RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 RABL6Q3YEC7 729 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-221ENST00000531068 HELBQ8NG08 1087 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-221ENST00000531068 GMLQ99445 158 aa13.79□□□□□ -0.2
CAPN1-221ENST00000531068 USP44Q9H0E7 712 aa13.79□□□□□ -0.2
CAPN1-221ENST00000531068 MYO3BQ8WXR4 1341 aa13.79□□□□□ -0.2
CAPN1-221ENST00000531068 CNTNAP1P78357 1384 aa13.79□□□□□ -0.2
CAPN1-221ENST00000531068 RASSF10A6NK89 507 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 TRAF5O00463 557 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 IPO8O15397 1037 aaKnown RBP13.78□□□□□ -0.2
CAPN1-221ENST00000531068 PLIN1O60240 522 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 TAF5LO75529 589 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 RARSP54136 660 aaKnown RBP13.78□□□□□ -0.2
CAPN1-221ENST00000531068 KIF4BQ2VIQ3 1234 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 CST9Q5W186 159 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 TTLL5Q6EMB2 1281 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 TXNRD3Q86VQ6 643 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 KAZALD1Q96I82 304 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 ZNF594Q96JF6 807 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-221ENST00000531068 GLIS2Q9BZE0 524 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-221ENST00000531068 BICC1Q9H694 974 aaKnown RBP13.78□□□□□ -0.2
CAPN1-221ENST00000531068 LAMB2P55268 1798 aa13.78□□□□□ -0.2
CAPN1-221ENST00000531068 LRRC37AA6NMS7 1700 aa13.77□□□□□ -0.21
CAPN1-221ENST00000531068 CELF2O95319 508 aaKnown RBP13.77□□□□□ -0.21
CAPN1-221ENST00000531068 COL4A1P02462 1669 aa13.77□□□□□ -0.21
CAPN1-221ENST00000531068 ECE1P42892 770 aa13.77□□□□□ -0.21
CAPN1-221ENST00000531068 UBE4AQ14139 1066 aa13.77□□□□□ -0.21
CAPN1-221ENST00000531068 DACT2Q5SW24 774 aa13.77□□□□□ -0.21
CAPN1-221ENST00000531068 KRT26Q7Z3Y9 468 aa13.77□□□□□ -0.21
CAPN1-221ENST00000531068 ZNF804AQ7Z570 1209 aa13.77□□□□□ -0.21
CAPN1-221ENST00000531068 USP48Q86UV5 1035 aa13.77□□□□□ -0.21
CAPN1-221ENST00000531068 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
CAPN1-221ENST00000531068 MROH5Q6ZUA9 1318 aa13.76□□□□□ -0.21
CAPN1-221ENST00000531068 KIF16BQ96L93 1317 aa13.76□□□□□ -0.21
CAPN1-221ENST00000531068 VEGFBP49765 207 aa13.76□□□□□ -0.21
CAPN1-221ENST00000531068 SCARF1Q14162 830 aa13.76□□□□□ -0.21
CAPN1-221ENST00000531068 SULF1Q8IWU6 871 aa13.76□□□□□ -0.21
CAPN1-221ENST00000531068 MYOZ2Q9NPC6 264 aa13.76□□□□□ -0.21
CAPN1-221ENST00000531068 ZNF609O15014 1411 aa13.75□□□□□ -0.21
CAPN1-221ENST00000531068 SNAP23O00161 211 aa13.75□□□□□ -0.21
CAPN1-221ENST00000531068 EGFRP00533 1210 aa13.75□□□□□ -0.21
CAPN1-221ENST00000531068 UBTFL1P0CB47 393 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-221ENST00000531068 KLRK1P26718 216 aa13.75□□□□□ -0.21
CAPN1-221ENST00000531068 GTF2IP78347 998 aa13.75□□□□□ -0.21
CAPN1-221ENST00000531068 FMR1Q06787 632 aaKnown RBP eCLIP13.75□□□□□ -0.21
CAPN1-221ENST00000531068 ANKRD44Q8N8A2 993 aa13.75□□□□□ -0.21
CAPN1-221ENST00000531068 HDAC9Q9UKV0 1011 aa13.75□□□□□ -0.21
CAPN1-221ENST00000531068 RIPOR2Q9Y4F9 1068 aa13.75□□□□□ -0.21
CAPN1-221ENST00000531068 TLL2Q9Y6L7 1015 aa13.75□□□□□ -0.21
CAPN1-221ENST00000531068 NEFLP07196 543 aa13.74□□□□□ -0.21
CAPN1-221ENST00000531068 IL1R1P14778 569 aa13.74□□□□□ -0.21
CAPN1-221ENST00000531068 SAPCD2Q86UD0 394 aa13.74□□□□□ -0.21
CAPN1-221ENST00000531068 HHIPL1Q96JK4 782 aa13.74□□□□□ -0.21
CAPN1-221ENST00000531068 PUS3Q9BZE2 481 aaKnown RBP13.74□□□□□ -0.21
CAPN1-221ENST00000531068 ZNF408Q9H9D4 720 aa13.74□□□□□ -0.21
CAPN1-221ENST00000531068 WDR33Q9C0J8 1336 aaKnown RBP13.73□□□□□ -0.21
CAPN1-221ENST00000531068 IRS2Q9Y4H2 1338 aa13.73□□□□□ -0.21
CAPN1-221ENST00000531068 SASH1O94885 1247 aa13.73□□□□□ -0.21
CAPN1-221ENST00000531068 HSPA1AP0DMV8 641 aaKnown RBP13.73□□□□□ -0.21
CAPN1-221ENST00000531068 HSPA1BP0DMV9 641 aaKnown RBP13.73□□□□□ -0.21
CAPN1-221ENST00000531068 MAP2K1Q02750 393 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-221ENST00000531068 METTL24Q5JXM2 366 aa13.73□□□□□ -0.21
CAPN1-221ENST00000531068 ANGEL2Q5VTE6 544 aaKnown RBP13.73□□□□□ -0.21
CAPN1-221ENST00000531068 PAXIP1Q6ZW49 1069 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-221ENST00000531068 C2orf69Q8N8R5 385 aa13.73□□□□□ -0.21
CAPN1-221ENST00000531068 GGA3Q9NZ52 723 aa13.73□□□□□ -0.21
CAPN1-221ENST00000531068 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
CAPN1-221ENST00000531068 TAF1P21675 1872 aa13.72□□□□□ -0.21
CAPN1-221ENST00000531068 PDE8BO95263 885 aa13.72□□□□□ -0.21
CAPN1-221ENST00000531068 HIBADHP31937 336 aaKnown RBP13.72□□□□□ -0.21
CAPN1-221ENST00000531068 FKBP1AP62942 108 aaKnown RBP13.72□□□□□ -0.21
CAPN1-221ENST00000531068 CAVIN4Q5BKX8 364 aa13.72□□□□□ -0.21
CAPN1-221ENST00000531068 INTS3Q68E01 1043 aaKnown RBP13.72□□□□□ -0.21
CAPN1-221ENST00000531068 AIDAQ96BJ3 306 aa13.72□□□□□ -0.21
CAPN1-221ENST00000531068 CAPNS2Q96L46 248 aa13.72□□□□□ -0.21
CAPN1-221ENST00000531068 MXD3Q9BW11 206 aa13.72□□□□□ -0.21
CAPN1-221ENST00000531068 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
CAPN1-221ENST00000531068 RCAN3Q9UKA8 241 aa13.72□□□□□ -0.21
CAPN1-221ENST00000531068 ADAMTSL1Q8N6G6 1762 aa13.72□□□□□ -0.21
CAPN1-221ENST00000531068 PITPNM2Q9BZ72 1349 aa13.71□□□□□ -0.21
CAPN1-221ENST00000531068 GNAI3P08754 354 aa13.71□□□□□ -0.21
CAPN1-221ENST00000531068 LRRC24Q50LG9 513 aa13.71□□□□□ -0.21
CAPN1-221ENST00000531068 VPS37DQ86XT2 251 aa13.71□□□□□ -0.21
CAPN1-221ENST00000531068 KIAA0825Q8IV33 1275 aa13.71□□□□□ -0.21
CAPN1-221ENST00000531068 FRAT1Q92837 279 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-221ENST00000531068 FAM84BQ96KN1 310 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-221ENST00000531068 CACNA1FO60840 1977 aa13.71□□□□□ -0.22
CAPN1-221ENST00000531068 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
CAPN1-221ENST00000531068 EYA2O00167 538 aa13.7□□□□□ -0.22
CAPN1-221ENST00000531068 WNT10BO00744 389 aa13.7□□□□□ -0.22
CAPN1-221ENST00000531068 IFIT1P09914 478 aaKnown RBP13.7□□□□□ -0.22
CAPN1-221ENST00000531068 MAP2K2P36507 400 aa13.7□□□□□ -0.22
CAPN1-221ENST00000531068 DLGAP5Q15398 846 aa13.7□□□□□ -0.22
CAPN1-221ENST00000531068 ATF7IPQ6VMQ6 1270 aa13.7□□□□□ -0.22
CAPN1-221ENST00000531068 TDRD7Q8NHU6 1098 aaKnown RBP13.7□□□□□ -0.22
CAPN1-221ENST00000531068 GBA2Q9HCG7 927 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-221ENST00000531068 WBP1LQ9NX94 342 aa13.7□□□□□ -0.22
CAPN1-221ENST00000531068 FAM205AQ6ZU69 1335 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 BCAR3O75815 825 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms