RNA–Protein interactions for RNA: ENST00000534484.1

LMO1-204, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LMO1, Length 770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-204ENST00000534484 UPF3BQ9BZI7 483 aaKnown RBP16.18■□□□□ 0.18
LMO1-204ENST00000534484 TAF1P21675 1872 aa16.17■□□□□ 0.18
LMO1-204ENST00000534484 ZAP70P43403 619 aa16.17■□□□□ 0.18
LMO1-204ENST00000534484 NUCB2P80303 420 aa16.17■□□□□ 0.18
LMO1-204ENST00000534484 KRT32Q14532 448 aa16.17■□□□□ 0.18
LMO1-204ENST00000534484 CCDC102BQ68D86 513 aa16.17■□□□□ 0.18
LMO1-204ENST00000534484 TPTE2Q6XPS3 522 aa16.17■□□□□ 0.18
LMO1-204ENST00000534484 SEC62Q99442 399 aaKnown RBP16.17■□□□□ 0.18
LMO1-204ENST00000534484 BSDC1Q9NW68 430 aaPredicted RBP16.17■□□□□ 0.18
LMO1-204ENST00000534484 RGPD3A6NKT7 1758 aaPredicted RBP16.17■□□□□ 0.18
LMO1-204ENST00000534484 RGPD4Q7Z3J3 1758 aa16.17■□□□□ 0.18
LMO1-204ENST00000534484 LAMA4Q16363 1823 aa16.17■□□□□ 0.18
LMO1-204ENST00000534484 TNRC6CQ9HCJ0 1690 aaKnown RBP16.16■□□□□ 0.18
LMO1-204ENST00000534484 ADCK5Q3MIX3 580 aa16.16■□□□□ 0.18
LMO1-204ENST00000534484 C3orf67Q6ZVT6 689 aa16.16■□□□□ 0.18
LMO1-204ENST00000534484 RUFY3Q7L099 469 aa16.16■□□□□ 0.18
LMO1-204ENST00000534484 CYP46A1Q9Y6A2 500 aa16.16■□□□□ 0.18
LMO1-204ENST00000534484 MAST3O60307 1309 aa16.16■□□□□ 0.18
LMO1-204ENST00000534484 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
LMO1-204ENST00000534484 MCM4P33991 863 aa16.15■□□□□ 0.18
LMO1-204ENST00000534484 RFC4P35249 363 aa16.15■□□□□ 0.18
LMO1-204ENST00000534484 PHKA1P46020 1223 aa16.15■□□□□ 0.18
LMO1-204ENST00000534484 KCNJ4P48050 445 aa16.15■□□□□ 0.18
LMO1-204ENST00000534484 FKBP4Q02790 459 aaKnown RBP eCLIP16.15■□□□□ 0.18
LMO1-204ENST00000534484 CHRNDQ07001 517 aa16.15■□□□□ 0.18
LMO1-204ENST00000534484 ZSCAN25Q6NSZ9 544 aa16.15■□□□□ 0.18
LMO1-204ENST00000534484 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
LMO1-204ENST00000534484 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
LMO1-204ENST00000534484 APPBP2Q92624 585 aa16.15■□□□□ 0.18
LMO1-204ENST00000534484 JAKMIP1Q96N16 626 aaKnown RBP16.15■□□□□ 0.18
LMO1-204ENST00000534484 CHGBP05060 677 aa16.14■□□□□ 0.17
LMO1-204ENST00000534484 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
LMO1-204ENST00000534484 AK2P54819 239 aa16.14■□□□□ 0.17
LMO1-204ENST00000534484 UBE4AQ14139 1066 aa16.14■□□□□ 0.17
LMO1-204ENST00000534484 UBE3CQ15386 1083 aa16.14■□□□□ 0.17
LMO1-204ENST00000534484 NBPF5PQ86XG9 351 aaPredicted RBP16.14■□□□□ 0.17
LMO1-204ENST00000534484 TNPO1Q92973 898 aaKnown RBP16.14■□□□□ 0.17
LMO1-204ENST00000534484 OSBP2Q969R2 916 aa16.14■□□□□ 0.17
LMO1-204ENST00000534484 ZSCAN31Q96LW9 406 aaPredicted RBP16.14■□□□□ 0.17
LMO1-204ENST00000534484 NLRP3Q96P20 1036 aa16.14■□□□□ 0.17
LMO1-204ENST00000534484 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.17
LMO1-204ENST00000534484 LIMCH1Q9UPQ0 1083 aa16.14■□□□□ 0.17
LMO1-204ENST00000534484 ZNF804BA4D1E1 1349 aa16.14■□□□□ 0.17
LMO1-204ENST00000534484 PLSCR1O15162 318 aa16.13■□□□□ 0.17
LMO1-204ENST00000534484 TM4SF1P30408 202 aa16.13■□□□□ 0.17
LMO1-204ENST00000534484 ADD2P35612 726 aa16.13■□□□□ 0.17
LMO1-204ENST00000534484 BICDL1Q6ZP65 573 aa16.13■□□□□ 0.17
LMO1-204ENST00000534484 CCDC129Q6ZRS4 1044 aa16.13■□□□□ 0.17
LMO1-204ENST00000534484 ZGPATQ8N5A5 531 aaKnown RBP16.13■□□□□ 0.17
LMO1-204ENST00000534484 HELBQ8NG08 1087 aaPredicted RBP16.13■□□□□ 0.17
LMO1-204ENST00000534484 PDRG1Q9NUG6 133 aa16.13■□□□□ 0.17
LMO1-204ENST00000534484 M0R2C6 588 aa16.12■□□□□ 0.17
LMO1-204ENST00000534484 HSPD1P10809 573 aaKnown RBP16.12■□□□□ 0.17
LMO1-204ENST00000534484 RPS6KB1P23443 525 aa16.12■□□□□ 0.17
LMO1-204ENST00000534484 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
LMO1-204ENST00000534484 NFIXQ14938 502 aa16.12■□□□□ 0.17
LMO1-204ENST00000534484 SH2B1Q9NRF2 756 aaPredicted RBP16.12■□□□□ 0.17
LMO1-204ENST00000534484 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
LMO1-204ENST00000534484 TNS1Q9HBL0 1735 aaKnown RBP16.11■□□□□ 0.17
LMO1-204ENST00000534484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.11■□□□□ 0.17
LMO1-204ENST00000534484 TRIM37O94972 964 aa16.11■□□□□ 0.17
LMO1-204ENST00000534484 CYP21A2P08686 494 aa16.11■□□□□ 0.17
LMO1-204ENST00000534484 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
LMO1-204ENST00000534484 BLOC1S2Q6QNY1 142 aa16.11■□□□□ 0.17
LMO1-204ENST00000534484 PI16Q6UXB8 463 aa16.11■□□□□ 0.17
LMO1-204ENST00000534484 PROM2Q8N271 834 aa16.11■□□□□ 0.17
LMO1-204ENST00000534484 SPATA5Q8NB90 893 aa16.11■□□□□ 0.17
LMO1-204ENST00000534484 GBP4Q96PP9 640 aa16.11■□□□□ 0.17
LMO1-204ENST00000534484 PIH1D3Q9NQM4 214 aaKnown RBP16.11■□□□□ 0.17
LMO1-204ENST00000534484 MINPP1Q9UNW1 487 aa16.11■□□□□ 0.17
LMO1-204ENST00000534484 NRXN2Q9P2S2 1712 aa16.11■□□□□ 0.17
LMO1-204ENST00000534484 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
LMO1-204ENST00000534484 DDX11L8A8MPP1 907 aa16.1■□□□□ 0.17
LMO1-204ENST00000534484 FOXP2O15409 715 aa16.1■□□□□ 0.17
LMO1-204ENST00000534484 GYS1P13807 737 aa16.1■□□□□ 0.17
LMO1-204ENST00000534484 PTMSP20962 102 aa16.1■□□□□ 0.17
LMO1-204ENST00000534484 RPS8P62241 208 aaKnown RBP16.1■□□□□ 0.17
LMO1-204ENST00000534484 TXNRD1Q16881 649 aa16.1■□□□□ 0.17
LMO1-204ENST00000534484 SLFNL1Q499Z3 407 aa16.1■□□□□ 0.17
LMO1-204ENST00000534484 CELF1Q92879 486 aaKnown RBP16.1■□□□□ 0.17
LMO1-204ENST00000534484 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
LMO1-204ENST00000534484 PDS5AQ29RF7 1337 aaKnown RBP16.1■□□□□ 0.17
LMO1-204ENST00000534484 HMGB1P09429 215 aaKnown RBP16.09■□□□□ 0.17
LMO1-204ENST00000534484 RASGRF1Q13972 1273 aa16.09■□□□□ 0.17
LMO1-204ENST00000534484 NEK1Q96PY6 1258 aa16.09■□□□□ 0.17
LMO1-204ENST00000534484 ANKRD2Q9GZV1 360 aa16.09■□□□□ 0.17
LMO1-204ENST00000534484 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
LMO1-204ENST00000534484 MYH13Q9UKX3 1938 aa16.09■□□□□ 0.17
LMO1-204ENST00000534484 CPA1P15085 419 aa16.08■□□□□ 0.16
LMO1-204ENST00000534484 PDE6AP16499 860 aa16.08■□□□□ 0.16
LMO1-204ENST00000534484 FBXL16Q8N461 479 aa16.08■□□□□ 0.16
LMO1-204ENST00000534484 AGXT2Q9BYV1 514 aa16.08■□□□□ 0.16
LMO1-204ENST00000534484 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
LMO1-204ENST00000534484 ZDHHC9Q9Y397 364 aa16.08■□□□□ 0.16
LMO1-204ENST00000534484 ZMYM6O95789 1325 aa16.08■□□□□ 0.16
LMO1-204ENST00000534484 SNAP23O00161 211 aa16.07■□□□□ 0.16
LMO1-204ENST00000534484 SEMA3EO15041 775 aa16.07■□□□□ 0.16
LMO1-204ENST00000534484 IGSF3O75054 1194 aa16.07■□□□□ 0.16
LMO1-204ENST00000534484 PHF14O94880 888 aa16.07■□□□□ 0.16
LMO1-204ENST00000534484 BRD1O95696 1058 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms