RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 TBCAO75347 108 aaKnown RBP10.08□□□□□ -0.8
CTNND1-237ENST00000534579 PSMC4P43686 418 aa10.08□□□□□ -0.8
CTNND1-237ENST00000534579 PRPF31Q8WWY3 499 aaKnown RBP10.08□□□□□ -0.8
CTNND1-237ENST00000534579 ZC3H12CQ9C0D7 883 aaKnown RBP10.08□□□□□ -0.8
CTNND1-237ENST00000534579 DDX21Q9NR30 783 aaKnown RBP eCLIP10.08□□□□□ -0.84e-6■□□□□ 11.2
CTNND1-237ENST00000534579 USP16Q9Y5T5 823 aa10.08□□□□□ -0.8
CTNND1-237ENST00000534579 USO1O60763 962 aaKnown RBP10.08□□□□□ -0.8
CTNND1-237ENST00000534579 HMG20BQ9P0W2 317 aa10.08□□□□□ -0.8
CTNND1-237ENST00000534579 SAMD9LQ8IVG5 1584 aa10.08□□□□□ -0.8
CTNND1-237ENST00000534579 PDE1AP54750 535 aa10.08□□□□□ -0.8
CTNND1-237ENST00000534579 PICALMQ13492 652 aa10.08□□□□□ -0.8
CTNND1-237ENST00000534579 STX8Q9UNK0 236 aa10.08□□□□□ -0.8
CTNND1-237ENST00000534579 TNNQ9UQP3 1299 aa10.08□□□□□ -0.8
CTNND1-237ENST00000534579 SDSP20132 328 aa10.07□□□□□ -0.8
CTNND1-237ENST00000534579 NOD1Q9Y239 953 aa10.07□□□□□ -0.8
CTNND1-237ENST00000534579 TTC37Q6PGP7 1564 aa10.07□□□□□ -0.8
CTNND1-237ENST00000534579 MTIF2P46199 727 aaKnown RBP10.07□□□□□ -0.8
CTNND1-237ENST00000534579 SLC9C2Q5TAH2 1124 aa10.07□□□□□ -0.8
CTNND1-237ENST00000534579 C6orf163Q5TEZ5 329 aa10.07□□□□□ -0.8
CTNND1-237ENST00000534579 LGR6Q9HBX8 967 aa10.07□□□□□ -0.8
CTNND1-237ENST00000534579 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
CTNND1-237ENST00000534579 IARSP41252 1262 aaKnown RBP10.07□□□□□ -0.8
CTNND1-237ENST00000534579 PRIM1P49642 420 aaKnown RBP10.07□□□□□ -0.8
CTNND1-237ENST00000534579 METAP2P50579 478 aaKnown RBP eCLIP10.07□□□□□ -0.8
CTNND1-237ENST00000534579 PRDM10Q9NQV6 1147 aa10.07□□□□□ -0.8
CTNND1-237ENST00000534579 AMPD3Q01432 767 aa10.07□□□□□ -0.8
CTNND1-237ENST00000534579 VEZTQ9HBM0 779 aa10.07□□□□□ -0.8
CTNND1-237ENST00000534579 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 B4DLN1 442 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 RIMBP2O15034 1052 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 TSPY3P0CV98 308 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 TSPY8P0CW00 308 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 MRPL12P52815 198 aaKnown RBP10.06□□□□□ -0.8
CTNND1-237ENST00000534579 CAMK4Q16566 473 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 FILIP1Q7Z7B0 1213 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 BICC1Q9H694 974 aaKnown RBP10.06□□□□□ -0.8
CTNND1-237ENST00000534579 SLC52A2Q9HAB3 445 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 STK32BQ9NY57 414 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 EFCAB6Q5THR3 1501 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 KIF5CO60282 957 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 KIF4AO95239 1232 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 MBD5Q9P267 1494 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 CNBD1Q8NA66 436 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 PROCA1Q8NCQ7 364 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-237ENST00000534579 TMX1Q9H3N1 280 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 PAG1Q9NWQ8 432 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 SOS1Q07889 1333 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-237ENST00000534579 KDM5DQ9BY66 1539 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 PPFIA3O75145 1194 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 MCM5P33992 734 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 KMT5BQ4FZB7 885 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 SPECC1Q5M775 1068 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 RNF187Q5TA31 235 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-237ENST00000534579 TBC1D5Q92609 795 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 SCAND2PQ9GZW5 306 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-237ENST00000534579 ZNF408Q9H9D4 720 aa10.06□□□□□ -0.8
CTNND1-237ENST00000534579 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 IDEP14735 1019 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 TFCP2Q12800 502 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 MAP3K11Q16584 847 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 CEP85Q6P2H3 762 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 FAM89AQ96GI7 184 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 GJB2P29033 226 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 MXRA7P84157 204 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 WTAPQ15007 396 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 MAP9Q49MG5 647 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 CCDC63Q8NA47 563 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 HAUS7Q99871 368 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 SLC26A6Q9BXS9 759 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 A0A1W2PRG0 241 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 GJC1P36383 396 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 PAFAH1B1P43034 410 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 TPD52P55327 224 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-237ENST00000534579 HLTFQ14527 1009 aaKnown RBP eCLIP10.05□□□□□ -0.85e-6■□□□□ 9.8
CTNND1-237ENST00000534579 PLBD2Q8NHP8 589 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 JDP2Q8WYK2 163 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 KRT23Q9C075 422 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 ANKRD2Q9GZV1 360 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 GBP3Q9H0R5 595 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 TCP11L1Q9NUJ3 509 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 ORC3Q9UBD5 711 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-237ENST00000534579 PTPRTO14522 1441 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 YEATS4O95619 227 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 G2E3Q7L622 706 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 RBM17Q96I25 401 aaKnown RBP10.05□□□□□ -0.8
CTNND1-237ENST00000534579 MAGEB6P1A0A0J9YX57 407 aa10.05□□□□□ -0.8
CTNND1-237ENST00000534579 IQCGQ9H095 443 aaKnown RBP10.05□□□□□ -0.8
CTNND1-237ENST00000534579 UGGT1Q9NYU2 1555 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 MRVI1Q9Y6F6 885 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 TMEM94Q12767 1356 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 RLBP1P12271 317 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 SPOUT1Q5T280 376 aaKnown RBP10.04□□□□□ -0.8
CTNND1-237ENST00000534579 CPLX3Q8WVH0 158 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 ESR2Q92731 530 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 TNPO1Q92973 898 aaKnown RBP10.04□□□□□ -0.8
CTNND1-237ENST00000534579 EYA3Q99504 573 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 SYCE3A1L190 88 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 A1BGP04217 495 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 IFIT1BQ5T764 474 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms