RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.14■□□□□ 0.5
SRPRA-206ENST00000532259 GDPD2Q9HCC8 539 aa18.14■□□□□ 0.5
SRPRA-206ENST00000532259 HELLSQ9NRZ9 838 aa18.14■□□□□ 0.5
SRPRA-206ENST00000532259 SMC3Q9UQE7 1217 aa18.14■□□□□ 0.5
SRPRA-206ENST00000532259 CICQ96RK0 1608 aaPredicted RBP18.14■□□□□ 0.49
SRPRA-206ENST00000532259 RPS6KB1P23443 525 aa18.14■□□□□ 0.49
SRPRA-206ENST00000532259 TOB2Q14106 344 aaPredicted RBP18.14■□□□□ 0.49
SRPRA-206ENST00000532259 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
SRPRA-206ENST00000532259 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
SRPRA-206ENST00000532259 FOXP2O15409 715 aa18.13■□□□□ 0.49
SRPRA-206ENST00000532259 FGFR2P21802 821 aa18.13■□□□□ 0.49
SRPRA-206ENST00000532259 CCDC152Q4G0S7 254 aa18.13■□□□□ 0.49
SRPRA-206ENST00000532259 PIH1D3Q9NQM4 214 aaKnown RBP18.13■□□□□ 0.49
SRPRA-206ENST00000532259 AKAP11Q9UKA4 1901 aa18.13■□□□□ 0.49
SRPRA-206ENST00000532259 PHF14O94880 888 aa18.13■□□□□ 0.49
SRPRA-206ENST00000532259 CNTNAP4Q9C0A0 1308 aa18.13■□□□□ 0.49
SRPRA-206ENST00000532259 LMBRD1Q9NUN5 540 aa18.13■□□□□ 0.49
SRPRA-206ENST00000532259 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
SRPRA-206ENST00000532259 MYO5AQ9Y4I1 1855 aaKnown RBP18.12■□□□□ 0.49
SRPRA-206ENST00000532259 SPEF2Q9C093 1822 aa18.12■□□□□ 0.49
SRPRA-206ENST00000532259 GJB2P29033 226 aa18.12■□□□□ 0.49
SRPRA-206ENST00000532259 PUM3Q15397 648 aaKnown RBP18.12■□□□□ 0.49
SRPRA-206ENST00000532259 NEK1Q96PY6 1258 aa18.12■□□□□ 0.49
SRPRA-206ENST00000532259 HAND2P61296 217 aa18.12■□□□□ 0.49
SRPRA-206ENST00000532259 TSGA10IPQ3SY00 556 aa18.12■□□□□ 0.49
SRPRA-206ENST00000532259 CLEC4GQ6UXB4 293 aa18.12■□□□□ 0.49
SRPRA-206ENST00000532259 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
SRPRA-206ENST00000532259 AK7Q96M32 723 aa18.12■□□□□ 0.49
SRPRA-206ENST00000532259 HMG20BQ9P0W2 317 aa18.12■□□□□ 0.49
SRPRA-206ENST00000532259 MROH5Q6ZUA9 1318 aa18.11■□□□□ 0.49
SRPRA-206ENST00000532259 IDH1O75874 414 aaKnown RBP18.11■□□□□ 0.49
SRPRA-206ENST00000532259 LPIN2Q92539 896 aa18.11■□□□□ 0.49
SRPRA-206ENST00000532259 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.11■□□□□ 0.49
SRPRA-206ENST00000532259 ABCC12Q96J65 1359 aa18.11■□□□□ 0.49
SRPRA-206ENST00000532259 RPS6KA4O75676 772 aa18.11■□□□□ 0.49
SRPRA-206ENST00000532259 SYT1P21579 422 aa18.11■□□□□ 0.49
SRPRA-206ENST00000532259 GTF2E1P29083 439 aaPredicted RBP18.11■□□□□ 0.49
SRPRA-206ENST00000532259 LRP5O75197 1615 aa18.1■□□□□ 0.49
SRPRA-206ENST00000532259 GOLGA6L3A6NEY3 463 aa18.1■□□□□ 0.49
SRPRA-206ENST00000532259 BCAMP50895 628 aa18.1■□□□□ 0.49
SRPRA-206ENST00000532259 FGD1P98174 961 aa18.1■□□□□ 0.49
SRPRA-206ENST00000532259 CHRNDQ07001 517 aa18.1■□□□□ 0.49
SRPRA-206ENST00000532259 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
SRPRA-206ENST00000532259 LRRC4BQ9NT99 713 aa18.1■□□□□ 0.49
SRPRA-206ENST00000532259 IQSEC3Q9UPP2 1182 aaPredicted RBP18.1■□□□□ 0.49
SRPRA-206ENST00000532259 BCORQ6W2J9 1755 aa18.1■□□□□ 0.49
SRPRA-206ENST00000532259 IGHMBP2P38935 993 aaKnown RBP18.1■□□□□ 0.49
SRPRA-206ENST00000532259 SLC9C2Q5TAH2 1124 aa18.1■□□□□ 0.49
SRPRA-206ENST00000532259 CAVIN1Q6NZI2 390 aaKnown RBP18.1■□□□□ 0.49
SRPRA-206ENST00000532259 Q6ZUG5 572 aa18.1■□□□□ 0.49
SRPRA-206ENST00000532259 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
SRPRA-206ENST00000532259 HSP90B1P14625 803 aaKnown RBP18.09■□□□□ 0.49
SRPRA-206ENST00000532259 RASGRF1Q13972 1273 aa18.09■□□□□ 0.49
SRPRA-206ENST00000532259 SKOR2Q2VWA4 1001 aaPredicted RBP18.09■□□□□ 0.49
SRPRA-206ENST00000532259 SLC51AQ86UW1 340 aa18.09■□□□□ 0.49
SRPRA-206ENST00000532259 DSCC1Q9BVC3 393 aa18.09■□□□□ 0.49
SRPRA-206ENST00000532259 NARFQ9UHQ1 456 aa18.09■□□□□ 0.49
SRPRA-206ENST00000532259 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
SRPRA-206ENST00000532259 PPFIA3O75145 1194 aa18.09■□□□□ 0.49
SRPRA-206ENST00000532259 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
SRPRA-206ENST00000532259 RBM27Q9P2N5 1060 aaKnown RBP18.09■□□□□ 0.49
SRPRA-206ENST00000532259 NSFL1CQ9UNZ2 370 aaKnown RBP18.09■□□□□ 0.49
SRPRA-206ENST00000532259 STX6O43752 255 aa18.08■□□□□ 0.49
SRPRA-206ENST00000532259 CELF1Q92879 486 aaKnown RBP18.08■□□□□ 0.49
SRPRA-206ENST00000532259 ZSCAN31Q96LW9 406 aaPredicted RBP18.08■□□□□ 0.49
SRPRA-206ENST00000532259 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.49
SRPRA-206ENST00000532259 RTCBQ9Y3I0 505 aaKnown RBP18.08■□□□□ 0.49
SRPRA-206ENST00000532259 WDR33Q9C0J8 1336 aaKnown RBP18.08■□□□□ 0.48
SRPRA-206ENST00000532259 NHSQ6T4R5 1651 aa18.08■□□□□ 0.48
SRPRA-206ENST00000532259 VPS37CA5D8V6 355 aaPredicted RBP18.08■□□□□ 0.48
SRPRA-206ENST00000532259 ARID4AP29374 1257 aaPredicted RBP18.08■□□□□ 0.48
SRPRA-206ENST00000532259 KRT32Q14532 448 aa18.08■□□□□ 0.48
SRPRA-206ENST00000532259 GAS2L3Q86XJ1 694 aa18.08■□□□□ 0.48
SRPRA-206ENST00000532259 GPT2Q8TD30 523 aa18.08■□□□□ 0.48
SRPRA-206ENST00000532259 BRF1Q92994 677 aa18.08■□□□□ 0.48
SRPRA-206ENST00000532259 SH2B1Q9NRF2 756 aaPredicted RBP18.08■□□□□ 0.48
SRPRA-206ENST00000532259 TRPC5Q9UL62 973 aaPredicted RBP18.08■□□□□ 0.48
SRPRA-206ENST00000532259 GPAA1O43292 621 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 ZPR1O75312 459 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 SLC5A1P13866 664 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 RC3H1Q5TC82 1133 aaKnown RBP18.07■□□□□ 0.48
SRPRA-206ENST00000532259 APPBP2Q92624 585 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 ZNF831Q5JPB2 1677 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 TCHHQ07283 1943 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 E7EWF7 191 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 ONECUT3O60422 494 aaPredicted RBP18.07■□□□□ 0.48
SRPRA-206ENST00000532259 FGAP02671 866 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 KLHL40Q2TBA0 621 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 FAM196AQ6ZSG2 479 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 SETDB2Q96T68 719 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 PANK2Q9BZ23 570 aa18.07■□□□□ 0.48
SRPRA-206ENST00000532259 ADD2P35612 726 aa18.06■□□□□ 0.48
SRPRA-206ENST00000532259 NBPF5PQ86XG9 351 aaPredicted RBP18.06■□□□□ 0.48
SRPRA-206ENST00000532259 SPATA5Q8NB90 893 aa18.06■□□□□ 0.48
SRPRA-206ENST00000532259 IL27Q8NEV9 243 aa18.06■□□□□ 0.48
SRPRA-206ENST00000532259 ZNF512BQ96KM6 892 aaPredicted RBP18.06■□□□□ 0.48
SRPRA-206ENST00000532259 ATRNO75882 1429 aa18.06■□□□□ 0.48
SRPRA-206ENST00000532259 ZNF532Q9HCE3 1301 aa18.06■□□□□ 0.48
SRPRA-206ENST00000532259 PTMSP20962 102 aa18.06■□□□□ 0.48
SRPRA-206ENST00000532259 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms