RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 GNB5O14775 395 aa7.75□□□□□ -1.17
ATM-224ENST00000534625 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
ATM-224ENST00000534625 LARGE2Q8N3Y3 721 aa7.75□□□□□ -1.17
ATM-224ENST00000534625 SEMA6BQ9H3T3 888 aa7.75□□□□□ -1.17
ATM-224ENST00000534625 KLF15Q9UIH9 416 aa7.75□□□□□ -1.17
ATM-224ENST00000534625 PHLPP1O60346 1717 aa7.75□□□□□ -1.17
ATM-224ENST00000534625 NEXMIFQ5QGS0 1516 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 A6NJR5 290 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 M0R2N6 131 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 FAM157BP0CG42 384 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 CD33P20138 364 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 DOC2BQ14184 412 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 FAM182BQ5T319 152 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 SLCO4C1Q6ZQN7 724 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 BRINP3Q76B58 766 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 SIX5Q8N196 739 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 TSPAN10Q9H1Z9 355 aaPredicted RBP7.74□□□□□ -1.17
ATM-224ENST00000534625 STRN4Q9NRL3 753 aa7.74□□□□□ -1.17
ATM-224ENST00000534625 MAFBQ9Y5Q3 323 aaPredicted RBP7.74□□□□□ -1.17
ATM-224ENST00000534625 XRN1Q8IZH2 1706 aaKnown RBP7.74□□□□□ -1.17
ATM-224ENST00000534625 COL16A1Q07092 1604 aaPredicted RBP7.74□□□□□ -1.17
ATM-224ENST00000534625 KIF1BO60333 1816 aa7.73□□□□□ -1.17
ATM-224ENST00000534625 DCCP43146 1447 aa7.73□□□□□ -1.17
ATM-224ENST00000534625 PALM3A6NDB9 673 aaPredicted RBP7.73□□□□□ -1.17
ATM-224ENST00000534625 SFI1A8K8P3 1242 aa7.73□□□□□ -1.17
ATM-224ENST00000534625 KHNYNO15037 678 aaKnown RBP7.73□□□□□ -1.17
ATM-224ENST00000534625 EFSO43281 561 aa7.73□□□□□ -1.17
ATM-224ENST00000534625 ARAFP10398 606 aa7.73□□□□□ -1.17
ATM-224ENST00000534625 SAMD5Q5TGI4 173 aa7.73□□□□□ -1.17
ATM-224ENST00000534625 RPGRIP1LQ68CZ1 1315 aa7.73□□□□□ -1.17
ATM-224ENST00000534625 AHDC1Q5TGY3 1603 aaPredicted RBP7.72□□□□□ -1.17
ATM-224ENST00000534625 PIK3R2O00459 728 aa7.72□□□□□ -1.17
ATM-224ENST00000534625 EPXP11678 715 aa7.72□□□□□ -1.17
ATM-224ENST00000534625 TSEN2Q8NCE0 465 aaKnown RBP7.72□□□□□ -1.17
ATM-224ENST00000534625 ZNF594Q96JF6 807 aaPredicted RBP7.72□□□□□ -1.17
ATM-224ENST00000534625 MST1RQ04912 1400 aa7.71□□□□□ -1.17
ATM-224ENST00000534625 SERTM1A2A2V5 107 aa7.71□□□□□ -1.18
ATM-224ENST00000534625 NEURL1BA8MQ27 555 aa7.71□□□□□ -1.18
ATM-224ENST00000534625 C21orf2O43822 256 aa7.71□□□□□ -1.18
ATM-224ENST00000534625 DGKGP49619 791 aa7.71□□□□□ -1.18
ATM-224ENST00000534625 BICDL1Q6ZP65 573 aa7.71□□□□□ -1.18
ATM-224ENST00000534625 ZNF232Q9UNY5 417 aa7.71□□□□□ -1.18
ATM-224ENST00000534625 SPATA31A6Q5VVP1 1343 aa7.71□□□□□ -1.18
ATM-224ENST00000534625 ADGRL3Q9HAR2 1447 aa7.7□□□□□ -1.18
ATM-224ENST00000534625 HIRAP54198 1017 aaPredicted RBP7.7□□□□□ -1.18
ATM-224ENST00000534625 PSMA6P60900 246 aaKnown RBP7.7□□□□□ -1.18
ATM-224ENST00000534625 ZMYM1Q5SVZ6 1142 aa7.7□□□□□ -1.18
ATM-224ENST00000534625 LRRC69Q6ZNQ3 347 aa7.7□□□□□ -1.18
ATM-224ENST00000534625 FCHSD1Q86WN1 690 aa7.7□□□□□ -1.18
ATM-224ENST00000534625 DDX17Q92841 729 aaKnown RBP7.7□□□□□ -1.18
ATM-224ENST00000534625 MPHOSPH9Q99550 1183 aa7.7□□□□□ -1.18
ATM-224ENST00000534625 PPP1R12CQ9BZL4 782 aa7.7□□□□□ -1.18
ATM-224ENST00000534625 LRP6O75581 1613 aa7.7□□□□□ -1.18
ATM-224ENST00000534625 ROBO2Q9HCK4 1378 aa7.7□□□□□ -1.18
ATM-224ENST00000534625 SETD1AO15047 1707 aaKnown RBP7.69□□□□□ -1.18
ATM-224ENST00000534625 ASXL1Q8IXJ9 1541 aa7.69□□□□□ -1.18
ATM-224ENST00000534625 RASA1P20936 1047 aa7.69□□□□□ -1.18
ATM-224ENST00000534625 NOP53Q9NZM5 478 aaKnown RBP7.69□□□□□ -1.18
ATM-224ENST00000534625 GJA3Q9Y6H8 435 aa7.69□□□□□ -1.18
ATM-224ENST00000534625 ADGRF5Q8IZF2 1346 aa7.69□□□□□ -1.18
ATM-224ENST00000534625 PTCH1Q13635 1447 aa7.69□□□□□ -1.18
ATM-224ENST00000534625 SETD5Q9C0A6 1442 aa7.69□□□□□ -1.18
ATM-224ENST00000534625 SHPRHQ149N8 1683 aa7.68□□□□□ -1.18
ATM-224ENST00000534625 LAMC2Q13753 1193 aa7.68□□□□□ -1.18
ATM-224ENST00000534625 RGL3Q3MIN7 710 aa7.68□□□□□ -1.18
ATM-224ENST00000534625 CRTC2Q53ET0 693 aaPredicted RBP7.68□□□□□ -1.18
ATM-224ENST00000534625 MEX3CQ5U5Q3 659 aaKnown RBP7.68□□□□□ -1.18
ATM-224ENST00000534625 LRRC59Q96AG4 307 aaKnown RBP7.68□□□□□ -1.18
ATM-224ENST00000534625 CALR3Q96L12 384 aaKnown RBP7.68□□□□□ -1.18
ATM-224ENST00000534625 AVENQ9NQS1 362 aaPredicted RBP7.68□□□□□ -1.18
ATM-224ENST00000534625 MARK1Q9P0L2 795 aa7.68□□□□□ -1.18
ATM-224ENST00000534625 HCN4Q9Y3Q4 1203 aa7.68□□□□□ -1.18
ATM-224ENST00000534625 GPC6Q9Y625 555 aaPredicted RBP7.68□□□□□ -1.18
ATM-224ENST00000534625 NALCNQ8IZF0 1738 aa7.68□□□□□ -1.18
ATM-224ENST00000534625 PPLO60437 1756 aa7.68□□□□□ -1.18
ATM-224ENST00000534625 SPATA31E1Q6ZUB1 1445 aa7.68□□□□□ -1.18
ATM-224ENST00000534625 PRAG1Q86YV5 1406 aa7.68□□□□□ -1.18
ATM-224ENST00000534625 C1orf167Q5SNV9 1468 aa7.68□□□□□ -1.18
ATM-224ENST00000534625 ADH6P28332 368 aa7.67□□□□□ -1.18
ATM-224ENST00000534625 PTK7Q13308 1070 aa7.67□□□□□ -1.18
ATM-224ENST00000534625 ZNF468Q5VIY5 522 aaPredicted RBP7.67□□□□□ -1.18
ATM-224ENST00000534625 C1orf53Q5VUE5 145 aa7.67□□□□□ -1.18
ATM-224ENST00000534625 ZNF772Q68DY9 489 aaPredicted RBP7.67□□□□□ -1.18
ATM-224ENST00000534625 CHSY3Q70JA7 882 aa7.67□□□□□ -1.18
ATM-224ENST00000534625 KRTAP1-3Q8IUG1 177 aa7.67□□□□□ -1.18
ATM-224ENST00000534625 ORAI2Q96SN7 254 aa7.67□□□□□ -1.18
ATM-224ENST00000534625 PHACTR1Q9C0D0 580 aa7.67□□□□□ -1.18
ATM-224ENST00000534625 CCDC144AA2RUR9 1427 aa7.67□□□□□ -1.18
ATM-224ENST00000534625 NHSL1Q5SYE7 1610 aa7.67□□□□□ -1.18
ATM-224ENST00000534625 PCBP4P57723 403 aaKnown RBP7.66□□□□□ -1.18
ATM-224ENST00000534625 SFSWAPQ12872 951 aaKnown RBP7.66□□□□□ -1.18
ATM-224ENST00000534625 RHPN1Q8TCX5 695 aa7.66□□□□□ -1.18
ATM-224ENST00000534625 HSH2DQ96JZ2 352 aa7.66□□□□□ -1.18
ATM-224ENST00000534625 MDFIQ99750 246 aa7.66□□□□□ -1.18
ATM-224ENST00000534625 ATAD2Q6PL18 1390 aa7.66□□□□□ -1.18
ATM-224ENST00000534625 PPP1R12BO60237 982 aaPredicted RBP7.65□□□□□ -1.18
ATM-224ENST00000534625 GATA4P43694 442 aa7.65□□□□□ -1.18
ATM-224ENST00000534625 SEC13P55735 322 aa7.65□□□□□ -1.18
ATM-224ENST00000534625 TMEM132EQ6IEE7 984 aa7.65□□□□□ -1.18
ATM-224ENST00000534625 WAPLQ7Z5K2 1190 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms