RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SYCP1Q15431 976 aa17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 SSH2Q76I76 1423 aa17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 URI1O94763 535 aaPredicted RBP17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 UBA7P41226 1012 aa17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 ODF2Q5BJF6 829 aa17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 ZNF830Q96NB3 372 aaPredicted RBP17.64■□□□□ 0.41
PCDHA3-202ENST00000532566 CCDC96Q2M329 555 aa17.63■□□□□ 0.41
PCDHA3-202ENST00000532566 TMEM266Q2M3C6 531 aa17.63■□□□□ 0.41
PCDHA3-202ENST00000532566 CCDC186Q7Z3E2 898 aa17.63■□□□□ 0.41
PCDHA3-202ENST00000532566 MARCKSP29966 332 aaPredicted RBP17.63■□□□□ 0.41
PCDHA3-202ENST00000532566 ZNF397Q8NF99 534 aaPredicted RBP17.63■□□□□ 0.41
PCDHA3-202ENST00000532566 TCP11L1Q9NUJ3 509 aa17.63■□□□□ 0.41
PCDHA3-202ENST00000532566 STX8Q9UNK0 236 aa17.63■□□□□ 0.41
PCDHA3-202ENST00000532566 TM6SF1Q9BZW5 370 aa17.63■□□□□ 0.41
PCDHA3-202ENST00000532566 KDRP35968 1356 aa17.62■□□□□ 0.41
PCDHA3-202ENST00000532566 BRAPQ7Z569 592 aa17.62■□□□□ 0.41
PCDHA3-202ENST00000532566 MAGEB6Q8N7X4 407 aa17.62■□□□□ 0.41
PCDHA3-202ENST00000532566 CCDC150Q8NCX0 1101 aa17.62■□□□□ 0.41
PCDHA3-202ENST00000532566 PRIMPOLQ96LW4 560 aa17.62■□□□□ 0.41
PCDHA3-202ENST00000532566 ATL3Q6DD88 541 aa17.62■□□□□ 0.41
PCDHA3-202ENST00000532566 ZNF594Q96JF6 807 aaPredicted RBP17.62■□□□□ 0.41
PCDHA3-202ENST00000532566 KIF5CO60282 957 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 NOLC1Q14978 699 aaKnown RBP eCLIP17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 FKBP15Q5T1M5 1219 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 TTC12Q9H892 705 aaPredicted RBP17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 PHKG2P15735 406 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 ITGA6P23229 1130 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 GSTO1P78417 241 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 ZFYVE27Q5T4F4 411 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 CPLX3Q8WVH0 158 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 APPBP2Q92624 585 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 DDX17Q92841 729 aaKnown RBP17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 PHF23Q9BUL5 403 aaPredicted RBP17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 MYO6Q9UM54 1294 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 SH3TC1Q8TE82 1336 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 ATP5JP18859 108 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 ZNF445P59923 1031 aa17.61■□□□□ 0.41
PCDHA3-202ENST00000532566 MAGEB6P1A0A0J9YX57 407 aa17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 RBSNQ9H1K0 784 aa17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 OSBPL3Q9H4L5 887 aa17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 LMBRD1Q9NUN5 540 aa17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 CCDC66A2RUB6 948 aa17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 SLC4A8Q2Y0W8 1093 aa17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 XAGE2Q96GT9 111 aa17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 EIF3JO75822 258 aaKnown RBP17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 BRD1O95696 1058 aa17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 AOPEPQ8N6M6 819 aa17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 SETQ01105 290 aaPredicted RBP17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 IQCEQ6IPM2 695 aa17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 EAF2Q96CJ1 260 aaPredicted RBP17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 LLPHQ9BRT6 129 aaKnown RBP17.6■□□□□ 0.41
PCDHA3-202ENST00000532566 GLI2P10070 1586 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 MIGA1Q8NAN2 632 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 STAP2Q9UGK3 403 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 KIF4BQ2VIQ3 1234 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 AXDND1Q5T1B0 1012 aaPredicted RBP17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 UBASH3AP57075 661 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 TMCO3Q6UWJ1 677 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 DNAJC10Q8IXB1 793 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 VAT1LQ9HCJ6 419 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 PPP1R1BQ9UD71 204 aaPredicted RBP17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 GNAQP50148 359 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 ARHGEF25Q86VW2 580 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 NUP88Q99567 741 aaPredicted RBP17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 NYXQ9GZU5 481 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 PALD1Q9ULE6 856 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 NDUFB9Q9Y6M9 179 aa17.59■□□□□ 0.41
PCDHA3-202ENST00000532566 TSPOAP1O95153 1857 aa17.58■□□□□ 0.41
PCDHA3-202ENST00000532566 FGFR1OPO95684 399 aaKnown RBP17.58■□□□□ 0.41
PCDHA3-202ENST00000532566 SNW1Q13573 536 aaKnown RBP17.58■□□□□ 0.41
PCDHA3-202ENST00000532566 CCDC178Q5BJE1 867 aa17.58■□□□□ 0.41
PCDHA3-202ENST00000532566 TPTE2Q6XPS3 522 aa17.58■□□□□ 0.41
PCDHA3-202ENST00000532566 TSG101Q99816 390 aa17.58■□□□□ 0.41
PCDHA3-202ENST00000532566 CWC15Q9P013 229 aaKnown RBP17.58■□□□□ 0.41
PCDHA3-202ENST00000532566 E9PCH4 1651 aa17.58■□□□□ 0.41
PCDHA3-202ENST00000532566 TRIM75PA6NK02 468 aa17.58■□□□□ 0.4
PCDHA3-202ENST00000532566 DYNC1I1O14576 645 aa17.58■□□□□ 0.4
PCDHA3-202ENST00000532566 TOM1O60784 492 aa17.58■□□□□ 0.4
PCDHA3-202ENST00000532566 SPA17Q15506 151 aa17.58■□□□□ 0.4
PCDHA3-202ENST00000532566 FAM173BQ6P4H8 233 aa17.58■□□□□ 0.4
PCDHA3-202ENST00000532566 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.4
PCDHA3-202ENST00000532566 CCDC148Q8NFR7 591 aa17.58■□□□□ 0.4
PCDHA3-202ENST00000532566 MBD4O95243 580 aa17.58■□□□□ 0.4
PCDHA3-202ENST00000532566 SKILP12757 684 aa17.58■□□□□ 0.4
PCDHA3-202ENST00000532566 CALML4Q96GE6 196 aa17.58■□□□□ 0.4
PCDHA3-202ENST00000532566 ERVV-2B6SEH9 535 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 PDE8AO60658 829 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 AMPD3Q01432 767 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 PARP10Q53GL7 1025 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 GOLGA6L9A6NEM1 432 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 YEATS4O95619 227 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 CASQ1P31415 396 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 TSPY3P0CV98 308 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 TSPY8P0CW00 308 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 CALM1P0DP23 149 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 CALM2P0DP24 149 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 CALM3P0DP25 149 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 PUM3Q15397 648 aaKnown RBP17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 A2ML1A8K2U0 1454 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms