RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 ZDHHC1Q8WTX9 485 aa8.55□□□□□ -1.04
ATM-216ENST00000531525 GMLQ99445 158 aa8.55□□□□□ -1.04
ATM-216ENST00000531525 TSPAN10Q9H1Z9 355 aaPredicted RBP8.55□□□□□ -1.04
ATM-216ENST00000531525 GPAMQ9HCL2 828 aa8.55□□□□□ -1.04
ATM-216ENST00000531525 CABP1Q9NZU7 370 aa8.55□□□□□ -1.04
ATM-216ENST00000531525 COL4A3BPQ9Y5P4 624 aa8.55□□□□□ -1.04
ATM-216ENST00000531525 NPATQ14207 1427 aa8.55□□□□□ -1.04
ATM-216ENST00000531525 CLTCQ00610 1675 aaKnown RBP8.55□□□□□ -1.04
ATM-216ENST00000531525 MSX1P28360 303 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 ITGAEP38570 1179 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 HSP90AB2PQ58FF8 381 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 TMC4Q7Z404 712 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 GMCL1Q96IK5 515 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 CHPF2Q9P2E5 772 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 PRPF40AO75400 957 aaKnown RBP8.54□□□□□ -1.04
ATM-216ENST00000531525 ATP4AP20648 1035 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 KRT76Q01546 638 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 PLCB3Q01970 1234 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 FILIP1Q7Z7B0 1213 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 RBCK1Q9BYM8 510 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 PARP3Q9Y6F1 533 aa8.54□□□□□ -1.04
ATM-216ENST00000531525 PLXNC1O60486 1568 aa8.53□□□□□ -1.04
ATM-216ENST00000531525 SAMD9LQ8IVG5 1584 aa8.53□□□□□ -1.04
ATM-216ENST00000531525 CEP170BQ9Y4F5 1589 aaPredicted RBP8.53□□□□□ -1.04
ATM-216ENST00000531525 H7C1W4 665 aa8.53□□□□□ -1.04
ATM-216ENST00000531525 TREHO43280 583 aa8.53□□□□□ -1.04
ATM-216ENST00000531525 POLR1AO95602 1720 aaPredicted RBP8.53□□□□□ -1.04
ATM-216ENST00000531525 HSD3B2P26439 372 aa8.53□□□□□ -1.04
ATM-216ENST00000531525 FMR1Q06787 632 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATM-216ENST00000531525 PLA2R1Q13018 1463 aa8.53□□□□□ -1.04
ATM-216ENST00000531525 TEAD4Q15561 434 aa8.53□□□□□ -1.04
ATM-216ENST00000531525 RUBCNLQ9H714 662 aa8.53□□□□□ -1.04
ATM-216ENST00000531525 WWC3Q9ULE0 1092 aa8.53□□□□□ -1.04
ATM-216ENST00000531525 INO80Q9ULG1 1556 aaPredicted RBP8.52□□□□□ -1.05
ATM-216ENST00000531525 CCDC18Q5T9S5 1454 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 NDUFB5O43674 189 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 NOS2P35228 1153 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 DAB2P98082 770 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 FGD1P98174 961 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 SH3PXD2AQ5TCZ1 1133 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 POTEAQ6S8J7 498 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 L3MBTL2Q969R5 705 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 AIDAQ96BJ3 306 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 MRFAP1L1Q96HT8 127 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 NUCKS1Q9H1E3 243 aaKnown RBP8.52□□□□□ -1.05
ATM-216ENST00000531525 CRISPLD1Q9H336 500 aa8.52□□□□□ -1.05
ATM-216ENST00000531525 G3BP2Q9UN86 482 aaKnown RBP8.52□□□□□ -1.05
ATM-216ENST00000531525 MED1Q15648 1581 aaPredicted RBP8.51□□□□□ -1.05
ATM-216ENST00000531525 SYCP2Q9BX26 1530 aa8.51□□□□□ -1.05
ATM-216ENST00000531525 TCOF1Q13428 1488 aaKnown RBP8.51□□□□□ -1.05
ATM-216ENST00000531525 UBAP2LQ14157 1087 aaKnown RBP8.51□□□□□ -1.05
ATM-216ENST00000531525 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
ATM-216ENST00000531525 GAS2L2Q8NHY3 880 aa8.51□□□□□ -1.05
ATM-216ENST00000531525 COL25A1Q9BXS0 654 aaPredicted RBP8.51□□□□□ -1.05
ATM-216ENST00000531525 IFT57Q9NWB7 429 aa8.51□□□□□ -1.05
ATM-216ENST00000531525 ZDHHC3Q9NYG2 299 aa8.51□□□□□ -1.05
ATM-216ENST00000531525 EML1O00423 815 aa8.5□□□□□ -1.05
ATM-216ENST00000531525 FAM13AO94988 1023 aa8.5□□□□□ -1.05
ATM-216ENST00000531525 TXLNAP40222 546 aa8.5□□□□□ -1.05
ATM-216ENST00000531525 PSMA6P60900 246 aaKnown RBP8.5□□□□□ -1.05
ATM-216ENST00000531525 NBPF1Q3BBV0 1214 aa8.5□□□□□ -1.05
ATM-216ENST00000531525 ZNF394Q53GI3 561 aa8.5□□□□□ -1.05
ATM-216ENST00000531525 VPS37DQ86XT2 251 aa8.5□□□□□ -1.05
ATM-216ENST00000531525 GTPBP3Q969Y2 492 aaKnown RBP8.5□□□□□ -1.05
ATM-216ENST00000531525 FAN1Q9Y2M0 1017 aa8.5□□□□□ -1.05
ATM-216ENST00000531525 PCDHGB7Q9Y5F8 929 aa8.5□□□□□ -1.05
ATM-216ENST00000531525 ATP7AQ04656 1500 aa8.5□□□□□ -1.05
ATM-216ENST00000531525 ATAD2Q6PL18 1390 aa8.5□□□□□ -1.05
ATM-216ENST00000531525 GPR25O00155 361 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 PTCD1O75127 700 aaKnown RBP8.49□□□□□ -1.05
ATM-216ENST00000531525 ATP2B2Q01814 1243 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 EHHADHQ08426 723 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 FKBP5Q13451 457 aaPredicted RBP8.49□□□□□ -1.05
ATM-216ENST00000531525 AAMPQ13685 434 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 GAS6Q14393 721 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 SETDB2Q96T68 719 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 BRINP2Q9C0B6 783 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 PCDH12Q9NPG4 1184 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 GABBR1Q9UBS5 961 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 ADGBQ8N7X0 1667 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 ZNF335Q9H4Z2 1342 aaPredicted RBP8.49□□□□□ -1.05
ATM-216ENST00000531525 CCDC194A0A1B0GVG4 234 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 SERTM1A2A2V5 107 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
ATM-216ENST00000531525 LBRQ14739 615 aaKnown RBP8.49□□□□□ -1.05
ATM-216ENST00000531525 PGBD3Q8N328 593 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 HELQQ8TDG4 1101 aa8.49□□□□□ -1.05
ATM-216ENST00000531525 SCG3Q8WXD2 468 aaKnown RBP8.49□□□□□ -1.05
ATM-216ENST00000531525 MAGEC2Q9UBF1 373 aaPredicted RBP8.49□□□□□ -1.05
ATM-216ENST00000531525 HIRAP54198 1017 aaPredicted RBP8.48□□□□□ -1.05
ATM-216ENST00000531525 NFE2L2Q16236 605 aa8.48□□□□□ -1.05
ATM-216ENST00000531525 MCF2L2Q86YR7 1114 aa8.48□□□□□ -1.05
ATM-216ENST00000531525 C7orf43Q8WVR3 580 aa8.48□□□□□ -1.05
ATM-216ENST00000531525 CNTNAP3BQ96NU0 1288 aa8.48□□□□□ -1.05
ATM-216ENST00000531525 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.48□□□□□ -1.054e-9■□□□□ 10
ATM-216ENST00000531525 CNTNAP3Q9BZ76 1288 aa8.48□□□□□ -1.05
ATM-216ENST00000531525 ZNF232Q9UNY5 417 aa8.48□□□□□ -1.05
ATM-216ENST00000531525 CASKIN1Q8WXD9 1431 aa8.48□□□□□ -1.05
ATM-216ENST00000531525 NEURL4Q96JN8 1562 aa8.47□□□□□ -1.05
ATM-216ENST00000531525 ZMYM3Q14202 1370 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms