000535689 MAP4K3Q8IVH8 894 aa5.24□□□□□ -1.57
SNHG1-202ENST00000535689 CRELD1Q96HD1 420 aa5.24□□□□□ -1.57
SNHG1-202ENST00000535689 OSMRQ99650 979 aa5.24□□□□□ -1.57
SNHG1-202ENST00000535689 PBX4Q9BYU1 374 aa5.24□□□□□ -1.57
SNHG1-202ENST00000535689 LIN7BQ9HAP6 207 aa5.24□□□□□ -1.57
SNHG1-202ENST00000535689 ZNF608Q9ULD9 1512 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-202ENST00000535689 NEURL1BA8MQ27 555 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 SCAMP3O14828 347 aaKnown RBP5.23□□□□□ -1.57
SNHG1-202ENST00000535689 LILRB5O75023 590 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 BCRP11274 1271 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 AMPD1P23109 780 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 ST13P50502 369 aaKnown RBP5.23□□□□□ -1.57
SNHG1-202ENST00000535689 PRPF40BQ6NWY9 871 aaKnown RBP5.23□□□□□ -1.57
SNHG1-202ENST00000535689 DTHD1Q6ZMT9 781 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 ANKRD24Q8TF21 1146 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 EDARADDQ8WWZ3 215 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 WNT8BQ93098 351 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 NPHS2Q9NP85 383 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 CNTN3Q9P232 1028 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 ZFATQ9P243 1243 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 GGA1Q9UJY5 639 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 SLC6A14Q9UN76 642 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 SYNJ1O43426 1573 aa5.23□□□□□ -1.57
SNHG1-202ENST00000535689 EIF4G3O43432 1585 aaKnown RBP5.22□□□□□ -1.57
SNHG1-202ENST00000535689 PDE2AO00408 941 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-202ENST00000535689 ADAMTS2O95450 1211 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 LMNB1P20700 586 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 GRNP28799 593 aaKnown RBP5.22□□□□□ -1.57
SNHG1-202ENST00000535689 CEP135Q66GS9 1140 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 CEP120Q8N960 986 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 TMEM87AQ8NBN3 555 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 GALNT6Q8NCL4 622 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 NEDD1Q8NHV4 660 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 BSNDQ8WZ55 320 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 PLD4Q96BZ4 506 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 NSUN5Q96P11 429 aaKnown RBP5.22□□□□□ -1.57
SNHG1-202ENST00000535689 BCO2Q9BYV7 579 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 CHRDQ9H2X0 955 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 DZANK1Q9NVP4 752 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 KANSL3Q9P2N6 904 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 TOPBP1Q92547 1522 aa5.22□□□□□ -1.57
SNHG1-202ENST00000535689 AQRO60306 1485 aaKnown RBP eCLIP5.21□□□□□ -1.583e-14■■■■■ 50.7
SNHG1-202ENST00000535689 A0A1W2PP55 124 aa5.21□□□□□ -1.58
SNHG1-202ENST00000535689 OIP5O43482 229 aa5.21□□□□□ -1.58
SNHG1-202ENST00000535689 SLURP2P0DP57 97 aa5.21□□□□□ -1.58
SNHG1-202ENST00000535689 EPXP11678 715 aa5.21□□□□□ -1.58
SNHG1-202ENST00000535689 CPB1P15086 417 aa5.21□□□□□ -1.58
SNHG1-202ENST00000535689 TAF1CQ15572 869 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-202ENST00000535689 ZNF385CQ66K41 422 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-202ENST00000535689 PODNQ7Z5L7 613 aa5.21□□□□□ -1.58
SNHG1-202ENST00000535689 CCNJLQ8IV13 435 aa5.21□□□□□ -1.58
SNHG1-202ENST00000535689 BHLHE41Q9C0J9 482 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-202ENST00000535689 WDR97A6NE52 1622 aa5.21□□□□□ -1.58
SNHG1-202ENST00000535689 TMEM238LA0A1B0GVL6 79 aa5.2□□□□□ -1.58
SNHG1-202ENST00000535689 C2CD2LO14523 706 aa5.2□□□□□ -1.58
SNHG1-202ENST00000535689 CDC27P30260 824 aa5.2□□□□□ -1.58
SNHG1-202ENST00000535689 GNL2Q13823 731 aaKnown RBP5.2□□□□□ -1.58
SNHG1-202ENST00000535689 PSAPL1Q6NUJ1 521 aa5.2□□□□□ -1.58
SNHG1-202ENST00000535689 RAB44Q7Z6P3 723 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-202ENST00000535689 WFDC8Q8IUA0 241 aa5.2□□□□□ -1.58
SNHG1-202ENST00000535689 DTWD1Q8N5C7 304 aa5.2□□□□□ -1.58
SNHG1-202ENST00000535689 RNF34Q969K3 372 aa5.2□□□□□ -1.58
SNHG1-202ENST00000535689 NXPE3Q969Y0 559 aa5.2□□□□□ -1.58
SNHG1-202ENST00000535689 EMILIN2Q9BXX0 1053 aa5.2□□□□□ -1.58
SNHG1-202ENST00000535689 SMG9Q9H0W8 520 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms