RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 RBM8AQ9Y5S9 174 aaKnown RBP13.15□□□□□ -0.3
SRPRA-205ENST00000531104 CHGBP05060 677 aa13.14□□□□□ -0.31
SRPRA-205ENST00000531104 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
SRPRA-205ENST00000531104 GTF2E1P29083 439 aaPredicted RBP13.14□□□□□ -0.31
SRPRA-205ENST00000531104 PHKA1P46020 1223 aa13.14□□□□□ -0.31
SRPRA-205ENST00000531104 POTEAQ6S8J7 498 aa13.14□□□□□ -0.31
SRPRA-205ENST00000531104 FBXO41Q8TF61 875 aa13.14□□□□□ -0.31
SRPRA-205ENST00000531104 CELF1Q92879 486 aaKnown RBP13.14□□□□□ -0.31
SRPRA-205ENST00000531104 RPAP1Q9BWH6 1393 aaPredicted RBP13.13□□□□□ -0.31
SRPRA-205ENST00000531104 APBA3O96018 575 aa13.13□□□□□ -0.31
SRPRA-205ENST00000531104 NEK4P51957 841 aa13.13□□□□□ -0.31
SRPRA-205ENST00000531104 RPS8P62241 208 aaKnown RBP13.13□□□□□ -0.31
SRPRA-205ENST00000531104 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRPRA-205ENST00000531104 UBE4AQ14139 1066 aa13.13□□□□□ -0.31
SRPRA-205ENST00000531104 ZNF827Q17R98 1081 aa13.13□□□□□ -0.31
SRPRA-205ENST00000531104 LRRFIP1Q32MZ4 808 aaKnown RBP13.13□□□□□ -0.31
SRPRA-205ENST00000531104 CREB3L3Q68CJ9 461 aa13.13□□□□□ -0.31
SRPRA-205ENST00000531104 TTC14Q96N46 770 aa13.13□□□□□ -0.31
SRPRA-205ENST00000531104 SEC62Q99442 399 aaKnown RBP13.13□□□□□ -0.31
SRPRA-205ENST00000531104 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
SRPRA-205ENST00000531104 MINPP1Q9UNW1 487 aa13.13□□□□□ -0.31
SRPRA-205ENST00000531104 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
SRPRA-205ENST00000531104 TAF1P21675 1872 aa13.12□□□□□ -0.31
SRPRA-205ENST00000531104 DOCK2Q92608 1830 aa13.12□□□□□ -0.31
SRPRA-205ENST00000531104 SLC27A2O14975 620 aa13.12□□□□□ -0.31
SRPRA-205ENST00000531104 CYP2E1P05181 493 aaPredicted RBP13.12□□□□□ -0.31
SRPRA-205ENST00000531104 TTF1Q15361 905 aaPredicted RBP13.12□□□□□ -0.31
SRPRA-205ENST00000531104 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
SRPRA-205ENST00000531104 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
SRPRA-205ENST00000531104 DSCC1Q9BVC3 393 aa13.12□□□□□ -0.31
SRPRA-205ENST00000531104 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
SRPRA-205ENST00000531104 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
SRPRA-205ENST00000531104 CHMP5Q9NZZ3 219 aa13.12□□□□□ -0.31
SRPRA-205ENST00000531104 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
SRPRA-205ENST00000531104 NRXN2Q9P2S2 1712 aa13.12□□□□□ -0.31
SRPRA-205ENST00000531104 MAST3O60307 1309 aa13.12□□□□□ -0.31
SRPRA-205ENST00000531104 MYH7P12883 1935 aa13.11□□□□□ -0.31
SRPRA-205ENST00000531104 SNAP23O00161 211 aa13.11□□□□□ -0.31
SRPRA-205ENST00000531104 CUL4AQ13619 759 aa13.11□□□□□ -0.31
SRPRA-205ENST00000531104 SLFNL1Q499Z3 407 aa13.11□□□□□ -0.31
SRPRA-205ENST00000531104 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
SRPRA-205ENST00000531104 PI16Q6UXB8 463 aa13.11□□□□□ -0.31
SRPRA-205ENST00000531104 CCDC129Q6ZRS4 1044 aa13.11□□□□□ -0.31
SRPRA-205ENST00000531104 CNBD1Q8NA66 436 aa13.11□□□□□ -0.31
SRPRA-205ENST00000531104 OSBP2Q969R2 916 aa13.11□□□□□ -0.31
SRPRA-205ENST00000531104 PIH1D3Q9NQM4 214 aaKnown RBP13.11□□□□□ -0.31
SRPRA-205ENST00000531104 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
SRPRA-205ENST00000531104 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
SRPRA-205ENST00000531104 M0R2C6 588 aa13.1□□□□□ -0.31
SRPRA-205ENST00000531104 POLRMTO00411 1230 aaKnown RBP13.1□□□□□ -0.31
SRPRA-205ENST00000531104 SERPINB2P05120 415 aa13.1□□□□□ -0.31
SRPRA-205ENST00000531104 ADD2P35612 726 aa13.1□□□□□ -0.31
SRPRA-205ENST00000531104 DDR1Q08345 913 aa13.1□□□□□ -0.31
SRPRA-205ENST00000531104 ADCK5Q3MIX3 580 aa13.1□□□□□ -0.31
SRPRA-205ENST00000531104 SPATA5Q8NB90 893 aa13.1□□□□□ -0.31
SRPRA-205ENST00000531104 APPBP2Q92624 585 aa13.1□□□□□ -0.31
SRPRA-205ENST00000531104 ALDH8A1Q9H2A2 487 aaPredicted RBP13.1□□□□□ -0.31
SRPRA-205ENST00000531104 IRS2Q9Y4H2 1338 aa13.1□□□□□ -0.31
SRPRA-205ENST00000531104 TCRBV5S4A2TA0A5A2 114 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 ZKSCAN1P17029 563 aaPredicted RBP13.09□□□□□ -0.31
SRPRA-205ENST00000531104 BCAMP50895 628 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 GRAPQ13588 217 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 RASGRF1Q13972 1273 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 RNF20Q5VTR2 975 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 ZSCAN25Q6NSZ9 544 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 COL23A1Q86Y22 540 aaPredicted RBP13.09□□□□□ -0.31
SRPRA-205ENST00000531104 CCDC24Q8N4L8 307 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 SPRYD3Q8NCJ5 442 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 FLAD1Q8NFF5 587 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 GRAPLQ8TC17 118 aaPredicted RBP13.09□□□□□ -0.31
SRPRA-205ENST00000531104 TMX3Q96JJ7 454 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 UPF3BQ9BZI7 483 aaKnown RBP13.09□□□□□ -0.31
SRPRA-205ENST00000531104 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.314e-11■■□□□ 13.6
SRPRA-205ENST00000531104 ANKRD2Q9GZV1 360 aa13.09□□□□□ -0.31
SRPRA-205ENST00000531104 FOXP2O15409 715 aa13.08□□□□□ -0.32
SRPRA-205ENST00000531104 HSPD1P10809 573 aaKnown RBP13.08□□□□□ -0.32
SRPRA-205ENST00000531104 HOXA10P31260 410 aaPredicted RBP13.08□□□□□ -0.32
SRPRA-205ENST00000531104 NFKBIBQ15653 356 aa13.08□□□□□ -0.32
SRPRA-205ENST00000531104 VPS53Q5VIR6 699 aa13.08□□□□□ -0.32
SRPRA-205ENST00000531104 FBXO33Q7Z6M2 555 aa13.08□□□□□ -0.32
SRPRA-205ENST00000531104 CWC22Q9HCG8 908 aaKnown RBP13.08□□□□□ -0.32
SRPRA-205ENST00000531104 PDS5AQ29RF7 1337 aaKnown RBP13.08□□□□□ -0.32
SRPRA-205ENST00000531104 QSER1Q2KHR3 1735 aa13.08□□□□□ -0.32
SRPRA-205ENST00000531104 WTIPA6NIX2 430 aaPredicted RBP13.07□□□□□ -0.32
SRPRA-205ENST00000531104 CASTP20810 708 aaKnown RBP13.07□□□□□ -0.32
SRPRA-205ENST00000531104 PSMA5P28066 241 aa13.07□□□□□ -0.32
SRPRA-205ENST00000531104 KCNJ4P48050 445 aa13.07□□□□□ -0.32
SRPRA-205ENST00000531104 ST5P78524 1137 aa13.07□□□□□ -0.32
SRPRA-205ENST00000531104 KRT32Q14532 448 aa13.07□□□□□ -0.32
SRPRA-205ENST00000531104 RUFY3Q7L099 469 aa13.07□□□□□ -0.32
SRPRA-205ENST00000531104 NLGN1Q8N2Q7 840 aa13.07□□□□□ -0.32
SRPRA-205ENST00000531104 INTS4Q96HW7 963 aaKnown RBP13.07□□□□□ -0.32
SRPRA-205ENST00000531104 FAM84BQ96KN1 310 aaPredicted RBP13.07□□□□□ -0.32
SRPRA-205ENST00000531104 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
SRPRA-205ENST00000531104 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
SRPRA-205ENST00000531104 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
SRPRA-205ENST00000531104 MYO5AQ9Y4I1 1855 aaKnown RBP13.07□□□□□ -0.32
SRPRA-205ENST00000531104 COL1A1P02452 1464 aaPredicted RBP13.06□□□□□ -0.32
SRPRA-205ENST00000531104 SEMA3EO15041 775 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms