RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 NLRP2Q9NX02 1062 aa11.06□□□□□ -0.64
CASP4-213ENST00000534356 GADD45BO75293 160 aaPredicted RBP11.05□□□□□ -0.64
CASP4-213ENST00000534356 INSM1Q01101 510 aaPredicted RBP11.05□□□□□ -0.64
CASP4-213ENST00000534356 TTC9Q92623 222 aa11.05□□□□□ -0.64
CASP4-213ENST00000534356 POP1Q99575 1024 aaKnown RBP11.05□□□□□ -0.64
CASP4-213ENST00000534356 GRIK5Q16478 980 aa11.04□□□□□ -0.64
CASP4-213ENST00000534356 ADAMTSL4Q6UY14 1074 aa11.04□□□□□ -0.64
CASP4-213ENST00000534356 TMEM102Q8N9M5 508 aaPredicted RBP11.04□□□□□ -0.64
CASP4-213ENST00000534356 EHD4Q9H223 541 aa11.04□□□□□ -0.64
CASP4-213ENST00000534356 RRAGCQ9HB90 399 aa11.04□□□□□ -0.64
CASP4-213ENST00000534356 TRIM33Q9UPN9 1127 aa11.04□□□□□ -0.64
CASP4-213ENST00000534356 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
CASP4-213ENST00000534356 PDE2AO00408 941 aaPredicted RBP11.03□□□□□ -0.64
CASP4-213ENST00000534356 LILRB5O75023 590 aa11.03□□□□□ -0.64
CASP4-213ENST00000534356 SMNDC1O75940 238 aaKnown RBP eCLIP11.03□□□□□ -0.64
CASP4-213ENST00000534356 ZNF16P17020 682 aaPredicted RBP11.03□□□□□ -0.64
CASP4-213ENST00000534356 DGKGP49619 791 aa11.03□□□□□ -0.64
CASP4-213ENST00000534356 AFF1P51825 1210 aaKnown RBP11.03□□□□□ -0.64
CASP4-213ENST00000534356 FGD1P98174 961 aa11.03□□□□□ -0.64
CASP4-213ENST00000534356 GRM2Q14416 872 aa11.03□□□□□ -0.64
CASP4-213ENST00000534356 NXPE3Q969Y0 559 aa11.03□□□□□ -0.64
CASP4-213ENST00000534356 TCF12Q99081 682 aa11.03□□□□□ -0.64
CASP4-213ENST00000534356 SUV39H2Q9H5I1 410 aa11.03□□□□□ -0.64
CASP4-213ENST00000534356 LIN7BQ9HAP6 207 aa11.03□□□□□ -0.64
CASP4-213ENST00000534356 PARP2Q9UGN5 583 aa11.03□□□□□ -0.64
CASP4-213ENST00000534356 SNRPNP63162 240 aaKnown RBP11.02□□□□□ -0.65
CASP4-213ENST00000534356 ZNF326Q5BKZ1 582 aaKnown RBP11.02□□□□□ -0.65
CASP4-213ENST00000534356 GDF6Q6KF10 455 aaPredicted RBP11.02□□□□□ -0.65
CASP4-213ENST00000534356 METTL12A8MUP2 240 aa11.01□□□□□ -0.65
CASP4-213ENST00000534356 COL9A3Q14050 684 aaPredicted RBP11.01□□□□□ -0.65
CASP4-213ENST00000534356 CCNJLQ8IV13 435 aa11.01□□□□□ -0.65
CASP4-213ENST00000534356 GLIS3Q8NEA6 775 aa11.01□□□□□ -0.65
CASP4-213ENST00000534356 FAM161BQ96MY7 647 aa11.01□□□□□ -0.65
CASP4-213ENST00000534356 BCO2Q9BYV7 579 aa11.01□□□□□ -0.65
CASP4-213ENST00000534356 OSBPL7Q9BZF2 842 aa11.01□□□□□ -0.65
CASP4-213ENST00000534356 LACRTQ9GZZ8 138 aa11.01□□□□□ -0.65
CASP4-213ENST00000534356 PRDM6Q9NQX0 595 aa11.01□□□□□ -0.65
CASP4-213ENST00000534356 GNA15P30679 374 aa11□□□□□ -0.65
CASP4-213ENST00000534356 NXPE4Q6UWF7 544 aa11□□□□□ -0.65
CASP4-213ENST00000534356 BHLHE41Q9C0J9 482 aaPredicted RBP11□□□□□ -0.65
CASP4-213ENST00000534356 SPG7Q9UQ90 795 aa11□□□□□ -0.65
CASP4-213ENST00000534356 XPCQ01831 940 aaPredicted RBP10.99□□□□□ -0.65
CASP4-213ENST00000534356 LINC00114Q6XXX2 140 aa10.99□□□□□ -0.65
CASP4-213ENST00000534356 ADAMTS8Q9UP79 889 aa10.99□□□□□ -0.65
CASP4-213ENST00000534356 NID1P14543 1247 aa10.98□□□□□ -0.65
CASP4-213ENST00000534356 GRIA4P48058 902 aa10.98□□□□□ -0.65
CASP4-213ENST00000534356 DAB2P98082 770 aa10.98□□□□□ -0.65
CASP4-213ENST00000534356 ASAP3Q8TDY4 903 aa10.98□□□□□ -0.65
CASP4-213ENST00000534356 PTPRAP18433 802 aa10.97□□□□□ -0.65
CASP4-213ENST00000534356 BAG6P46379 1132 aa10.97□□□□□ -0.65
CASP4-213ENST00000534356 PSMD2Q13200 908 aa10.97□□□□□ -0.65
CASP4-213ENST00000534356 SPRED3Q2MJR0 410 aa10.97□□□□□ -0.65
CASP4-213ENST00000534356 PRPF40BQ6NWY9 871 aaKnown RBP10.97□□□□□ -0.65
CASP4-213ENST00000534356 FRMD6Q96NE9 622 aa10.97□□□□□ -0.65
CASP4-213ENST00000534356 ADAM19Q9H013 955 aa10.97□□□□□ -0.65
CASP4-213ENST00000534356 ABCB6Q9NP58 842 aa10.97□□□□□ -0.65
CASP4-213ENST00000534356 SH2B1Q9NRF2 756 aaPredicted RBP10.97□□□□□ -0.65
CASP4-213ENST00000534356 TRAK1Q9UPV9 953 aa10.97□□□□□ -0.65
CASP4-213ENST00000534356 TMC4Q7Z404 712 aa10.96□□□□□ -0.65
CASP4-213ENST00000534356 IL22RA1Q8N6P7 574 aa10.96□□□□□ -0.65
CASP4-213ENST00000534356 ZNF428Q96B54 188 aa10.96□□□□□ -0.65
CASP4-213ENST00000534356 C12orf49Q9H741 205 aa10.96□□□□□ -0.65
CASP4-213ENST00000534356 AK5Q9Y6K8 562 aa10.96□□□□□ -0.65
CASP4-213ENST00000534356 NISCHQ9Y2I1 1504 aa10.95□□□□□ -0.66
CASP4-213ENST00000534356 A0A096LPE4 126 aa10.95□□□□□ -0.66
CASP4-213ENST00000534356 TMEM238LA0A1B0GVL6 79 aa10.95□□□□□ -0.66
CASP4-213ENST00000534356 A0A1W2PPZ6 126 aa10.95□□□□□ -0.66
CASP4-213ENST00000534356 GIPC1O14908 333 aa10.95□□□□□ -0.66
CASP4-213ENST00000534356 CDC27P30260 824 aa10.95□□□□□ -0.66
CASP4-213ENST00000534356 MSL1Q68DK7 614 aa10.95□□□□□ -0.66
CASP4-213ENST00000534356 BSNDQ8WZ55 320 aa10.95□□□□□ -0.66
CASP4-213ENST00000534356 TRIM11Q96F44 468 aa10.95□□□□□ -0.66
CASP4-213ENST00000534356 MUC3BQ9H195 1237 aa10.95□□□□□ -0.66
CASP4-213ENST00000534356 CNTNAP5Q8WYK1 1306 aa10.94□□□□□ -0.66
CASP4-213ENST00000534356 ILDR2Q71H61 639 aa10.94□□□□□ -0.66
CASP4-213ENST00000534356 WFDC8Q8IUA0 241 aa10.94□□□□□ -0.66
CASP4-213ENST00000534356 PPP4R2Q9NY27 417 aa10.94□□□□□ -0.66
CASP4-213ENST00000534356 SOX13Q9UN79 622 aa10.94□□□□□ -0.66
CASP4-213ENST00000534356 UNCXA6NJT0 531 aa10.93□□□□□ -0.66
CASP4-213ENST00000534356 EPHA1P21709 976 aa10.93□□□□□ -0.66
CASP4-213ENST00000534356 EIF4BP23588 611 aaKnown RBP10.93□□□□□ -0.66
CASP4-213ENST00000534356 FCGRTP55899 365 aa10.93□□□□□ -0.66
CASP4-213ENST00000534356 VN1R5Q7Z5H4 357 aa10.93□□□□□ -0.66
CASP4-213ENST00000534356 DMRTC2Q8IXT2 367 aaPredicted RBP10.93□□□□□ -0.66
CASP4-213ENST00000534356 CACTIN-AS1Q8N1I8 211 aa10.93□□□□□ -0.66
CASP4-213ENST00000534356 SRCIN1Q9C0H9 1055 aa10.93□□□□□ -0.66
CASP4-213ENST00000534356 MKL2Q9ULH7 1088 aa10.93□□□□□ -0.66
CASP4-213ENST00000534356 CDC25BP30305 580 aa10.92□□□□□ -0.66
CASP4-213ENST00000534356 PPME1Q9Y570 386 aa10.92□□□□□ -0.66
CASP4-213ENST00000534356 GNB5O14775 395 aa10.91□□□□□ -0.66
CASP4-213ENST00000534356 SORBS3O60504 671 aa10.91□□□□□ -0.66
CASP4-213ENST00000534356 USP17L7P0C7H9 530 aa10.91□□□□□ -0.66
CASP4-213ENST00000534356 ITPKAP23677 461 aa10.91□□□□□ -0.66
CASP4-213ENST00000534356 TXNDC11Q6PKC3 985 aa10.91□□□□□ -0.66
CASP4-213ENST00000534356 DTHD1Q6ZMT9 781 aa10.91□□□□□ -0.66
CASP4-213ENST00000534356 BEND7Q8N7W2 519 aaPredicted RBP10.91□□□□□ -0.66
CASP4-213ENST00000534356 C3orf58Q8NDZ4 430 aa10.91□□□□□ -0.66
CASP4-213ENST00000534356 PLVAPQ9BX97 442 aa10.91□□□□□ -0.66
CASP4-213ENST00000534356 MRS2Q9HD23 443 aa10.91□□□□□ -0.66
CASP4-213ENST00000534356 FAM8A1Q9UBU6 413 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms