RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 IFNKQ9P0W0 207 aa16.28■□□□□ 0.2
LPCAT3-203ENST00000535479 A0A0G2JS52 829 aa16.28■□□□□ 0.2
LPCAT3-203ENST00000535479 RFX5P48382 616 aaPredicted RBP16.28■□□□□ 0.2
LPCAT3-203ENST00000535479 ANKRD1Q15327 319 aa16.28■□□□□ 0.2
LPCAT3-203ENST00000535479 TDRD7Q8NHU6 1098 aaKnown RBP16.28■□□□□ 0.2
LPCAT3-203ENST00000535479 SENP2Q9HC62 589 aa16.28■□□□□ 0.2
LPCAT3-203ENST00000535479 ARHGEF25Q86VW2 580 aa16.27■□□□□ 0.2
LPCAT3-203ENST00000535479 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.2
LPCAT3-203ENST00000535479 PAG1Q9NWQ8 432 aa16.27■□□□□ 0.2
LPCAT3-203ENST00000535479 CMTR1Q8N1G2 835 aaKnown RBP16.27■□□□□ 0.19
LPCAT3-203ENST00000535479 OSBP2Q969R2 916 aa16.27■□□□□ 0.19
LPCAT3-203ENST00000535479 PXDNLA1KZ92 1463 aa16.27■□□□□ 0.19
LPCAT3-203ENST00000535479 KIF28PB7ZC32 967 aa16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 HSPD1P10809 573 aaKnown RBP16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 FDPSP14324 419 aaKnown RBP16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 SYT10Q6XYQ8 523 aa16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 PHKBQ93100 1093 aa16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 CGNQ9P2M7 1197 aaKnown RBP16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 PTPN14Q15678 1187 aa16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 KMT5BQ4FZB7 885 aa16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 ANKRD7Q92527 254 aa16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 XPO4Q9C0E2 1151 aaKnown RBP16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 AGLP35573 1532 aa16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 KAT6BQ8WYB5 2073 aa16.26■□□□□ 0.19
LPCAT3-203ENST00000535479 COBLO75128 1261 aa16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 PDIA3P30101 505 aaKnown RBP16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 ERCC6LQ2NKX8 1250 aa16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 MTERF4Q7Z6M4 381 aaKnown RBP16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 CLIC6Q96NY7 704 aa16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 HIP1O00291 1037 aa16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 IFIT1P09914 478 aaKnown RBP16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 ATP5JP18859 108 aa16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 STK38Q15208 465 aa16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 MAST3O60307 1309 aa16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 ELP1O95163 1332 aa16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
LPCAT3-203ENST00000535479 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 KLF18A0A0U1RQI7 1052 aa16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 FBXO38Q6PIJ6 1188 aa16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 DHX32Q7L7V1 743 aaKnown RBP16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 DPF2Q92785 391 aa16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 GOLGA8BA8MQT2 603 aa16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 CYP27B1O15528 508 aa16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 APPP05067 770 aa16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 CCZ1BP86790 482 aa16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 CCZ1P86791 482 aaPredicted RBP16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 ZFP91Q96JP5 570 aaPredicted RBP16.24■□□□□ 0.19
LPCAT3-203ENST00000535479 LTN1O94822 1766 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 FOXN1O15353 648 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 GPTP24298 496 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 STX1AQ16623 288 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 NBPF11Q86T75 865 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 FAM89AQ96GI7 184 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 CTNNA3Q9UI47 895 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 CFAP45Q9UL16 551 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 A0A1B0GUL7 405 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 NBPF26B4DH59 902 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 NBPF14Q5TI25 921 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 NBPF10Q6P3W6 841 aaKnown RBP16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 HELBQ8NG08 1087 aaPredicted RBP16.23■□□□□ 0.19
LPCAT3-203ENST00000535479 SMTNL1A8MU46 457 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 CTIFO43310 598 aaKnown RBP16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 HOXB7P09629 217 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 ZNF827Q17R98 1081 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 KBTBD3Q8NAB2 608 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 PUS7LQ9H0K6 701 aaKnown RBP16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 ATG9AQ7Z3C6 839 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 HOMER1Q86YM7 354 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 HAUS7Q99871 368 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 ZSWIM4Q9H7M6 989 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 BABAM1Q9NWV8 329 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 TMEM232C9JQI7 657 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 CABP4P57796 275 aa16.22■□□□□ 0.19
LPCAT3-203ENST00000535479 PFKFB2O60825 505 aa16.21■□□□□ 0.19
LPCAT3-203ENST00000535479 PHKG2P15735 406 aa16.21■□□□□ 0.19
LPCAT3-203ENST00000535479 PNOCQ13519 176 aa16.21■□□□□ 0.19
LPCAT3-203ENST00000535479 ARMCX5Q6P1M9 558 aa16.21■□□□□ 0.19
LPCAT3-203ENST00000535479 MICU3Q86XE3 530 aa16.21■□□□□ 0.19
LPCAT3-203ENST00000535479 KCNH5Q8NCM2 988 aa16.21■□□□□ 0.19
LPCAT3-203ENST00000535479 HMG20BQ9P0W2 317 aa16.21■□□□□ 0.19
LPCAT3-203ENST00000535479 ORC3Q9UBD5 711 aaPredicted RBP16.21■□□□□ 0.19
LPCAT3-203ENST00000535479 GRAMD1CQ8IYS0 662 aa16.21■□□□□ 0.18
LPCAT3-203ENST00000535479 ZKSCAN3Q9BRR0 538 aa16.21■□□□□ 0.18
LPCAT3-203ENST00000535479 PALLDQ8WX93 1383 aa16.2■□□□□ 0.18
LPCAT3-203ENST00000535479 MROH7-TTC4A0A0A0MT08 1334 aa16.2■□□□□ 0.18
LPCAT3-203ENST00000535479 EPB41L2O43491 1005 aaKnown RBP16.2■□□□□ 0.18
LPCAT3-203ENST00000535479 ZAP70P43403 619 aa16.2■□□□□ 0.18
LPCAT3-203ENST00000535479 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
LPCAT3-203ENST00000535479 CARMIL3Q8ND23 1372 aa16.2■□□□□ 0.18
LPCAT3-203ENST00000535479 CPLX1O14810 134 aa16.2■□□□□ 0.18
LPCAT3-203ENST00000535479 WDHD1O75717 1129 aaPredicted RBP16.2■□□□□ 0.18
LPCAT3-203ENST00000535479 FAM160A1Q05DH4 1040 aa16.2■□□□□ 0.18
LPCAT3-203ENST00000535479 USPL1Q5W0Q7 1092 aa16.2■□□□□ 0.18
LPCAT3-203ENST00000535479 PDILTQ8N807 584 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms