RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 TRPM4Q8TD43 1214 aa23.45■■□□□ 1.34
GMDS-208ENST00000530927 CNOT7Q9UIV1 285 aaKnown RBP23.45■■□□□ 1.34
GMDS-208ENST00000530927 EGFRP00533 1210 aa23.44■■□□□ 1.34
GMDS-208ENST00000530927 PTPN12Q05209 780 aaKnown RBP23.44■■□□□ 1.34
GMDS-208ENST00000530927 MAP1SQ66K74 1059 aaPredicted RBP23.44■■□□□ 1.34
GMDS-208ENST00000530927 MICALL2Q8IY33 904 aa23.44■■□□□ 1.34
GMDS-208ENST00000530927 VIL1P09327 827 aaKnown RBP23.43■■□□□ 1.34
GMDS-208ENST00000530927 DZIP1LQ8IYY4 767 aaKnown RBP23.43■■□□□ 1.34
GMDS-208ENST00000530927 PANK1Q8TE04 598 aa23.43■■□□□ 1.34
GMDS-208ENST00000530927 FBXW7Q969H0 707 aa23.43■■□□□ 1.34
GMDS-208ENST00000530927 SIL1Q9H173 461 aa23.43■■□□□ 1.34
GMDS-208ENST00000530927 PA2G4Q9UQ80 394 aaKnown RBP23.43■■□□□ 1.34
GMDS-208ENST00000530927 HIRAP54198 1017 aaPredicted RBP23.42■■□□□ 1.34
GMDS-208ENST00000530927 SAMD7Q7Z3H4 446 aa23.42■■□□□ 1.34
GMDS-208ENST00000530927 PNMA8AQ86V59 439 aaPredicted RBP23.42■■□□□ 1.34
GMDS-208ENST00000530927 FTSJ3Q8IY81 847 aaKnown RBP23.42■■□□□ 1.34
GMDS-208ENST00000530927 ADARB2Q9NS39 739 aaKnown RBP23.42■■□□□ 1.34
GMDS-208ENST00000530927 GNAI3P08754 354 aa23.42■■□□□ 1.34
GMDS-208ENST00000530927 METTL24Q5JXM2 366 aa23.42■■□□□ 1.34
GMDS-208ENST00000530927 PODNQ7Z5L7 613 aa23.42■■□□□ 1.34
GMDS-208ENST00000530927 VGLL2Q8N8G2 317 aa23.42■■□□□ 1.34
GMDS-208ENST00000530927 COA1Q9GZY4 146 aa23.42■■□□□ 1.34
GMDS-208ENST00000530927 RCAN3Q9UKA8 241 aa23.42■■□□□ 1.34
GMDS-208ENST00000530927 USP17L3A6NCW0 530 aa23.41■■□□□ 1.34
GMDS-208ENST00000530927 USP17L4A6NCW7 530 aa23.41■■□□□ 1.34
GMDS-208ENST00000530927 FMR1Q06787 632 aaKnown RBP eCLIP23.41■■□□□ 1.343e-12■■■■■ 43.2
GMDS-208ENST00000530927 RSBN1LQ6PCB5 846 aaPredicted RBP23.41■■□□□ 1.34
GMDS-208ENST00000530927 USP17L1Q7RTZ2 530 aa23.41■■□□□ 1.34
GMDS-208ENST00000530927 ITPRIPQ8IWB1 547 aa23.41■■□□□ 1.34
GMDS-208ENST00000530927 C1orf115Q9H7X2 142 aa23.41■■□□□ 1.34
GMDS-208ENST00000530927 CD209Q9NNX6 404 aa23.41■■□□□ 1.34
GMDS-208ENST00000530927 JAG2Q9Y219 1238 aa23.41■■□□□ 1.34
GMDS-208ENST00000530927 MROH5Q6ZUA9 1318 aa23.4■■□□□ 1.34
GMDS-208ENST00000530927 TBC1D10BQ4KMP7 808 aaPredicted RBP23.4■■□□□ 1.34
GMDS-208ENST00000530927 RBM26Q5T8P6 1007 aaKnown RBP23.4■■□□□ 1.34
GMDS-208ENST00000530927 USP50Q70EL3 339 aaPredicted RBP23.4■■□□□ 1.34
GMDS-208ENST00000530927 ATG9AQ7Z3C6 839 aa23.4■■□□□ 1.34
GMDS-208ENST00000530927 DPF2Q92785 391 aa23.4■■□□□ 1.34
GMDS-208ENST00000530927 EYA2O00167 538 aa23.39■■□□□ 1.33
GMDS-208ENST00000530927 GYG1P46976 350 aa23.39■■□□□ 1.33
GMDS-208ENST00000530927 DACT2Q5SW24 774 aa23.39■■□□□ 1.33
GMDS-208ENST00000530927 C15orf52Q6ZUT6 534 aaKnown RBP23.39■■□□□ 1.33
GMDS-208ENST00000530927 ITGBL1O95965 494 aaPredicted RBP23.38■■□□□ 1.33
GMDS-208ENST00000530927 GTF2IP78347 998 aa23.38■■□□□ 1.33
GMDS-208ENST00000530927 GMLQ99445 158 aa23.38■■□□□ 1.33
GMDS-208ENST00000530927 H7C1D1 291 aa23.37■■□□□ 1.33
GMDS-208ENST00000530927 SRGAP3O43295 1099 aa23.37■■□□□ 1.33
GMDS-208ENST00000530927 GNAI2P04899 355 aa23.37■■□□□ 1.33
GMDS-208ENST00000530927 RPS12P25398 132 aaKnown RBP23.37■■□□□ 1.33
GMDS-208ENST00000530927 UBE4AQ14139 1066 aa23.37■■□□□ 1.33
GMDS-208ENST00000530927 CNTROBQ8N137 903 aa23.37■■□□□ 1.33
GMDS-208ENST00000530927 PNMA6EA0A0J9YXQ4 647 aa23.36■■□□□ 1.33
GMDS-208ENST00000530927 PDE8BO95263 885 aa23.36■■□□□ 1.33
GMDS-208ENST00000530927 APLP1P51693 650 aa23.36■■□□□ 1.33
GMDS-208ENST00000530927 FAM84BQ96KN1 310 aaPredicted RBP23.36■■□□□ 1.33
GMDS-208ENST00000530927 ASTN2O75129 1339 aaPredicted RBP23.36■■□□□ 1.33
GMDS-208ENST00000530927 PASKQ96RG2 1323 aa23.36■■□□□ 1.33
GMDS-208ENST00000530927 ZBTB7BO15156 539 aaPredicted RBP23.35■■□□□ 1.33
GMDS-208ENST00000530927 TTLL5Q6EMB2 1281 aa23.35■■□□□ 1.33
GMDS-208ENST00000530927 DLK2Q6UY11 383 aa23.35■■□□□ 1.33
GMDS-208ENST00000530927 ZNF804AQ7Z570 1209 aa23.35■■□□□ 1.33
GMDS-208ENST00000530927 ZNF609O15014 1411 aa23.34■■□□□ 1.33
GMDS-208ENST00000530927 TRAF5O00463 557 aa23.34■■□□□ 1.33
GMDS-208ENST00000530927 STRIP1Q5VSL9 837 aa23.34■■□□□ 1.33
GMDS-208ENST00000530927 IQSEC3Q9UPP2 1182 aaPredicted RBP23.34■■□□□ 1.33
GMDS-208ENST00000530927 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.34■■□□□ 1.33
GMDS-208ENST00000530927 IL1R1P14778 569 aa23.33■■□□□ 1.33
GMDS-208ENST00000530927 MTX1Q13505 466 aa23.33■■□□□ 1.33
GMDS-208ENST00000530927 C20orf194Q5TEA3 1177 aa23.33■■□□□ 1.33
GMDS-208ENST00000530927 CERS5Q8N5B7 392 aa23.33■■□□□ 1.33
GMDS-208ENST00000530927 AGBL3Q8NEM8 1001 aa23.33■■□□□ 1.33
GMDS-208ENST00000530927 HDAC5Q9UQL6 1122 aa23.33■■□□□ 1.33
GMDS-208ENST00000530927 FGFR2P21802 821 aa23.33■■□□□ 1.32
GMDS-208ENST00000530927 ZNF280AP59817 542 aaPredicted RBP23.33■■□□□ 1.32
GMDS-208ENST00000530927 KIF4BQ2VIQ3 1234 aa23.33■■□□□ 1.32
GMDS-208ENST00000530927 COPRSQ9NQ92 184 aa23.33■■□□□ 1.32
GMDS-208ENST00000530927 CIAO1O76071 339 aa23.32■■□□□ 1.32
GMDS-208ENST00000530927 USP17L8P0C7I0 530 aa23.32■■□□□ 1.32
GMDS-208ENST00000530927 HIBADHP31937 336 aaKnown RBP23.32■■□□□ 1.32
GMDS-208ENST00000530927 GLIS2Q9BZE0 524 aaPredicted RBP23.32■■□□□ 1.32
GMDS-208ENST00000530927 BCAMP50895 628 aa23.31■■□□□ 1.32
GMDS-208ENST00000530927 PUM3Q15397 648 aaKnown RBP23.31■■□□□ 1.32
GMDS-208ENST00000530927 KIAA0825Q8IV33 1275 aa23.31■■□□□ 1.32
GMDS-208ENST00000530927 COG6Q9Y2V7 657 aa23.31■■□□□ 1.32
GMDS-208ENST00000530927 FBXO33Q7Z6M2 555 aa23.3■■□□□ 1.32
GMDS-208ENST00000530927 DNAJC5GQ8N7S2 189 aa23.3■■□□□ 1.32
GMDS-208ENST00000530927 TDRD7Q8NHU6 1098 aaKnown RBP23.3■■□□□ 1.32
GMDS-208ENST00000530927 MYOZ2Q9NPC6 264 aa23.3■■□□□ 1.32
GMDS-208ENST00000530927 PGAP2Q9UHJ9 254 aa23.3■■□□□ 1.32
GMDS-208ENST00000530927 SCAF8Q9UPN6 1271 aaKnown RBP23.3■■□□□ 1.32
GMDS-208ENST00000530927 F8W031 263 aaPredicted RBP23.29■■□□□ 1.32
GMDS-208ENST00000530927 IL15P40933 162 aaPredicted RBP23.28■■□□□ 1.32
GMDS-208ENST00000530927 CEP126Q9P2H0 1117 aa23.28■■□□□ 1.32
GMDS-208ENST00000530927 PCDHAC2Q9Y5I4 1007 aa23.28■■□□□ 1.32
GMDS-208ENST00000530927 TFCP2Q12800 502 aa23.27■■□□□ 1.32
GMDS-208ENST00000530927 ATP2B3Q16720 1220 aa23.27■■□□□ 1.32
GMDS-208ENST00000530927 USP48Q86UV5 1035 aa23.27■■□□□ 1.32
GMDS-208ENST00000530927 VPS37DQ86XT2 251 aa23.27■■□□□ 1.32
GMDS-208ENST00000530927 GGA3Q9NZ52 723 aa23.27■■□□□ 1.32
GMDS-208ENST00000530927 POLR2AP24928 1970 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms