RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 IL17REQ8NFR9 667 aa6.9□□□□□ -1.3
PCF11-205ENST00000530906 OCSTAMPQ9BR26 566 aa6.9□□□□□ -1.3
PCF11-205ENST00000530906 ARHGAP9Q9BRR9 750 aa6.9□□□□□ -1.3
PCF11-205ENST00000530906 FKBPLQ9UIM3 349 aa6.9□□□□□ -1.3
PCF11-205ENST00000530906 CPDO75976 1380 aa6.9□□□□□ -1.31
PCF11-205ENST00000530906 TMEM94Q12767 1356 aa6.9□□□□□ -1.31
PCF11-205ENST00000530906 TNS3Q68CZ2 1445 aa6.9□□□□□ -1.31
PCF11-205ENST00000530906 SIPA1L3O60292 1781 aaPredicted RBP6.9□□□□□ -1.31
PCF11-205ENST00000530906 SPINT1O43278 529 aa6.89□□□□□ -1.31
PCF11-205ENST00000530906 FOXO3O43524 673 aa6.89□□□□□ -1.31
PCF11-205ENST00000530906 RBM25P49756 843 aaKnown RBP6.89□□□□□ -1.31
PCF11-205ENST00000530906 PTSQ03393 145 aa6.89□□□□□ -1.31
PCF11-205ENST00000530906 TEFQ10587 303 aa6.89□□□□□ -1.31
PCF11-205ENST00000530906 FLIIQ13045 1269 aa6.89□□□□□ -1.31
PCF11-205ENST00000530906 C1orf141Q5JVX7 400 aa6.89□□□□□ -1.31
PCF11-205ENST00000530906 ANKRD45Q5TZF3 282 aa6.89□□□□□ -1.31
PCF11-205ENST00000530906 NUTM2GQ5VZR2 741 aa6.89□□□□□ -1.31
PCF11-205ENST00000530906 CEP85Q6P2H3 762 aa6.89□□□□□ -1.31
PCF11-205ENST00000530906 KCTD15Q96SI1 283 aaPredicted RBP6.89□□□□□ -1.31
PCF11-205ENST00000530906 CRYBG1Q9Y4K1 1723 aa6.89□□□□□ -1.31
PCF11-205ENST00000530906 STRCP1A6NGW2 1772 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 PARP4Q9UKK3 1724 aaKnown RBP6.88□□□□□ -1.31
PCF11-205ENST00000530906 GNAI2P04899 355 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 GSK3AP49840 483 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 SKIV2LQ15477 1246 aaKnown RBP6.88□□□□□ -1.31
PCF11-205ENST00000530906 NBPF6Q5VWK0 638 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 ZNF530Q6P9A1 599 aaPredicted RBP6.88□□□□□ -1.31
PCF11-205ENST00000530906 SIRT2Q8IXJ6 389 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 PROCA1Q8NCQ7 364 aaPredicted RBP6.88□□□□□ -1.31
PCF11-205ENST00000530906 ANKRD24Q8TF21 1146 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 NBPF4Q96M43 638 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 ORAI2Q96SN7 254 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.88□□□□□ -1.31
PCF11-205ENST00000530906 C22orf23Q9BZE7 217 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 LNPKQ9C0E8 428 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 PGPEP1Q9NXJ5 209 aa6.88□□□□□ -1.31
PCF11-205ENST00000530906 CDV3Q9UKY7 258 aaKnown RBP6.88□□□□□ -1.31
PCF11-205ENST00000530906 RGPD2P0DJD1 1756 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 COL18A1P39060 1754 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 PKD1L3Q7Z443 1732 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 MRC1P22897 1456 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 PXDNQ92626 1479 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 HEG1Q9ULI3 1381 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 AOX1Q06278 1338 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 ZC3H4Q9UPT8 1303 aaKnown RBP6.87□□□□□ -1.31
PCF11-205ENST00000530906 FIGNL2A6NMB9 653 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 CDC45O75419 566 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 HSP90AB1P08238 724 aaKnown RBP6.87□□□□□ -1.31
PCF11-205ENST00000530906 EIF4A1P60842 406 aaKnown RBP6.87□□□□□ -1.31
PCF11-205ENST00000530906 FKBP5Q13451 457 aaPredicted RBP6.87□□□□□ -1.31
PCF11-205ENST00000530906 NR6A1Q15406 480 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 HDGFL1Q5TGJ6 251 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 PPP2R2DQ66LE6 453 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 CASC1Q6TDU7 716 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 SLC10A4Q96EP9 437 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 LTV1Q96GA3 475 aaPredicted RBP6.87□□□□□ -1.31
PCF11-205ENST00000530906 SRCIN1Q9C0H9 1055 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 OSBPL3Q9H4L5 887 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 SCN11AQ9UI33 1791 aa6.87□□□□□ -1.31
PCF11-205ENST00000530906 RNMTO43148 476 aaKnown RBP6.86□□□□□ -1.31
PCF11-205ENST00000530906 EPB41L2O43491 1005 aaKnown RBP6.86□□□□□ -1.31
PCF11-205ENST00000530906 KRT24Q2M2I5 525 aa6.86□□□□□ -1.31
PCF11-205ENST00000530906 HSP90AB4PQ58FF6 505 aa6.86□□□□□ -1.31
PCF11-205ENST00000530906 SH3D19Q5HYK7 790 aa6.86□□□□□ -1.31
PCF11-205ENST00000530906 INTS6LQ5JSJ4 861 aaKnown RBP6.86□□□□□ -1.31
PCF11-205ENST00000530906 NANOS1Q8WY41 292 aaKnown RBP6.86□□□□□ -1.31
PCF11-205ENST00000530906 RAPGEF4Q8WZA2 1011 aa6.86□□□□□ -1.31
PCF11-205ENST00000530906 SNX21Q969T3 373 aa6.86□□□□□ -1.31
PCF11-205ENST00000530906 DBF4Q9UBU7 674 aaPredicted RBP6.86□□□□□ -1.31
PCF11-205ENST00000530906 SPG7Q9UQ90 795 aa6.86□□□□□ -1.31
PCF11-205ENST00000530906 XIRP1Q702N8 1843 aaKnown RBP6.85□□□□□ -1.31
PCF11-205ENST00000530906 SPATA31A3Q5VYP0 1347 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 SLC35F4A4IF30 521 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 BTBD11A6QL63 1104 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 RAB11FIP3O75154 756 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 ALDH1L1O75891 902 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 TATP17735 454 aaPredicted RBP6.85□□□□□ -1.31
PCF11-205ENST00000530906 ATP8B2P98198 1209 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 KCNMA1Q12791 1236 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 TTC22Q5TAA0 569 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 ZBTB33Q86T24 672 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 PLEKHM2Q8IWE5 1019 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 CCDC155Q8N6L0 562 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 AGBL1Q96MI9 1066 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 CNTNAP3BQ96NU0 1288 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 MEIS3Q99687 375 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 CNTNAP3Q9BZ76 1288 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 C1orf115Q9H7X2 142 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 HYPKQ9NX55 129 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 RGPD5Q99666 1765 aa6.85□□□□□ -1.31
PCF11-205ENST00000530906 REC8O95072 547 aa6.84□□□□□ -1.31
PCF11-205ENST00000530906 DDX58O95786 925 aaKnown RBP6.84□□□□□ -1.31
PCF11-205ENST00000530906 UBTFL1P0CB47 393 aaPredicted RBP6.84□□□□□ -1.31
PCF11-205ENST00000530906 CTSOP43234 321 aaPredicted RBP6.84□□□□□ -1.31
PCF11-205ENST00000530906 MFAP1P55081 439 aaKnown RBP6.84□□□□□ -1.31
PCF11-205ENST00000530906 DHX9Q08211 1270 aaKnown RBP6.84□□□□□ -1.31
PCF11-205ENST00000530906 SLC4A10Q6U841 1118 aa6.84□□□□□ -1.31
PCF11-205ENST00000530906 G2E3Q7L622 706 aa6.84□□□□□ -1.31
PCF11-205ENST00000530906 HSCBQ8IWL3 235 aa6.84□□□□□ -1.31
PCF11-205ENST00000530906 USHBP1Q8N6Y0 703 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms