RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 MAATS1Q7Z4T9 603 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 SIRT1Q96EB6 747 aa9.67□□□□□ -0.86
CTNND1-227ENST00000530748 CBX1P83916 185 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 SLC9C2Q5TAH2 1124 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 GIMAP6Q6P9H5 292 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 RASAL2Q9UJF2 1139 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 STX8Q9UNK0 236 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 RAD50Q92878 1312 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 PTPRKQ15262 1439 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 PLCG2P16885 1265 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 LMAN1P49257 510 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 UBE4AQ14139 1066 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 RBM17Q96I25 401 aaKnown RBP9.66□□□□□ -0.86
CTNND1-227ENST00000530748 FBLN1P23142 703 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 LRRC45Q96CN5 670 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 LRRC2Q9BYS8 371 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 GTPBP4Q9BZE4 634 aaKnown RBP9.66□□□□□ -0.86
CTNND1-227ENST00000530748 YTHDC2Q9H6S0 1430 aaKnown RBP9.66□□□□□ -0.86
CTNND1-227ENST00000530748 F8W031 263 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-227ENST00000530748 DDB1Q16531 1140 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 MAGEB6Q8N7X4 407 aa9.66□□□□□ -0.86
CTNND1-227ENST00000530748 PRPHP41219 470 aa9.65□□□□□ -0.86
CTNND1-227ENST00000530748 SPAG1Q07617 926 aa9.65□□□□□ -0.86
CTNND1-227ENST00000530748 TFCP2Q12800 502 aa9.65□□□□□ -0.86
CTNND1-227ENST00000530748 RNF187Q5TA31 235 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-227ENST00000530748 CEP85Q6P2H3 762 aa9.65□□□□□ -0.86
CTNND1-227ENST00000530748 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-227ENST00000530748 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
CTNND1-227ENST00000530748 PPFIA3O75145 1194 aa9.65□□□□□ -0.86
CTNND1-227ENST00000530748 SELENOOQ9BVL4 669 aa9.65□□□□□ -0.86
CTNND1-227ENST00000530748 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.86
CTNND1-227ENST00000530748 RNMTO43148 476 aaKnown RBP9.65□□□□□ -0.86
CTNND1-227ENST00000530748 RUFY3Q7L099 469 aa9.65□□□□□ -0.86
CTNND1-227ENST00000530748 NAP1L4Q99733 375 aaKnown RBP9.65□□□□□ -0.86
CTNND1-227ENST00000530748 HELLSQ9NRZ9 838 aa9.65□□□□□ -0.86
CTNND1-227ENST00000530748 BICDL2A1A5D9 508 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 FSD2A1L4K1 749 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 IRS4O14654 1257 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-227ENST00000530748 POLR3GO15318 223 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-227ENST00000530748 CALML3P27482 149 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 CEP112Q8N8E3 955 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 GIMAP7Q8NHV1 300 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 PLVAPQ9BX97 442 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 SYNCQ9H7C4 482 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 ADGBQ8N7X0 1667 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 TOM1O60784 492 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 LRRC59Q96AG4 307 aaKnown RBP9.64□□□□□ -0.87
CTNND1-227ENST00000530748 PRIMPOLQ96LW4 560 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 POLKQ9UBT6 870 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 PA2G4Q9UQ80 394 aaKnown RBP9.64□□□□□ -0.87
CTNND1-227ENST00000530748 A0A1W2PP64 1363 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 HOXC9P31274 260 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 GNG11P61952 73 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 ASIC1P78348 528 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 KIAA0753Q2KHM9 967 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 CREB3L3Q68CJ9 461 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 DCAF5Q96JK2 942 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 PSMA7O14818 248 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 CCDC175P0C221 793 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 TRMT1LQ7Z2T5 733 aaKnown RBP9.64□□□□□ -0.87
CTNND1-227ENST00000530748 AOPEPQ8N6M6 819 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 PABPN1LA6NDY0 278 aaKnown RBP9.64□□□□□ -0.87
CTNND1-227ENST00000530748 CCDC155Q8N6L0 562 aa9.64□□□□□ -0.87
CTNND1-227ENST00000530748 PHACTR2O75167 634 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 SPECC1Q5M775 1068 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
CTNND1-227ENST00000530748 PCDHB15Q9Y5E8 787 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 PLXNC1O60486 1568 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 B4DLN1 442 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 ACTN2P35609 894 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 MRPL12P52815 198 aaKnown RBP9.63□□□□□ -0.87
CTNND1-227ENST00000530748 SPECC1LQ69YQ0 1117 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 LINS1Q8NG48 757 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 LMBR1Q8WVP7 490 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 DHX58Q96C10 678 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 BICC1Q9H694 974 aaKnown RBP9.63□□□□□ -0.87
CTNND1-227ENST00000530748 HOMER2Q9NSB8 354 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 IQSEC3Q9UPP2 1182 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-227ENST00000530748 COMMD10Q9Y6G5 202 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 FAM13AO94988 1023 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 SREK1Q8WXA9 508 aaKnown RBP9.63□□□□□ -0.87
CTNND1-227ENST00000530748 EYA3Q99504 573 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 IKBKGQ9Y6K9 419 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 SPDYE3A6NKU9 549 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 SPTLC2O15270 562 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 FERP16591 822 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 MARCKSP29966 332 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-227ENST00000530748 BMS1Q14692 1282 aaKnown RBP9.63□□□□□ -0.87
CTNND1-227ENST00000530748 TPTE2Q6XPS3 522 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 BRAPQ7Z569 592 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 FAM200AQ8TCP9 573 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 C8orf37Q96NL8 207 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 ZRANB1Q9UGI0 708 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 MRVI1Q9Y6F6 885 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 AKR1B10O60218 316 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 TUBB4AP04350 444 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
CTNND1-227ENST00000530748 ZMYM4Q5VZL5 1548 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms