RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 HNRNPUQ00839 825 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDCA3-204ENST00000535406 CHRNDQ07001 517 aa11.9□□□□□ -0.5
CDCA3-204ENST00000535406 DPF2Q92785 391 aa11.9□□□□□ -0.5
CDCA3-204ENST00000535406 KCNQ5Q9NR82 932 aa11.9□□□□□ -0.5
CDCA3-204ENST00000535406 CNOT7Q9UIV1 285 aaKnown RBP11.9□□□□□ -0.5
CDCA3-204ENST00000535406 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
CDCA3-204ENST00000535406 ZNF609O15014 1411 aa11.9□□□□□ -0.5
CDCA3-204ENST00000535406 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.5
CDCA3-204ENST00000535406 KIF16BQ96L93 1317 aa11.9□□□□□ -0.5
CDCA3-204ENST00000535406 SHTN1A0MZ66 631 aa11.89□□□□□ -0.51
CDCA3-204ENST00000535406 WTIPA6NIX2 430 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-204ENST00000535406 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
CDCA3-204ENST00000535406 TRPM4Q8TD43 1214 aa11.89□□□□□ -0.51
CDCA3-204ENST00000535406 TMEM88BA6NKF7 163 aa11.88□□□□□ -0.51
CDCA3-204ENST00000535406 VIL1P09327 827 aaKnown RBP11.88□□□□□ -0.51
CDCA3-204ENST00000535406 RARSP54136 660 aaKnown RBP11.88□□□□□ -0.51
CDCA3-204ENST00000535406 KAZALD1Q96I82 304 aa11.88□□□□□ -0.51
CDCA3-204ENST00000535406 BICC1Q9H694 974 aaKnown RBP11.88□□□□□ -0.51
CDCA3-204ENST00000535406 CNNM1Q9NRU3 951 aa11.88□□□□□ -0.51
CDCA3-204ENST00000535406 NOB1Q9ULX3 412 aaKnown RBP11.88□□□□□ -0.51
CDCA3-204ENST00000535406 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
CDCA3-204ENST00000535406 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
CDCA3-204ENST00000535406 KLRK1P26718 216 aa11.87□□□□□ -0.51
CDCA3-204ENST00000535406 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
CDCA3-204ENST00000535406 RSBN1LQ6PCB5 846 aaPredicted RBP11.87□□□□□ -0.51
CDCA3-204ENST00000535406 LDHAL6AQ6ZMR3 332 aa11.87□□□□□ -0.51
CDCA3-204ENST00000535406 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
CDCA3-204ENST00000535406 AGBL3Q8NEM8 1001 aa11.87□□□□□ -0.51
CDCA3-204ENST00000535406 ZC3H15Q8WU90 426 aaKnown RBP11.87□□□□□ -0.51
CDCA3-204ENST00000535406 ZNF594Q96JF6 807 aaPredicted RBP11.87□□□□□ -0.51
CDCA3-204ENST00000535406 API5Q9BZZ5 524 aaKnown RBP11.87□□□□□ -0.51
CDCA3-204ENST00000535406 COA1Q9GZY4 146 aa11.87□□□□□ -0.51
CDCA3-204ENST00000535406 ZNF646O15015 1829 aaPredicted RBP11.87□□□□□ -0.51
CDCA3-204ENST00000535406 TRPM7Q96QT4 1865 aa11.87□□□□□ -0.51
CDCA3-204ENST00000535406 TAF5LO75529 589 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 HIRAP54198 1017 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-204ENST00000535406 KIF4BQ2VIQ3 1234 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 RABL6Q3YEC7 729 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-204ENST00000535406 TBC1D10BQ4KMP7 808 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-204ENST00000535406 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 TXNRD3Q86VQ6 643 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 JMYQ8N9B5 988 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 HELBQ8NG08 1087 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-204ENST00000535406 FBXW7Q969H0 707 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 USP44Q9H0E7 712 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 MKRN1Q9UHC7 482 aaKnown RBP11.86□□□□□ -0.51
CDCA3-204ENST00000535406 PCNTO95613 3336 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 CNTNAP1P78357 1384 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 TRAF5O00463 557 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 EGFRP00533 1210 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 ANKRD44Q8N8A2 993 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 PGAP2Q9UHJ9 254 aa11.86□□□□□ -0.51
CDCA3-204ENST00000535406 MYO3BQ8WXR4 1341 aa11.85□□□□□ -0.51
CDCA3-204ENST00000535406 SNAP23O00161 211 aa11.85□□□□□ -0.51
CDCA3-204ENST00000535406 PLIN1O60240 522 aa11.85□□□□□ -0.51
CDCA3-204ENST00000535406 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-204ENST00000535406 FMR1Q06787 632 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDCA3-204ENST00000535406 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
CDCA3-204ENST00000535406 STRIP1Q5VSL9 837 aa11.85□□□□□ -0.51
CDCA3-204ENST00000535406 C15orf52Q6ZUT6 534 aaKnown RBP11.85□□□□□ -0.51
CDCA3-204ENST00000535406 ZNF804AQ7Z570 1209 aa11.85□□□□□ -0.51
CDCA3-204ENST00000535406 GLIS2Q9BZE0 524 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-204ENST00000535406 ABT1Q9ULW3 272 aaKnown RBP11.85□□□□□ -0.51
CDCA3-204ENST00000535406 ZBED9Q6R2W3 1325 aa11.84□□□□□ -0.51
CDCA3-204ENST00000535406 IRS2Q9Y4H2 1338 aa11.84□□□□□ -0.51
CDCA3-204ENST00000535406 USP17L8P0C7I0 530 aa11.84□□□□□ -0.51
CDCA3-204ENST00000535406 ZNF280AP59817 542 aaPredicted RBP11.84□□□□□ -0.51
CDCA3-204ENST00000535406 DACT2Q5SW24 774 aa11.84□□□□□ -0.51
CDCA3-204ENST00000535406 CDC37L1Q7L3B6 337 aa11.84□□□□□ -0.51
CDCA3-204ENST00000535406 ARHGAP45Q92619 1136 aa11.84□□□□□ -0.51
CDCA3-204ENST00000535406 GMLQ99445 158 aa11.84□□□□□ -0.51
CDCA3-204ENST00000535406 MROH5Q6ZUA9 1318 aa11.83□□□□□ -0.52
CDCA3-204ENST00000535406 RASSF10A6NK89 507 aa11.83□□□□□ -0.52
CDCA3-204ENST00000535406 IPO8O15397 1037 aaKnown RBP11.83□□□□□ -0.52
CDCA3-204ENST00000535406 CELF2O95319 508 aaKnown RBP11.83□□□□□ -0.52
CDCA3-204ENST00000535406 TTLL5Q6EMB2 1281 aa11.83□□□□□ -0.52
CDCA3-204ENST00000535406 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
CDCA3-204ENST00000535406 FRAT1Q92837 279 aaPredicted RBP11.83□□□□□ -0.52
CDCA3-204ENST00000535406 DCPSQ96C86 337 aaKnown RBP11.83□□□□□ -0.52
CDCA3-204ENST00000535406 MXD3Q9BW11 206 aa11.83□□□□□ -0.52
CDCA3-204ENST00000535406 PUS3Q9BZE2 481 aaKnown RBP11.83□□□□□ -0.52
CDCA3-204ENST00000535406 ZNF408Q9H9D4 720 aa11.83□□□□□ -0.52
CDCA3-204ENST00000535406 CD209Q9NNX6 404 aa11.83□□□□□ -0.52
CDCA3-204ENST00000535406 MYOZ2Q9NPC6 264 aa11.83□□□□□ -0.52
CDCA3-204ENST00000535406 GGA3Q9NZ52 723 aa11.83□□□□□ -0.52
CDCA3-204ENST00000535406 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
CDCA3-204ENST00000535406 BCAR3O75815 825 aa11.82□□□□□ -0.52
CDCA3-204ENST00000535406 GTF2IP78347 998 aa11.82□□□□□ -0.52
CDCA3-204ENST00000535406 UBE4AQ14139 1066 aa11.82□□□□□ -0.52
CDCA3-204ENST00000535406 METTL24Q5JXM2 366 aa11.82□□□□□ -0.52
CDCA3-204ENST00000535406 CST9Q5W186 159 aa11.82□□□□□ -0.52
CDCA3-204ENST00000535406 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
CDCA3-204ENST00000535406 KRT26Q7Z3Y9 468 aa11.82□□□□□ -0.52
CDCA3-204ENST00000535406 KLHDC4Q8TBB5 520 aa11.82□□□□□ -0.52
CDCA3-204ENST00000535406 HDAC5Q9UQL6 1122 aa11.82□□□□□ -0.52
CDCA3-204ENST00000535406 RIPOR2Q9Y4F9 1068 aa11.82□□□□□ -0.52
CDCA3-204ENST00000535406 TRIM27P14373 513 aa11.81□□□□□ -0.52
CDCA3-204ENST00000535406 IL1R1P14778 569 aa11.81□□□□□ -0.52
CDCA3-204ENST00000535406 VEGFBP49765 207 aa11.81□□□□□ -0.52
CDCA3-204ENST00000535406 DEFB115Q30KQ5 88 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms