RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 USP50Q70EL3 339 aaPredicted RBP11.76□□□□□ -0.53
ZNF250-209ENST00000533543 CNTROBQ8N137 903 aa11.76□□□□□ -0.53
ZNF250-209ENST00000533543 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
ZNF250-209ENST00000533543 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
ZNF250-209ENST00000533543 SUCLG2Q96I99 432 aa11.76□□□□□ -0.53
ZNF250-209ENST00000533543 ADARB2Q9NS39 739 aaKnown RBP11.76□□□□□ -0.53
ZNF250-209ENST00000533543 ADAMTSL1Q8N6G6 1762 aa11.76□□□□□ -0.53
ZNF250-209ENST00000533543 CT47B1P0C2W7 299 aaPredicted RBP11.75□□□□□ -0.53
ZNF250-209ENST00000533543 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
ZNF250-209ENST00000533543 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
ZNF250-209ENST00000533543 TRPM4Q8TD43 1214 aa11.75□□□□□ -0.53
ZNF250-209ENST00000533543 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
ZNF250-209ENST00000533543 CNOT7Q9UIV1 285 aaKnown RBP11.75□□□□□ -0.53
ZNF250-209ENST00000533543 GALR2O43603 387 aaPredicted RBP11.74□□□□□ -0.53
ZNF250-209ENST00000533543 KLRK1P26718 216 aa11.74□□□□□ -0.53
ZNF250-209ENST00000533543 HNRNPUQ00839 825 aaKnown RBP eCLIP11.74□□□□□ -0.53
ZNF250-209ENST00000533543 CHRNDQ07001 517 aa11.74□□□□□ -0.53
ZNF250-209ENST00000533543 DPF2Q92785 391 aa11.74□□□□□ -0.53
ZNF250-209ENST00000533543 KAZALD1Q96I82 304 aa11.74□□□□□ -0.53
ZNF250-209ENST00000533543 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
ZNF250-209ENST00000533543 ANKRD2Q9GZV1 360 aa11.74□□□□□ -0.53
ZNF250-209ENST00000533543 LEMD3Q9Y2U8 911 aa11.74□□□□□ -0.53
ZNF250-209ENST00000533543 MED23Q9ULK4 1368 aa11.74□□□□□ -0.53
ZNF250-209ENST00000533543 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
ZNF250-209ENST00000533543 ZNF804BA4D1E1 1349 aa11.73□□□□□ -0.53
ZNF250-209ENST00000533543 H7C1D1 291 aa11.73□□□□□ -0.53
ZNF250-209ENST00000533543 UTYO14607 1347 aa11.73□□□□□ -0.53
ZNF250-209ENST00000533543 VIL1P09327 827 aaKnown RBP11.73□□□□□ -0.53
ZNF250-209ENST00000533543 RPS12P25398 132 aaKnown RBP11.73□□□□□ -0.53
ZNF250-209ENST00000533543 KCNJ4P48050 445 aa11.73□□□□□ -0.53
ZNF250-209ENST00000533543 HIRAP54198 1017 aaPredicted RBP11.73□□□□□ -0.53
ZNF250-209ENST00000533543 FMR1Q06787 632 aaKnown RBP eCLIP11.73□□□□□ -0.53
ZNF250-209ENST00000533543 SCN9AQ15858 1988 aa11.73□□□□□ -0.53
ZNF250-209ENST00000533543 CCDC57Q2TAC2 916 aa11.73□□□□□ -0.53
ZNF250-209ENST00000533543 TAF7LQ5H9L4 462 aa11.73□□□□□ -0.53
ZNF250-209ENST00000533543 TXNRD3Q86VQ6 643 aa11.73□□□□□ -0.53
ZNF250-209ENST00000533543 HELBQ8NG08 1087 aaPredicted RBP11.73□□□□□ -0.53
ZNF250-209ENST00000533543 NOB1Q9ULX3 412 aaKnown RBP11.73□□□□□ -0.53
ZNF250-209ENST00000533543 TMEM88BA6NKF7 163 aa11.72□□□□□ -0.53
ZNF250-209ENST00000533543 SNAP23O00161 211 aa11.72□□□□□ -0.53
ZNF250-209ENST00000533543 TRAF5O00463 557 aa11.72□□□□□ -0.53
ZNF250-209ENST00000533543 TAF5LO75529 589 aa11.72□□□□□ -0.53
ZNF250-209ENST00000533543 RARSP54136 660 aaKnown RBP11.72□□□□□ -0.53
ZNF250-209ENST00000533543 TBC1D10BQ4KMP7 808 aaPredicted RBP11.72□□□□□ -0.53
ZNF250-209ENST00000533543 RSBN1LQ6PCB5 846 aaPredicted RBP11.72□□□□□ -0.53
ZNF250-209ENST00000533543 SAMD7Q7Z3H4 446 aa11.72□□□□□ -0.53
ZNF250-209ENST00000533543 PODNQ7Z5L7 613 aa11.72□□□□□ -0.53
ZNF250-209ENST00000533543 BICC1Q9H694 974 aaKnown RBP11.72□□□□□ -0.53
ZNF250-209ENST00000533543 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
ZNF250-209ENST00000533543 USP17L3A6NCW0 530 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 USP17L4A6NCW7 530 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 EGFRP00533 1210 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.53
ZNF250-209ENST00000533543 RBM26Q5T8P6 1007 aaKnown RBP11.71□□□□□ -0.53
ZNF250-209ENST00000533543 LDHAL6AQ6ZMR3 332 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 USP17L1Q7RTZ2 530 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 ANKRD44Q8N8A2 993 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 FBXW7Q969H0 707 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 KIF12Q96FN5 646 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 GLIS2Q9BZE0 524 aaPredicted RBP11.71□□□□□ -0.53
ZNF250-209ENST00000533543 COA1Q9GZY4 146 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 USP44Q9H0E7 712 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 CNNM1Q9NRU3 951 aa11.71□□□□□ -0.53
ZNF250-209ENST00000533543 PCNTO95613 3336 aa11.71□□□□□ -0.54
ZNF250-209ENST00000533543 PLIN1O60240 522 aa11.7□□□□□ -0.54
ZNF250-209ENST00000533543 RABL6Q3YEC7 729 aaPredicted RBP11.7□□□□□ -0.54
ZNF250-209ENST00000533543 JMYQ8N9B5 988 aa11.7□□□□□ -0.54
ZNF250-209ENST00000533543 AGBL3Q8NEM8 1001 aa11.7□□□□□ -0.54
ZNF250-209ENST00000533543 ZC3H15Q8WU90 426 aaKnown RBP11.7□□□□□ -0.54
ZNF250-209ENST00000533543 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
ZNF250-209ENST00000533543 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
ZNF250-209ENST00000533543 API5Q9BZZ5 524 aaKnown RBP11.7□□□□□ -0.54
ZNF250-209ENST00000533543 PGAP2Q9UHJ9 254 aa11.7□□□□□ -0.54
ZNF250-209ENST00000533543 IRS2Q9Y4H2 1338 aa11.69□□□□□ -0.54
ZNF250-209ENST00000533543 KIF4BQ2VIQ3 1234 aa11.69□□□□□ -0.54
ZNF250-209ENST00000533543 GMLQ99445 158 aa11.69□□□□□ -0.54
ZNF250-209ENST00000533543 ZNF609O15014 1411 aa11.69□□□□□ -0.54
ZNF250-209ENST00000533543 CNTNAP1P78357 1384 aa11.68□□□□□ -0.54
ZNF250-209ENST00000533543 KIF16BQ96L93 1317 aa11.68□□□□□ -0.54
ZNF250-209ENST00000533543 ZNF280AP59817 542 aaPredicted RBP11.68□□□□□ -0.54
ZNF250-209ENST00000533543 DACT2Q5SW24 774 aa11.68□□□□□ -0.54
ZNF250-209ENST00000533543 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
ZNF250-209ENST00000533543 CD209Q9NNX6 404 aa11.68□□□□□ -0.54
ZNF250-209ENST00000533543 ABT1Q9ULW3 272 aaKnown RBP11.68□□□□□ -0.54
ZNF250-209ENST00000533543 ASTN2O75129 1339 aaPredicted RBP11.67□□□□□ -0.54
ZNF250-209ENST00000533543 BCAR3O75815 825 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 CELF2O95319 508 aaKnown RBP11.67□□□□□ -0.54
ZNF250-209ENST00000533543 USP17L8P0C7I0 530 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 GTF2IP78347 998 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 LRRC24Q50LG9 513 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 STRIP1Q5VSL9 837 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 CST9Q5W186 159 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 TTLL5Q6EMB2 1281 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 DLK2Q6UY11 383 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 C15orf52Q6ZUT6 534 aaKnown RBP11.67□□□□□ -0.54
ZNF250-209ENST00000533543 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 USP48Q86UV5 1035 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 KLHDC4Q8TBB5 520 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 MS4A3Q96HJ5 214 aa11.67□□□□□ -0.54
ZNF250-209ENST00000533543 RIPOR2Q9Y4F9 1068 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms