RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 MAGEC2Q9UBF1 373 aaPredicted RBP13.56□□□□□ -0.24
CSRP1-215ENST00000532313 DACH1Q9UI36 760 aa13.56□□□□□ -0.24
CSRP1-215ENST00000532313 MATR3P43243 847 aaKnown RBP eCLIP13.56□□□□□ -0.24
CSRP1-215ENST00000532313 PLS1Q14651 629 aa13.56□□□□□ -0.24
CSRP1-215ENST00000532313 ADAMTS13Q76LX8 1427 aa13.56□□□□□ -0.24
CSRP1-215ENST00000532313 ZBTB7AO95365 584 aa13.56□□□□□ -0.24
CSRP1-215ENST00000532313 PPRC1Q5VV67 1664 aaKnown RBP13.55□□□□□ -0.24
CSRP1-215ENST00000532313 MYO3BQ8WXR4 1341 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 SPDYE4A6NLX3 237 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 RNF113AO15541 343 aaKnown RBP13.55□□□□□ -0.24
CSRP1-215ENST00000532313 KINO60870 393 aaKnown RBP13.55□□□□□ -0.24
CSRP1-215ENST00000532313 OFD1O75665 1012 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 MCM5P33992 734 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 MCMDC2Q4G0Z9 681 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 UBE4AQ14139 1066 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 WTAPQ15007 396 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 CIAPIN1Q6FI81 312 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 SYCP1Q15431 976 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 GLT8D2Q9H1C3 349 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 SPC25Q9HBM1 224 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 CCDC39Q9UFE4 941 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 SSH2Q76I76 1423 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 RTL9Q8NET4 1388 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 NLRP5P59047 1200 aa13.55□□□□□ -0.24
CSRP1-215ENST00000532313 SMCR8Q8TEV9 937 aaPredicted RBP13.55□□□□□ -0.24
CSRP1-215ENST00000532313 CARMIL3Q8ND23 1372 aa13.54□□□□□ -0.24
CSRP1-215ENST00000532313 CCDC184Q52MB2 194 aa13.54□□□□□ -0.24
CSRP1-215ENST00000532313 IFIT1BQ5T764 474 aaKnown RBP13.54□□□□□ -0.24
CSRP1-215ENST00000532313 CFAP45Q9UL16 551 aa13.54□□□□□ -0.24
CSRP1-215ENST00000532313 R3HDM1Q15032 1099 aaKnown RBP13.54□□□□□ -0.24
CSRP1-215ENST00000532313 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
CSRP1-215ENST00000532313 KDRP35968 1356 aa13.54□□□□□ -0.24
CSRP1-215ENST00000532313 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
CSRP1-215ENST00000532313 STXBP4Q6ZWJ1 553 aa13.54□□□□□ -0.24
CSRP1-215ENST00000532313 MAGEB6Q8N7X4 407 aa13.54□□□□□ -0.24
CSRP1-215ENST00000532313 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
CSRP1-215ENST00000532313 ZHX3Q9H4I2 956 aa13.54□□□□□ -0.24
CSRP1-215ENST00000532313 USP16Q9Y5T5 823 aa13.54□□□□□ -0.24
CSRP1-215ENST00000532313 PRPF40BQ6NWY9 871 aaKnown RBP13.53□□□□□ -0.24
CSRP1-215ENST00000532313 ERMNQ8TAM6 284 aa13.53□□□□□ -0.24
CSRP1-215ENST00000532313 PYM1Q9BRP8 204 aaKnown RBP13.53□□□□□ -0.24
CSRP1-215ENST00000532313 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
CSRP1-215ENST00000532313 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
CSRP1-215ENST00000532313 ZBED4O75132 1171 aa13.53□□□□□ -0.24
CSRP1-215ENST00000532313 NCBP1Q09161 790 aaKnown RBP13.53□□□□□ -0.24
CSRP1-215ENST00000532313 MFSD14BQ5SR56 506 aa13.53□□□□□ -0.24
CSRP1-215ENST00000532313 SMARCA5O60264 1052 aaPredicted RBP13.53□□□□□ -0.24
CSRP1-215ENST00000532313 KDM4AO75164 1064 aa13.53□□□□□ -0.24
CSRP1-215ENST00000532313 GTF2IP78347 998 aa13.53□□□□□ -0.24
CSRP1-215ENST00000532313 TFCP2Q12800 502 aa13.53□□□□□ -0.24
CSRP1-215ENST00000532313 TTLL5Q6EMB2 1281 aa13.53□□□□□ -0.24
CSRP1-215ENST00000532313 TTF2Q9UNY4 1162 aaKnown RBP13.53□□□□□ -0.24
CSRP1-215ENST00000532313 SSBP05455 408 aaKnown RBP eCLIP13.53□□□□□ -0.24
CSRP1-215ENST00000532313 GOPCQ9HD26 462 aa13.53□□□□□ -0.24
CSRP1-215ENST00000532313 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.24
CSRP1-215ENST00000532313 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.24
CSRP1-215ENST00000532313 LRRC27Q9C0I9 530 aa13.52□□□□□ -0.24
CSRP1-215ENST00000532313 RAD50Q92878 1312 aa13.52□□□□□ -0.24
CSRP1-215ENST00000532313 WDR33Q9C0J8 1336 aaKnown RBP13.52□□□□□ -0.24
CSRP1-215ENST00000532313 A0A1B0GUL7 405 aa13.52□□□□□ -0.24
CSRP1-215ENST00000532313 NBPF7P0C2Y1 421 aaPredicted RBP13.52□□□□□ -0.24
CSRP1-215ENST00000532313 CASTP20810 708 aaKnown RBP13.52□□□□□ -0.24
CSRP1-215ENST00000532313 HDAC1Q13547 482 aaPredicted RBP13.52□□□□□ -0.24
CSRP1-215ENST00000532313 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.24
CSRP1-215ENST00000532313 IPO9Q96P70 1041 aaKnown RBP13.52□□□□□ -0.24
CSRP1-215ENST00000532313 STK3Q13188 491 aa13.52□□□□□ -0.25
CSRP1-215ENST00000532313 LARP1BQ659C4 914 aaKnown RBP13.52□□□□□ -0.25
CSRP1-215ENST00000532313 APBB1IPQ7Z5R6 666 aaPredicted RBP13.52□□□□□ -0.25
CSRP1-215ENST00000532313 C2orf69Q8N8R5 385 aa13.52□□□□□ -0.25
CSRP1-215ENST00000532313 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
CSRP1-215ENST00000532313 ABT1Q9ULW3 272 aaKnown RBP13.52□□□□□ -0.25
CSRP1-215ENST00000532313 NRXN1Q9ULB1 1477 aa13.52□□□□□ -0.25
CSRP1-215ENST00000532313 CCNA1P78396 465 aa13.51□□□□□ -0.25
CSRP1-215ENST00000532313 TMED8Q6PL24 325 aaPredicted RBP13.51□□□□□ -0.25
CSRP1-215ENST00000532313 MSNP26038 577 aaKnown RBP13.51□□□□□ -0.25
CSRP1-215ENST00000532313 IREB2P48200 963 aaKnown RBP13.51□□□□□ -0.25
CSRP1-215ENST00000532313 GRAPQ13588 217 aa13.51□□□□□ -0.25
CSRP1-215ENST00000532313 FILIP1LQ4L180 1135 aa13.51□□□□□ -0.25
CSRP1-215ENST00000532313 GRAPLQ8TC17 118 aaPredicted RBP13.51□□□□□ -0.25
CSRP1-215ENST00000532313 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
CSRP1-215ENST00000532313 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
CSRP1-215ENST00000532313 PIBF1Q8WXW3 757 aa13.51□□□□□ -0.25
CSRP1-215ENST00000532313 ZNF804BA4D1E1 1349 aa13.51□□□□□ -0.25
CSRP1-215ENST00000532313 IARSP41252 1262 aaKnown RBP13.5□□□□□ -0.25
CSRP1-215ENST00000532313 PREX1Q8TCU6 1659 aa13.5□□□□□ -0.25
CSRP1-215ENST00000532313 USP19O94966 1318 aa13.5□□□□□ -0.25
CSRP1-215ENST00000532313 BMP15O95972 392 aa13.5□□□□□ -0.25
CSRP1-215ENST00000532313 PAF1Q8N7H5 531 aa13.5□□□□□ -0.25
CSRP1-215ENST00000532313 RRP36Q96EU6 259 aaKnown RBP13.5□□□□□ -0.25
CSRP1-215ENST00000532313 HELLSQ9NRZ9 838 aa13.5□□□□□ -0.25
CSRP1-215ENST00000532313 TECPR2O15040 1411 aa13.5□□□□□ -0.25
CSRP1-215ENST00000532313 PSDA5PKW4 1024 aaPredicted RBP13.5□□□□□ -0.25
CSRP1-215ENST00000532313 SMC2O95347 1197 aa13.5□□□□□ -0.25
CSRP1-215ENST00000532313 KRT85P78386 507 aa13.5□□□□□ -0.25
CSRP1-215ENST00000532313 TSPYL6Q8N831 410 aa13.5□□□□□ -0.25
CSRP1-215ENST00000532313 SPDYE3A6NKU9 549 aa13.49□□□□□ -0.25
CSRP1-215ENST00000532313 CEP57L1Q8IYX8 460 aa13.49□□□□□ -0.25
CSRP1-215ENST00000532313 XAGE2Q96GT9 111 aa13.49□□□□□ -0.25
CSRP1-215ENST00000532313 RNF181Q9P0P0 153 aa13.49□□□□□ -0.25
CSRP1-215ENST00000532313 CCDC24Q8N4L8 307 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms