RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 USP17L4A6NCW7 530 aa16.22■□□□□ 0.19
TRAPPC4-212ENST00000533058 HIRAP54198 1017 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-212ENST00000533058 TAF7LQ5H9L4 462 aa16.22■□□□□ 0.19
TRAPPC4-212ENST00000533058 RSBN1LQ6PCB5 846 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-212ENST00000533058 USP17L1Q7RTZ2 530 aa16.22■□□□□ 0.19
TRAPPC4-212ENST00000533058 DZIP1LQ8IYY4 767 aaKnown RBP16.22■□□□□ 0.19
TRAPPC4-212ENST00000533058 ANKRD44Q8N8A2 993 aa16.22■□□□□ 0.19
TRAPPC4-212ENST00000533058 GMLQ99445 158 aa16.22■□□□□ 0.19
TRAPPC4-212ENST00000533058 IRS2Q9Y4H2 1338 aa16.21■□□□□ 0.19
TRAPPC4-212ENST00000533058 TMEM88BA6NKF7 163 aa16.21■□□□□ 0.19
TRAPPC4-212ENST00000533058 MS4A1P11836 297 aa16.21■□□□□ 0.19
TRAPPC4-212ENST00000533058 MMP14P50281 582 aa16.21■□□□□ 0.19
TRAPPC4-212ENST00000533058 STRIP1Q5VSL9 837 aa16.21■□□□□ 0.19
TRAPPC4-212ENST00000533058 TXNRD3Q86VQ6 643 aa16.21■□□□□ 0.19
TRAPPC4-212ENST00000533058 ZNF594Q96JF6 807 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC4-212ENST00000533058 HDAC5Q9UQL6 1122 aa16.21■□□□□ 0.19
TRAPPC4-212ENST00000533058 KCNJ4P48050 445 aa16.2■□□□□ 0.18
TRAPPC4-212ENST00000533058 ZNF280AP59817 542 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-212ENST00000533058 INTS3Q68E01 1043 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-212ENST00000533058 ITPRIPQ8IWB1 547 aa16.2■□□□□ 0.18
TRAPPC4-212ENST00000533058 TRPM4Q8TD43 1214 aa16.2■□□□□ 0.18
TRAPPC4-212ENST00000533058 CNNM1Q9NRU3 951 aa16.2■□□□□ 0.18
TRAPPC4-212ENST00000533058 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
TRAPPC4-212ENST00000533058 SCN9AQ15858 1988 aa16.19■□□□□ 0.18
TRAPPC4-212ENST00000533058 SHTN1A0MZ66 631 aa16.19■□□□□ 0.18
TRAPPC4-212ENST00000533058 TAF5LO75529 589 aa16.19■□□□□ 0.18
TRAPPC4-212ENST00000533058 UBE4AQ14139 1066 aa16.19■□□□□ 0.18
TRAPPC4-212ENST00000533058 DACT2Q5SW24 774 aa16.19■□□□□ 0.18
TRAPPC4-212ENST00000533058 TMEM57Q8N5G2 664 aa16.19■□□□□ 0.18
TRAPPC4-212ENST00000533058 RIPOR2Q9Y4F9 1068 aa16.19■□□□□ 0.18
TRAPPC4-212ENST00000533058 MROH5Q6ZUA9 1318 aa16.19■□□□□ 0.18
TRAPPC4-212ENST00000533058 USP17L8P0C7I0 530 aa16.18■□□□□ 0.18
TRAPPC4-212ENST00000533058 KLRK1P26718 216 aa16.18■□□□□ 0.18
TRAPPC4-212ENST00000533058 CDC37L1Q7L3B6 337 aa16.18■□□□□ 0.18
TRAPPC4-212ENST00000533058 SAMD7Q7Z3H4 446 aa16.18■□□□□ 0.18
TRAPPC4-212ENST00000533058 HELBQ8NG08 1087 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-212ENST00000533058 PANK1Q8TE04 598 aa16.18■□□□□ 0.18
TRAPPC4-212ENST00000533058 CD209Q9NNX6 404 aa16.18■□□□□ 0.18
TRAPPC4-212ENST00000533058 UBTFL1P0CB47 393 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC4-212ENST00000533058 IL1R1P14778 569 aa16.17■□□□□ 0.18
TRAPPC4-212ENST00000533058 PUS3Q9BZE2 481 aaKnown RBP16.17■□□□□ 0.18
TRAPPC4-212ENST00000533058 SPEF2Q9C093 1822 aa16.17■□□□□ 0.18
TRAPPC4-212ENST00000533058 SNAP23O00161 211 aa16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 EGFRP00533 1210 aa16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 RLBP1P12271 317 aa16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 RFX5P48382 616 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 RRP1P56182 461 aaKnown RBP16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 KIF4BQ2VIQ3 1234 aa16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 TBC1D10BQ4KMP7 808 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 TTLL5Q6EMB2 1281 aa16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 ZNF804AQ7Z570 1209 aa16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 FBXO3Q9UK99 471 aa16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 PSME4Q14997 1843 aa16.16■□□□□ 0.18
TRAPPC4-212ENST00000533058 CNTNAP1P78357 1384 aa16.15■□□□□ 0.18
TRAPPC4-212ENST00000533058 RASSF10A6NK89 507 aa16.15■□□□□ 0.18
TRAPPC4-212ENST00000533058 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC4-212ENST00000533058 FKBP1AP62942 108 aaKnown RBP16.15■□□□□ 0.18
TRAPPC4-212ENST00000533058 TRAF5O00463 557 aa16.14■□□□□ 0.17
TRAPPC4-212ENST00000533058 PDE8BO95263 885 aa16.14■□□□□ 0.17
TRAPPC4-212ENST00000533058 GNAI3P08754 354 aa16.14■□□□□ 0.17
TRAPPC4-212ENST00000533058 CST9Q5W186 159 aa16.14■□□□□ 0.17
TRAPPC4-212ENST00000533058 OGFOD1Q8N543 542 aa16.14■□□□□ 0.17
TRAPPC4-212ENST00000533058 DCPSQ96C86 337 aaKnown RBP16.14■□□□□ 0.17
TRAPPC4-212ENST00000533058 GLIS2Q9BZE0 524 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC4-212ENST00000533058 MYOZ2Q9NPC6 264 aa16.14■□□□□ 0.17
TRAPPC4-212ENST00000533058 COG6Q9Y2V7 657 aa16.14■□□□□ 0.17
TRAPPC4-212ENST00000533058 SUPT16HQ9Y5B9 1047 aaKnown RBP16.14■□□□□ 0.17
TRAPPC4-212ENST00000533058 EYA2O00167 538 aa16.13■□□□□ 0.17
TRAPPC4-212ENST00000533058 SASH1O94885 1247 aa16.13■□□□□ 0.17
TRAPPC4-212ENST00000533058 GTF2IP78347 998 aa16.13■□□□□ 0.17
TRAPPC4-212ENST00000533058 PTPN12Q05209 780 aaKnown RBP16.13■□□□□ 0.17
TRAPPC4-212ENST00000533058 PDE3AQ14432 1141 aa16.13■□□□□ 0.17
TRAPPC4-212ENST00000533058 LRRC24Q50LG9 513 aa16.13■□□□□ 0.17
TRAPPC4-212ENST00000533058 RBM26Q5T8P6 1007 aaKnown RBP16.13■□□□□ 0.17
TRAPPC4-212ENST00000533058 C20orf194Q5TEA3 1177 aa16.13■□□□□ 0.17
TRAPPC4-212ENST00000533058 VGLL2Q8N8G2 317 aa16.13■□□□□ 0.17
TRAPPC4-212ENST00000533058 MEIS3Q99687 375 aa16.13■□□□□ 0.17
TRAPPC4-212ENST00000533058 FMR1Q06787 632 aaKnown RBP eCLIP16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 SCARF1Q14162 830 aa16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 MVPQ14764 893 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 DEFB115Q30KQ5 88 aa16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 METTL24Q5JXM2 366 aa16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 TDRD7Q8NHU6 1098 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 FAM84BQ96KN1 310 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 MKRN1Q9UHC7 482 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 LRRFIP2Q9Y608 721 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 TLL2Q9Y6L7 1015 aa16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 FAM205AQ6ZU69 1335 aa16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 PITPNM2Q9BZ72 1349 aa16.12■□□□□ 0.17
TRAPPC4-212ENST00000533058 CIAO1O76071 339 aa16.11■□□□□ 0.17
TRAPPC4-212ENST00000533058 HIBADHP31937 336 aaKnown RBP16.11■□□□□ 0.17
TRAPPC4-212ENST00000533058 MTX1Q13505 466 aa16.11■□□□□ 0.17
TRAPPC4-212ENST00000533058 KRT26Q7Z3Y9 468 aa16.11■□□□□ 0.17
TRAPPC4-212ENST00000533058 FBXO33Q7Z6M2 555 aa16.11■□□□□ 0.17
TRAPPC4-212ENST00000533058 USP48Q86UV5 1035 aa16.11■□□□□ 0.17
TRAPPC4-212ENST00000533058 KLHDC4Q8TBB5 520 aa16.11■□□□□ 0.17
TRAPPC4-212ENST00000533058 HHIPL1Q96JK4 782 aa16.11■□□□□ 0.17
TRAPPC4-212ENST00000533058 MXD3Q9BW11 206 aa16.11■□□□□ 0.17
TRAPPC4-212ENST00000533058 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
TRAPPC4-212ENST00000533058 A0A1B0GUL6 1792 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms