RNA–Protein interactions for RNA: ENST00000533559.5

FNTA-213, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-213ENST00000533559 ZNF496Q96IT1 587 aaPredicted RBP9.25□□□□□ -0.93
FNTA-213ENST00000533559 ZSWIM6Q9HCJ5 1215 aa9.25□□□□□ -0.93
FNTA-213ENST00000533559 CCDC87Q9NVE4 849 aa9.25□□□□□ -0.93
FNTA-213ENST00000533559 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
FNTA-213ENST00000533559 KIF3AQ9Y496 699 aa9.25□□□□□ -0.93
FNTA-213ENST00000533559 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
FNTA-213ENST00000533559 IGKV5-2P06315 115 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 PROSER3Q2NL68 480 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 ZSCAN23Q3MJ62 389 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 TSGA10IPQ3SY00 556 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 TRAPPC3LQ5T215 181 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 CAVIN1Q6NZI2 390 aaKnown RBP9.24□□□□□ -0.93
FNTA-213ENST00000533559 RUFY3Q7L099 469 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 TMEM87AQ8NBN3 555 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 CCDC191Q8NCU4 936 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 MAP4K1Q92918 833 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 TTC14Q96N46 770 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 CWC25Q9NXE8 425 aaPredicted RBP9.24□□□□□ -0.93
FNTA-213ENST00000533559 PALD1Q9ULE6 856 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 CNTNAP4Q9C0A0 1308 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 LAMB4A4D0S4 1761 aa9.24□□□□□ -0.93
FNTA-213ENST00000533559 NRXN2Q9P2S2 1712 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 A0A087WZG4 1122 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 ZSCAN22P10073 491 aaPredicted RBP9.23□□□□□ -0.93
FNTA-213ENST00000533559 GYS1P13807 737 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 IL15P40933 162 aaPredicted RBP9.23□□□□□ -0.93
FNTA-213ENST00000533559 SLC39A6Q13433 755 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 C9orf131Q5VYM1 1079 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 BLOC1S2Q6QNY1 142 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 LRSAM1Q6UWE0 723 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 IFNL1Q8IU54 200 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 VSIG10Q8N0Z9 540 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 NLGN1Q8N2Q7 840 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 RBM46Q8TBY0 533 aaKnown RBP9.23□□□□□ -0.93
FNTA-213ENST00000533559 JAKMIP1Q96N16 626 aaKnown RBP9.23□□□□□ -0.93
FNTA-213ENST00000533559 SLC4A9Q96Q91 983 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 UPF3BQ9BZI7 483 aaKnown RBP9.23□□□□□ -0.93
FNTA-213ENST00000533559 PARP3Q9Y6F1 533 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 CACNA1SQ13698 1873 aa9.23□□□□□ -0.93
FNTA-213ENST00000533559 STX6O43752 255 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 CIAO1O76071 339 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 SASH1O94885 1247 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 MAP4K4O95819 1239 aaPredicted RBP9.22□□□□□ -0.93
FNTA-213ENST00000533559 MCM5P33992 734 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 RFC4P35249 363 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 CLCN1P35523 988 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 AK2P54819 239 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 UBE2HP62256 183 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 NECTIN1Q15223 517 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 HSP90AB3PQ58FF7 597 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 TNNI3KQ59H18 835 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 CREB3L3Q68CJ9 461 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 PRPF40BQ6NWY9 871 aaKnown RBP9.22□□□□□ -0.93
FNTA-213ENST00000533559 ARHGEF1Q92888 912 aaKnown RBP9.22□□□□□ -0.93
FNTA-213ENST00000533559 EAF2Q96CJ1 260 aaPredicted RBP9.22□□□□□ -0.93
FNTA-213ENST00000533559 KLRG1Q96E93 195 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 PPP1R9BQ96SB3 815 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 PA2G4Q9UQ80 394 aaKnown RBP9.22□□□□□ -0.93
FNTA-213ENST00000533559 AKAP2Q9Y2D5 859 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 RBM8AQ9Y5S9 174 aaKnown RBP9.22□□□□□ -0.93
FNTA-213ENST00000533559 FPGT-TNNI3KV9GXZ4 949 aa9.22□□□□□ -0.93
FNTA-213ENST00000533559 H7C1W4 665 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 STARD3NLO95772 234 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 KCNA3P22001 575 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 MSNP26038 577 aaKnown RBP9.21□□□□□ -0.94
FNTA-213ENST00000533559 UVSSAQ2YD98 709 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 CCDC183Q5T5S1 534 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 COL13A1Q5TAT6 717 aaPredicted RBP9.21□□□□□ -0.94
FNTA-213ENST00000533559 KIF6Q6ZMV9 814 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 UBE3BQ7Z3V4 1068 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.21□□□□□ -0.94
FNTA-213ENST00000533559 HAUS7Q99871 368 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 HELLSQ9NRZ9 838 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 RNF181Q9P0P0 153 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 ZDHHC9Q9Y397 364 aa9.21□□□□□ -0.94
FNTA-213ENST00000533559 COL11A2P13942 1736 aaPredicted RBP9.2□□□□□ -0.94
FNTA-213ENST00000533559 ESPNB1AK53 854 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 RPS6KA4O75676 772 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 ZFYP08048 801 aaPredicted RBP9.2□□□□□ -0.94
FNTA-213ENST00000533559 HSP90B1P14625 803 aaKnown RBP9.2□□□□□ -0.94
FNTA-213ENST00000533559 PTPN12Q05209 780 aaKnown RBP9.2□□□□□ -0.94
FNTA-213ENST00000533559 FSTL1Q12841 308 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 TRIM28Q13263 835 aaKnown RBP9.2□□□□□ -0.94
FNTA-213ENST00000533559 NMIQ13287 307 aaPredicted RBP9.2□□□□□ -0.94
FNTA-213ENST00000533559 MCMDC2Q4G0Z9 681 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
FNTA-213ENST00000533559 LRP10Q7Z4F1 713 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 KAZALD1Q96I82 304 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 CCDC8Q9H0W5 538 aaPredicted RBP9.2□□□□□ -0.94
FNTA-213ENST00000533559 SIL1Q9H173 461 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 BOLA2Q9H3K6 86 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 TSPY26PQ9H489 355 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 PIM2Q9P1W9 311 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 SRP68Q9UHB9 627 aaKnown RBP9.2□□□□□ -0.94
FNTA-213ENST00000533559 USP16Q9Y5T5 823 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 DICER1Q9UPY3 1922 aaKnown RBP9.2□□□□□ -0.94
FNTA-213ENST00000533559 ABCC12Q96J65 1359 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 MED23Q9ULK4 1368 aa9.2□□□□□ -0.94
FNTA-213ENST00000533559 SCN7AQ01118 1682 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms