RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 TGFB2P61812 414 aa13.5□□□□□ -0.25
CCDC90B-218ENST00000533761 ANKRD45Q5TZF3 282 aa13.5□□□□□ -0.25
CCDC90B-218ENST00000533761 CHD1LQ86WJ1 897 aa13.5□□□□□ -0.25
CCDC90B-218ENST00000533761 ERC1Q8IUD2 1116 aa13.5□□□□□ -0.25
CCDC90B-218ENST00000533761 PLA2G12BQ9BX93 195 aa13.5□□□□□ -0.25
CCDC90B-218ENST00000533761 C10orf71Q711Q0 1435 aa13.5□□□□□ -0.25
CCDC90B-218ENST00000533761 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
CCDC90B-218ENST00000533761 KLRG2A4D1S0 409 aaPredicted RBP13.49□□□□□ -0.25
CCDC90B-218ENST00000533761 H0YIN7 160 aa13.49□□□□□ -0.25
CCDC90B-218ENST00000533761 SRCAPQ6ZRS2 3230 aa13.49□□□□□ -0.25
CCDC90B-218ENST00000533761 CRY2Q49AN0 593 aa13.49□□□□□ -0.25
CCDC90B-218ENST00000533761 TBC1D12O60347 775 aa13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 RGS3P49796 1198 aa13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 CTSWP56202 376 aa13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 OS9Q13438 667 aaPredicted RBP13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 SF3B3Q15393 1217 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 RPGRQ92834 1020 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 SUCLG2Q96I99 432 aa13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 LRRCC1Q9C099 1032 aa13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 BICC1Q9H694 974 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-218ENST00000533761 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
CCDC90B-218ENST00000533761 SURF6O75683 361 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-218ENST00000533761 SRGNP10124 158 aa13.47□□□□□ -0.25
CCDC90B-218ENST00000533761 FOXO4P98177 505 aa13.47□□□□□ -0.25
CCDC90B-218ENST00000533761 C2CD5Q86YS7 1000 aa13.47□□□□□ -0.25
CCDC90B-218ENST00000533761 TTLL11Q8NHH1 800 aa13.47□□□□□ -0.25
CCDC90B-218ENST00000533761 KIF13BQ9NQT8 1826 aa13.47□□□□□ -0.25
CCDC90B-218ENST00000533761 LRP5O75197 1615 aa13.47□□□□□ -0.25
CCDC90B-218ENST00000533761 CSF1RP07333 972 aa13.46□□□□□ -0.25
CCDC90B-218ENST00000533761 NPR1P16066 1061 aa13.46□□□□□ -0.25
CCDC90B-218ENST00000533761 ALDH1B1P30837 517 aa13.46□□□□□ -0.25
CCDC90B-218ENST00000533761 RABL6Q3YEC7 729 aaPredicted RBP13.46□□□□□ -0.25
CCDC90B-218ENST00000533761 LMBR1LQ6UX01 489 aa13.46□□□□□ -0.25
CCDC90B-218ENST00000533761 KIF1BPQ96EK5 621 aa13.46□□□□□ -0.25
CCDC90B-218ENST00000533761 MASTLQ96GX5 879 aa13.46□□□□□ -0.25
CCDC90B-218ENST00000533761 KAZALD1Q96I82 304 aa13.46□□□□□ -0.25
CCDC90B-218ENST00000533761 SYT17Q9BSW7 474 aa13.46□□□□□ -0.25
CCDC90B-218ENST00000533761 DDX60Q8IY21 1712 aaKnown RBP13.46□□□□□ -0.26
CCDC90B-218ENST00000533761 A0A0G2JLW4 131 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 HOXA10P31260 410 aaPredicted RBP13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 EPHA10Q5JZY3 1008 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 DDX46Q7L014 1031 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 LNPKQ9C0E8 428 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 ANKRD31Q8N7Z5 1873 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 LAMB2P55268 1798 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 MYH3P11055 1940 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 DPEP1P16444 411 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 CHRNA5P30532 468 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 G3BP1Q13283 466 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 IFIT5Q13325 482 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 LAPTM4AQ15012 233 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 CCDC57Q2TAC2 916 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 STYK1Q6J9G0 422 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 EXOC6BQ9Y2D4 811 aa13.45□□□□□ -0.26
CCDC90B-218ENST00000533761 EIF5BO60841 1220 aaKnown RBP13.44□□□□□ -0.26
CCDC90B-218ENST00000533761 ITGBL1O95965 494 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-218ENST00000533761 CCDC85AQ96PX6 553 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-218ENST00000533761 CRAMP1Q96RY5 1269 aa13.44□□□□□ -0.26
CCDC90B-218ENST00000533761 GREM2Q9H772 168 aa13.44□□□□□ -0.26
CCDC90B-218ENST00000533761 PIM2Q9P1W9 311 aa13.44□□□□□ -0.26
CCDC90B-218ENST00000533761 RTL9Q8NET4 1388 aa13.44□□□□□ -0.26
CCDC90B-218ENST00000533761 TNRC6CQ9HCJ0 1690 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-218ENST00000533761 KCNA3P22001 575 aa13.43□□□□□ -0.26
CCDC90B-218ENST00000533761 ITGA6P23229 1130 aa13.43□□□□□ -0.26
CCDC90B-218ENST00000533761 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-218ENST00000533761 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-218ENST00000533761 COPRSQ9NQ92 184 aa13.43□□□□□ -0.26
CCDC90B-218ENST00000533761 ANKRD18BA2A2Z9 1011 aa13.42□□□□□ -0.26
CCDC90B-218ENST00000533761 APBB1O00213 710 aa13.42□□□□□ -0.26
CCDC90B-218ENST00000533761 BBOX1O75936 387 aa13.42□□□□□ -0.26
CCDC90B-218ENST00000533761 FAM161AQ3B820 660 aa13.42□□□□□ -0.26
CCDC90B-218ENST00000533761 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
CCDC90B-218ENST00000533761 TTLL6Q8N841 843 aa13.42□□□□□ -0.26
CCDC90B-218ENST00000533761 NLGN2Q8NFZ4 835 aa13.42□□□□□ -0.26
CCDC90B-218ENST00000533761 GPATCH3Q96I76 525 aa13.42□□□□□ -0.26
CCDC90B-218ENST00000533761 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 FOXK1P85037 733 aa13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 GRAPQ13588 217 aa13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 GRAPLQ8TC17 118 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 IGHMBP2P38935 993 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 DALRD3Q5D0E6 543 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 ANKRD18AQ8IVF6 992 aa13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 PLPP6Q8IY26 295 aa13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 RHPN1Q8TCX5 695 aa13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 TMX4Q9H1E5 349 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 SEC31BQ9NQW1 1179 aa13.41□□□□□ -0.26
CCDC90B-218ENST00000533761 PRPF40BQ6NWY9 871 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-218ENST00000533761 MPHOSPH8Q99549 860 aa13.4□□□□□ -0.26
CCDC90B-218ENST00000533761 COL11A2P13942 1736 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-218ENST00000533761 CIAO1O76071 339 aa13.39□□□□□ -0.27
CCDC90B-218ENST00000533761 IL15P40933 162 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-218ENST00000533761 BMP2KLQ5H9B9 411 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms