RNA–Protein interactions for RNA: ENST00000535239.5

MSRB3-205, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-205ENST00000535239 STRIP1Q5VSL9 837 aa19.27■□□□□ 0.68
MSRB3-205ENST00000535239 ZNF594Q96JF6 807 aaPredicted RBP19.27■□□□□ 0.68
MSRB3-205ENST00000535239 A0A1B0GUL6 1792 aa19.27■□□□□ 0.67
MSRB3-205ENST00000535239 KIF16BQ96L93 1317 aa19.26■□□□□ 0.67
MSRB3-205ENST00000535239 HNRNPUQ00839 825 aaKnown RBP eCLIP19.26■□□□□ 0.67
MSRB3-205ENST00000535239 TAF7LQ5H9L4 462 aa19.26■□□□□ 0.67
MSRB3-205ENST00000535239 DACT2Q5SW24 774 aa19.26■□□□□ 0.67
MSRB3-205ENST00000535239 SAMD7Q7Z3H4 446 aa19.26■□□□□ 0.67
MSRB3-205ENST00000535239 RIPOR2Q9Y4F9 1068 aa19.26■□□□□ 0.67
MSRB3-205ENST00000535239 PCNTO95613 3336 aa19.26■□□□□ 0.67
MSRB3-205ENST00000535239 ZNF646O15015 1829 aaPredicted RBP19.25■□□□□ 0.67
MSRB3-205ENST00000535239 CNTNAP1P78357 1384 aa19.25■□□□□ 0.67
MSRB3-205ENST00000535239 TAF5LO75529 589 aa19.25■□□□□ 0.67
MSRB3-205ENST00000535239 KLRK1P26718 216 aa19.25■□□□□ 0.67
MSRB3-205ENST00000535239 CDC37L1Q7L3B6 337 aa19.25■□□□□ 0.67
MSRB3-205ENST00000535239 CNNM1Q9NRU3 951 aa19.25■□□□□ 0.67
MSRB3-205ENST00000535239 MYO3BQ8WXR4 1341 aa19.25■□□□□ 0.67
MSRB3-205ENST00000535239 RASSF10A6NK89 507 aa19.24■□□□□ 0.67
MSRB3-205ENST00000535239 EGFRP00533 1210 aa19.24■□□□□ 0.67
MSRB3-205ENST00000535239 KCNJ4P48050 445 aa19.24■□□□□ 0.67
MSRB3-205ENST00000535239 UBE4AQ14139 1066 aa19.24■□□□□ 0.67
MSRB3-205ENST00000535239 TBC1D10BQ4KMP7 808 aaPredicted RBP19.24■□□□□ 0.67
MSRB3-205ENST00000535239 CST9Q5W186 159 aa19.24■□□□□ 0.67
MSRB3-205ENST00000535239 HELBQ8NG08 1087 aaPredicted RBP19.24■□□□□ 0.67
MSRB3-205ENST00000535239 CD209Q9NNX6 404 aa19.24■□□□□ 0.67
MSRB3-205ENST00000535239 TRPM7Q96QT4 1865 aa19.24■□□□□ 0.67
MSRB3-205ENST00000535239 SNAP23O00161 211 aa19.23■□□□□ 0.67
MSRB3-205ENST00000535239 USP17L8P0C7I0 530 aa19.23■□□□□ 0.67
MSRB3-205ENST00000535239 IL1R1P14778 569 aa19.23■□□□□ 0.67
MSRB3-205ENST00000535239 INTS3Q68E01 1043 aaKnown RBP19.23■□□□□ 0.67
MSRB3-205ENST00000535239 HDAC5Q9UQL6 1122 aa19.23■□□□□ 0.67
MSRB3-205ENST00000535239 MROH5Q6ZUA9 1318 aa19.23■□□□□ 0.67
MSRB3-205ENST00000535239 TRAF5O00463 557 aa19.22■□□□□ 0.67
MSRB3-205ENST00000535239 FMR1Q06787 632 aaKnown RBP eCLIP19.22■□□□□ 0.67
MSRB3-205ENST00000535239 KIF4BQ2VIQ3 1234 aa19.22■□□□□ 0.67
MSRB3-205ENST00000535239 TTLL5Q6EMB2 1281 aa19.22■□□□□ 0.67
MSRB3-205ENST00000535239 GLIS2Q9BZE0 524 aaPredicted RBP19.22■□□□□ 0.67
MSRB3-205ENST00000535239 PUS3Q9BZE2 481 aaKnown RBP19.22■□□□□ 0.67
MSRB3-205ENST00000535239 ZBED9Q6R2W3 1325 aa19.22■□□□□ 0.67
MSRB3-205ENST00000535239 IPO8O15397 1037 aaKnown RBP19.21■□□□□ 0.67
MSRB3-205ENST00000535239 DEFB115Q30KQ5 88 aa19.21■□□□□ 0.67
MSRB3-205ENST00000535239 MKRN1Q9UHC7 482 aaKnown RBP19.21■□□□□ 0.67
MSRB3-205ENST00000535239 RFX5P48382 616 aaPredicted RBP19.2■□□□□ 0.66
MSRB3-205ENST00000535239 FKBP1AP62942 108 aaKnown RBP19.2■□□□□ 0.66
MSRB3-205ENST00000535239 ZNF804AQ7Z570 1209 aa19.2■□□□□ 0.66
MSRB3-205ENST00000535239 MYOZ2Q9NPC6 264 aa19.2■□□□□ 0.66
MSRB3-205ENST00000535239 UBTFL1P0CB47 393 aaPredicted RBP19.19■□□□□ 0.66
MSRB3-205ENST00000535239 RBM26Q5T8P6 1007 aaKnown RBP19.19■□□□□ 0.66
MSRB3-205ENST00000535239 ATF7IPQ6VMQ6 1270 aa19.19■□□□□ 0.66
MSRB3-205ENST00000535239 VGLL2Q8N8G2 317 aa19.19■□□□□ 0.66
MSRB3-205ENST00000535239 DCPSQ96C86 337 aaKnown RBP19.19■□□□□ 0.66
MSRB3-205ENST00000535239 FBXO3Q9UK99 471 aa19.19■□□□□ 0.66
MSRB3-205ENST00000535239 TLL2Q9Y6L7 1015 aa19.19■□□□□ 0.66
MSRB3-205ENST00000535239 POLR2AP24928 1970 aaKnown RBP19.19■□□□□ 0.66
MSRB3-205ENST00000535239 PLIN1O60240 522 aa19.18■□□□□ 0.66
MSRB3-205ENST00000535239 BCAR3O75815 825 aa19.18■□□□□ 0.66
MSRB3-205ENST00000535239 GTF2IP78347 998 aa19.18■□□□□ 0.66
MSRB3-205ENST00000535239 LRRC24Q50LG9 513 aa19.18■□□□□ 0.66
MSRB3-205ENST00000535239 KRT26Q7Z3Y9 468 aa19.18■□□□□ 0.66
MSRB3-205ENST00000535239 USP48Q86UV5 1035 aa19.18■□□□□ 0.66
MSRB3-205ENST00000535239 OGFOD1Q8N543 542 aa19.18■□□□□ 0.66
MSRB3-205ENST00000535239 HHIPL1Q96JK4 782 aa19.18■□□□□ 0.66
MSRB3-205ENST00000535239 PITPNM2Q9BZ72 1349 aa19.18■□□□□ 0.66
MSRB3-205ENST00000535239 SASH1O94885 1247 aa19.17■□□□□ 0.66
MSRB3-205ENST00000535239 PDE8BO95263 885 aa19.17■□□□□ 0.66
MSRB3-205ENST00000535239 TRIM27P14373 513 aa19.17■□□□□ 0.66
MSRB3-205ENST00000535239 VEGFBP49765 207 aa19.17■□□□□ 0.66
MSRB3-205ENST00000535239 PTPN12Q05209 780 aaKnown RBP19.17■□□□□ 0.66
MSRB3-205ENST00000535239 SCARF1Q14162 830 aa19.17■□□□□ 0.66
MSRB3-205ENST00000535239 TDRD7Q8NHU6 1098 aaKnown RBP19.17■□□□□ 0.66
MSRB3-205ENST00000535239 FAM84BQ96KN1 310 aaPredicted RBP19.17■□□□□ 0.66
MSRB3-205ENST00000535239 MXD3Q9BW11 206 aa19.17■□□□□ 0.66
MSRB3-205ENST00000535239 FAM205AQ6ZU69 1335 aa19.17■□□□□ 0.66
MSRB3-205ENST00000535239 CELF2O95319 508 aaKnown RBP19.16■□□□□ 0.66
MSRB3-205ENST00000535239 SAPCD2Q86UD0 394 aa19.16■□□□□ 0.66
MSRB3-205ENST00000535239 GGA3Q9NZ52 723 aa19.16■□□□□ 0.66
MSRB3-205ENST00000535239 ABT1Q9ULW3 272 aaKnown RBP19.16■□□□□ 0.66
MSRB3-205ENST00000535239 EYA2O00167 538 aa19.15■□□□□ 0.66
MSRB3-205ENST00000535239 GNAI3P08754 354 aa19.15■□□□□ 0.66
MSRB3-205ENST00000535239 HIBADHP31937 336 aaKnown RBP19.15■□□□□ 0.66
MSRB3-205ENST00000535239 FBXO33Q7Z6M2 555 aa19.15■□□□□ 0.66
MSRB3-205ENST00000535239 KLHDC4Q8TBB5 520 aa19.15■□□□□ 0.66
MSRB3-205ENST00000535239 ZBED3Q96IU2 234 aaPredicted RBP19.15■□□□□ 0.66
MSRB3-205ENST00000535239 MEIS3Q99687 375 aa19.15■□□□□ 0.66
MSRB3-205ENST00000535239 WNT10BO00744 389 aa19.14■□□□□ 0.65
MSRB3-205ENST00000535239 FGFR2P21802 821 aa19.14■□□□□ 0.65
MSRB3-205ENST00000535239 METTL24Q5JXM2 366 aa19.14■□□□□ 0.65
MSRB3-205ENST00000535239 SULF1Q8IWU6 871 aa19.14■□□□□ 0.65
MSRB3-205ENST00000535239 CERS5Q8N5B7 392 aa19.14■□□□□ 0.65
MSRB3-205ENST00000535239 MTMR14Q8NCE2 650 aa19.14■□□□□ 0.65
MSRB3-205ENST00000535239 FBXW7Q969H0 707 aa19.14■□□□□ 0.65
MSRB3-205ENST00000535239 HDAC9Q9UKV0 1011 aa19.14■□□□□ 0.65
MSRB3-205ENST00000535239 ASTN2O75129 1339 aaPredicted RBP19.14■□□□□ 0.65
MSRB3-205ENST00000535239 CIAO1O76071 339 aa19.13■□□□□ 0.65
MSRB3-205ENST00000535239 MTX1Q13505 466 aa19.13■□□□□ 0.65
MSRB3-205ENST00000535239 ANGEL2Q5VTE6 544 aaKnown RBP19.13■□□□□ 0.65
MSRB3-205ENST00000535239 ATG9AQ7Z3C6 839 aa19.13■□□□□ 0.65
MSRB3-205ENST00000535239 LRRFIP2Q9Y608 721 aaKnown RBP19.13■□□□□ 0.65
MSRB3-205ENST00000535239 WDR33Q9C0J8 1336 aaKnown RBP19.13■□□□□ 0.65
MSRB3-205ENST00000535239 ADM5C9JUS6 153 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms