RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 PTPN18Q99952 460 aa14.22□□□□□ -0.13
VAMP1-204ENST00000535180 FZD1Q9UP38 647 aa14.22□□□□□ -0.13
VAMP1-204ENST00000535180 VCANP13611 3396 aa14.21□□□□□ -0.13
VAMP1-204ENST00000535180 TESPA1A2RU30 521 aaPredicted RBP14.21□□□□□ -0.13
VAMP1-204ENST00000535180 USP17L3A6NCW0 530 aa14.21□□□□□ -0.13
VAMP1-204ENST00000535180 USP17L4A6NCW7 530 aa14.21□□□□□ -0.13
VAMP1-204ENST00000535180 USP17L1Q7RTZ2 530 aa14.21□□□□□ -0.13
VAMP1-204ENST00000535180 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.21□□□□□ -0.13
VAMP1-204ENST00000535180 NKX2-3Q8TAU0 364 aa14.21□□□□□ -0.13
VAMP1-204ENST00000535180 PNISRQ8TF01 805 aaKnown RBP14.21□□□□□ -0.13
VAMP1-204ENST00000535180 CLMNQ96JQ2 1002 aa14.21□□□□□ -0.13
VAMP1-204ENST00000535180 THUMPD2Q9BTF0 503 aaKnown RBP14.21□□□□□ -0.13
VAMP1-204ENST00000535180 PRDM6Q9NQX0 595 aa14.21□□□□□ -0.13
VAMP1-204ENST00000535180 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.21□□□□□ -0.13
VAMP1-204ENST00000535180 ALPK3Q96L96 1907 aa14.2□□□□□ -0.14
VAMP1-204ENST00000535180 UFL1O94874 794 aa14.2□□□□□ -0.14
VAMP1-204ENST00000535180 RPS8P62241 208 aaKnown RBP14.2□□□□□ -0.14
VAMP1-204ENST00000535180 PODNQ7Z5L7 613 aa14.2□□□□□ -0.14
VAMP1-204ENST00000535180 APOBEC3FQ8IUX4 373 aaKnown RBP14.2□□□□□ -0.14
VAMP1-204ENST00000535180 OGFOD1Q8N543 542 aa14.2□□□□□ -0.14
VAMP1-204ENST00000535180 COL1A1P02452 1464 aaPredicted RBP14.19□□□□□ -0.14
VAMP1-204ENST00000535180 PDIA6Q15084 440 aa14.19□□□□□ -0.14
VAMP1-204ENST00000535180 Q7L0L9 218 aa14.19□□□□□ -0.14
VAMP1-204ENST00000535180 MTMR10Q9NXD2 777 aa14.19□□□□□ -0.14
VAMP1-204ENST00000535180 ANKIB1Q9P2G1 1089 aa14.19□□□□□ -0.14
VAMP1-204ENST00000535180 GGA1Q9UJY5 639 aa14.19□□□□□ -0.14
VAMP1-204ENST00000535180 OTOFQ9HC10 1997 aa14.19□□□□□ -0.14
VAMP1-204ENST00000535180 PPP1R12BO60237 982 aaPredicted RBP14.18□□□□□ -0.14
VAMP1-204ENST00000535180 GJA5P36382 358 aa14.18□□□□□ -0.14
VAMP1-204ENST00000535180 MMP14P50281 582 aa14.18□□□□□ -0.14
VAMP1-204ENST00000535180 MTFR1Q15390 333 aa14.18□□□□□ -0.14
VAMP1-204ENST00000535180 STAP2Q9UGK3 403 aa14.18□□□□□ -0.14
VAMP1-204ENST00000535180 SPTBN5Q9NRC6 3674 aaKnown RBP14.17□□□□□ -0.14
VAMP1-204ENST00000535180 SASH1O94885 1247 aa14.17□□□□□ -0.14
VAMP1-204ENST00000535180 GNRH1P01148 92 aa14.17□□□□□ -0.14
VAMP1-204ENST00000535180 GJA8P48165 433 aa14.17□□□□□ -0.14
VAMP1-204ENST00000535180 CC2D1BQ5T0F9 858 aaKnown RBP14.17□□□□□ -0.14
VAMP1-204ENST00000535180 ZFYVE28Q9HCC9 887 aa14.17□□□□□ -0.14
VAMP1-204ENST00000535180 PRMT2P55345 433 aa14.16□□□□□ -0.14
VAMP1-204ENST00000535180 EIF4G2P78344 907 aaKnown RBP eCLIP14.16□□□□□ -0.14
VAMP1-204ENST00000535180 PROSER3Q2NL68 480 aa14.16□□□□□ -0.14
VAMP1-204ENST00000535180 DACT2Q5SW24 774 aa14.16□□□□□ -0.14
VAMP1-204ENST00000535180 DEFB129Q9H1M3 183 aa14.16□□□□□ -0.14
VAMP1-204ENST00000535180 SSC5DA1L4H1 1573 aa14.16□□□□□ -0.14
VAMP1-204ENST00000535180 MYO3BQ8WXR4 1341 aa14.15□□□□□ -0.14
VAMP1-204ENST00000535180 PER1O15534 1290 aaPredicted RBP14.15□□□□□ -0.14
VAMP1-204ENST00000535180 EVI5O60447 810 aa14.15□□□□□ -0.14
VAMP1-204ENST00000535180 GJB1P08034 283 aa14.15□□□□□ -0.14
VAMP1-204ENST00000535180 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
VAMP1-204ENST00000535180 BMP8BP34820 402 aa14.15□□□□□ -0.14
VAMP1-204ENST00000535180 TAF1CQ15572 869 aaPredicted RBP14.15□□□□□ -0.14
VAMP1-204ENST00000535180 COPS6Q7L5N1 327 aa14.15□□□□□ -0.14
VAMP1-204ENST00000535180 FAM89AQ96GI7 184 aa14.15□□□□□ -0.14
VAMP1-204ENST00000535180 MXD3Q9BW11 206 aa14.15□□□□□ -0.14
VAMP1-204ENST00000535180 ANXA1P04083 346 aa14.14□□□□□ -0.15
VAMP1-204ENST00000535180 KIF22Q14807 665 aa14.14□□□□□ -0.15
VAMP1-204ENST00000535180 ZNF428Q96B54 188 aa14.14□□□□□ -0.15
VAMP1-204ENST00000535180 ZBED3Q96IU2 234 aaPredicted RBP14.14□□□□□ -0.15
VAMP1-204ENST00000535180 MS4A4AQ96JQ5 239 aa14.14□□□□□ -0.15
VAMP1-204ENST00000535180 ARHGAP39Q9C0H5 1083 aa14.14□□□□□ -0.15
VAMP1-204ENST00000535180 IREB2P48200 963 aaKnown RBP14.13□□□□□ -0.15
VAMP1-204ENST00000535180 LACTBP83111 547 aaPredicted RBP14.13□□□□□ -0.15
VAMP1-204ENST00000535180 LRIT3Q3SXY7 679 aa14.13□□□□□ -0.15
VAMP1-204ENST00000535180 ANKRD13AQ8IZ07 590 aa14.13□□□□□ -0.15
VAMP1-204ENST00000535180 PPP2R3BQ9Y5P8 575 aa14.13□□□□□ -0.15
VAMP1-204ENST00000535180 FARP2O94887 1054 aaPredicted RBP14.12□□□□□ -0.15
VAMP1-204ENST00000535180 EIF2S2P20042 333 aaKnown RBP14.12□□□□□ -0.15
VAMP1-204ENST00000535180 AIMP1Q12904 312 aaKnown RBP14.12□□□□□ -0.15
VAMP1-204ENST00000535180 SUPT20HL1Q3ZLR7 823 aa14.12□□□□□ -0.15
VAMP1-204ENST00000535180 STRIP1Q5VSL9 837 aa14.12□□□□□ -0.15
VAMP1-204ENST00000535180 XAGE3Q8WTP9 111 aa14.12□□□□□ -0.15
VAMP1-204ENST00000535180 GDF15Q99988 308 aa14.12□□□□□ -0.15
VAMP1-204ENST00000535180 NUDCQ9Y266 331 aa14.12□□□□□ -0.15
VAMP1-204ENST00000535180 XDHP47989 1333 aa14.12□□□□□ -0.15
VAMP1-204ENST00000535180 MGAMO43451 1857 aa14.11□□□□□ -0.15
VAMP1-204ENST00000535180 USP2O75604 605 aaPredicted RBP14.11□□□□□ -0.15
VAMP1-204ENST00000535180 U2AF1L5P0DN76 240 aaPredicted RBP14.11□□□□□ -0.15
VAMP1-204ENST00000535180 CCL5P13501 91 aa14.11□□□□□ -0.15
VAMP1-204ENST00000535180 COL9A1P20849 921 aa14.11□□□□□ -0.15
VAMP1-204ENST00000535180 U2AF1Q01081 240 aaKnown RBP eCLIP14.11□□□□□ -0.15
VAMP1-204ENST00000535180 BRI3BPQ8WY22 251 aa14.11□□□□□ -0.15
VAMP1-204ENST00000535180 TTC28Q96AY4 2481 aa14.11□□□□□ -0.15
VAMP1-204ENST00000535180 OPTNQ96CV9 577 aa14.11□□□□□ -0.15
VAMP1-204ENST00000535180 RNF208Q9H0X6 261 aa14.11□□□□□ -0.15
VAMP1-204ENST00000535180 SEC31BQ9NQW1 1179 aa14.11□□□□□ -0.15
VAMP1-204ENST00000535180 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
VAMP1-204ENST00000535180 TLR2O60603 784 aa14.1□□□□□ -0.15
VAMP1-204ENST00000535180 ATP2B4P23634 1241 aa14.1□□□□□ -0.15
VAMP1-204ENST00000535180 GRK4P32298 578 aa14.1□□□□□ -0.15
VAMP1-204ENST00000535180 FAM43AQ8N2R8 423 aa14.1□□□□□ -0.15
VAMP1-204ENST00000535180 CFAP53Q96M91 514 aa14.1□□□□□ -0.15
VAMP1-204ENST00000535180 SPEF2Q9C093 1822 aa14.1□□□□□ -0.15
VAMP1-204ENST00000535180 CCL15-CCL14A0A0B4J2E2 113 aa14.09□□□□□ -0.15
VAMP1-204ENST00000535180 IRS4O14654 1257 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-204ENST00000535180 WDHD1O75717 1129 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-204ENST00000535180 BCAMP50895 628 aa14.09□□□□□ -0.15
VAMP1-204ENST00000535180 GTF2A2P52657 109 aa14.09□□□□□ -0.15
VAMP1-204ENST00000535180 CCL15Q16663 113 aa14.09□□□□□ -0.15
VAMP1-204ENST00000535180 RTL5Q5HYW3 569 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-204ENST00000535180 U2AF1L4Q8WU68 220 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms