RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 R3HCC1Q9Y3T6 440 aaKnown RBP6.21□□□□□ -1.42
SNHG1-201ENST00000535076 MAFBQ9Y5Q3 323 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-201ENST00000535076 PEG3Q9GZU2 1588 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 CCDC144AA2RUR9 1427 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 BNIP3LO60238 219 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 LZTS3O60299 673 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-201ENST00000535076 ATP2B1P20020 1258 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 ADCY2Q08462 1091 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 TMED1Q13445 227 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 PDCD2Q16342 344 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-201ENST00000535076 MAP9Q49MG5 647 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 B4GALNT3Q6L9W6 998 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 C1orf229Q6ZS94 237 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-201ENST00000535076 SLC9A9Q8IVB4 645 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 SMC5Q8IY18 1101 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 ACRBPQ8NEB7 543 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 SYAP1Q96A49 352 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-201ENST00000535076 POGKQ9P215 609 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 MKRN1Q9UHC7 482 aaKnown RBP6.2□□□□□ -1.42
SNHG1-201ENST00000535076 JRKLQ9Y4A0 524 aa6.2□□□□□ -1.42
SNHG1-201ENST00000535076 PALM3A6NDB9 673 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-201ENST00000535076 SFI1A8K8P3 1242 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 SMARCA5O60264 1052 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-201ENST00000535076 REC8O95072 547 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 MX2P20592 715 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 RABEP1Q15276 862 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 ATP2B3Q16720 1220 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 ZFYVE27Q5T4F4 411 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 CCDC30Q5VVM6 783 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 CCDC102BQ68D86 513 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 FMNL3Q8IVF7 1028 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 C7orf43Q8WVR3 580 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 ZNF594Q96JF6 807 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-201ENST00000535076 ZNF396Q96N95 335 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-201ENST00000535076 TRERF1Q96PN7 1200 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 SLX1AQ9BQ83 275 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 IQCGQ9H095 443 aaKnown RBP6.19□□□□□ -1.42
SNHG1-201ENST00000535076 VEZTQ9HBM0 779 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 ETAA1Q9NY74 926 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 AMOTL2Q9Y2J4 779 aa6.19□□□□□ -1.42
SNHG1-201ENST00000535076 NACADO15069 1562 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 BICDL2A1A5D9 508 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 IPO5O00410 1097 aaKnown RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 PES1O00541 588 aaKnown RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 FLT3P36888 993 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 TRPC1P48995 793 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 EIF5P55010 431 aaKnown RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 RWDD2BP57060 319 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 HDLBPQ00341 1268 aaKnown RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 CTBSQ01459 385 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 ICA1Q05084 483 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 TSNAXIP1Q2TAA8 658 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 NOM1Q5C9Z4 860 aaKnown RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 KANK4Q5T7N3 995 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 FOXR1Q6PIV2 292 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 OTUD6AQ7L8S5 288 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 CATIPQ7Z7H3 387 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 TSEN2Q8NCE0 465 aaKnown RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 GAS2L2Q8NHY3 880 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 TNPO1Q92973 898 aaKnown RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 AIDAQ96BJ3 306 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 RMDN2Q96LZ7 410 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 ZIC5Q96T25 663 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 CFHR5Q9BXR6 569 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 ZCCHC2Q9C0B9 1178 aaKnown RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 TSPAN10Q9H1Z9 355 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 CABP1Q9NZU7 370 aa6.18□□□□□ -1.42
SNHG1-201ENST00000535076 MORC2Q9Y6X9 1032 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-201ENST00000535076 BAZ1BQ9UIG0 1483 aaKnown RBP6.17□□□□□ -1.42
SNHG1-201ENST00000535076 A0A1B0GUL7 405 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 A0A1W2PNR3 127 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 EML1O00423 815 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 C21orf2O43822 256 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 KIF5CO60282 957 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 LGR5O75473 907 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 BAG4O95429 457 aaKnown RBP6.17□□□□□ -1.42
SNHG1-201ENST00000535076 CSB-PGBD3P0DP91 1061 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 IMPDH2P12268 514 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 SKILP12757 684 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 NAP1L1P55209 391 aaKnown RBP6.17□□□□□ -1.42
SNHG1-201ENST00000535076 IFT88Q13099 833 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 PDIA5Q14554 519 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 BMS1Q14692 1282 aaKnown RBP6.17□□□□□ -1.42
SNHG1-201ENST00000535076 LBRQ14739 615 aaKnown RBP6.17□□□□□ -1.42
SNHG1-201ENST00000535076 GRIN2CQ14957 1233 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 TAF7Q15545 349 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-201ENST00000535076 CRTC2Q53ET0 693 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-201ENST00000535076 WWC2Q6AWC2 1192 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 TRIM50Q86XT4 487 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 EFCAB13Q8IY85 973 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 SIX5Q8N196 739 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 PGBD3Q8N328 593 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 STAG1Q8WVM7 1258 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 ANKRD7Q92527 254 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 C22orf23Q9BZE7 217 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 PPP1R12CQ9BZL4 782 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 GZF1Q9H116 711 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-201ENST00000535076 METTL14Q9HCE5 456 aaKnown RBP6.17□□□□□ -1.42
SNHG1-201ENST00000535076 COMMD10Q9Y6G5 202 aa6.17□□□□□ -1.42
SNHG1-201ENST00000535076 TMCO5BA8MYB1 307 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms