RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 PALLDQ8WX93 1383 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 JAK2O60674 1132 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 TBC1D8O95759 1140 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 BRD3Q15059 726 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 DHX32Q7L7V1 743 aaKnown RBP13.61□□□□□ -0.23
TRIM3-210ENST00000530724 REXO1L1PQ8IX06 675 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 AOPEPQ8N6M6 819 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 FSIP1Q8NA03 581 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 GOLGA5Q8TBA6 731 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 USP28Q96RU2 1077 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 COPRSQ9NQ92 184 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 CWC15Q9P013 229 aaKnown RBP13.61□□□□□ -0.23
TRIM3-210ENST00000530724 PARP3Q9Y6F1 533 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 UBR1Q8IWV7 1749 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 WDR19Q8NEZ3 1342 aa13.61□□□□□ -0.23
TRIM3-210ENST00000530724 POTEB2H3BUK9 544 aa13.6□□□□□ -0.23
TRIM3-210ENST00000530724 GRM8O00222 908 aa13.6□□□□□ -0.23
TRIM3-210ENST00000530724 MAP2K7O14733 419 aa13.6□□□□□ -0.23
TRIM3-210ENST00000530724 ARHGAP6O43182 974 aa13.6□□□□□ -0.23
TRIM3-210ENST00000530724 CTDNEP1O95476 244 aa13.6□□□□□ -0.23
TRIM3-210ENST00000530724 SCRN1Q12765 414 aa13.6□□□□□ -0.23
TRIM3-210ENST00000530724 G3BP1Q13283 466 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRIM3-210ENST00000530724 SYT10Q6XYQ8 523 aa13.6□□□□□ -0.23
TRIM3-210ENST00000530724 LINC00301Q8NCQ3 95 aa13.6□□□□□ -0.23
TRIM3-210ENST00000530724 DDX11Q96FC9 970 aa13.6□□□□□ -0.23
TRIM3-210ENST00000530724 KAZALD1Q96I82 304 aa13.6□□□□□ -0.23
TRIM3-210ENST00000530724 NAP1L2Q9ULW6 460 aaPredicted RBP13.6□□□□□ -0.23
TRIM3-210ENST00000530724 CARMIL3Q8ND23 1372 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 TNRQ92752 1358 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 CCDC151A5D8V7 595 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 CMA1P23946 247 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 USP5P45974 858 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 RAD51AP2Q09MP3 1159 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 TBX2Q13207 712 aaPredicted RBP13.59□□□□□ -0.23
TRIM3-210ENST00000530724 CT47A1Q5JQC4 288 aaPredicted RBP13.59□□□□□ -0.23
TRIM3-210ENST00000530724 CC2D1AQ6P1N0 951 aaPredicted RBP13.59□□□□□ -0.23
TRIM3-210ENST00000530724 Q6ZUG5 572 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
TRIM3-210ENST00000530724 AK7Q96M32 723 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 FSD1Q9BTV5 496 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 XPO4Q9C0E2 1151 aaKnown RBP13.59□□□□□ -0.23
TRIM3-210ENST00000530724 HELLSQ9NRZ9 838 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 ATG3Q9NT62 314 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 CHPF2Q9P2E5 772 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 CHMP3Q9Y3E7 222 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 ARHGAP23Q9P227 1491 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 SLIT3O75094 1523 aa13.59□□□□□ -0.23
TRIM3-210ENST00000530724 PTPDC1A2A3K4 754 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 PDE4CQ08493 712 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 MCMDC2Q4G0Z9 681 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 AKAP4Q5JQC9 854 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 ZNF589Q86UQ0 364 aaPredicted RBP13.58□□□□□ -0.24
TRIM3-210ENST00000530724 VSTM4Q8IW00 320 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 FBXO18Q8NFZ0 1043 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 ANKRD24Q8TF21 1146 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 HAUS7Q99871 368 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 HSD3B7Q9H2F3 369 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 GPR108Q9NPR9 543 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 TRMT1Q9NXH9 659 aaKnown RBP13.58□□□□□ -0.24
TRIM3-210ENST00000530724 PCDHA7Q9UN72 937 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 TAF6LQ9Y6J9 622 aa13.58□□□□□ -0.24
TRIM3-210ENST00000530724 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
TRIM3-210ENST00000530724 IVLP07476 585 aa13.57□□□□□ -0.24
TRIM3-210ENST00000530724 CYP21A2P08686 494 aa13.57□□□□□ -0.24
TRIM3-210ENST00000530724 COL9A3Q14050 684 aaPredicted RBP13.57□□□□□ -0.24
TRIM3-210ENST00000530724 RABL6Q3YEC7 729 aaPredicted RBP13.57□□□□□ -0.24
TRIM3-210ENST00000530724 TMEM139Q8IV31 216 aa13.57□□□□□ -0.24
TRIM3-210ENST00000530724 MNS1Q8NEH6 495 aa13.57□□□□□ -0.24
TRIM3-210ENST00000530724 C9orf78Q9NZ63 289 aaPredicted RBP13.57□□□□□ -0.24
TRIM3-210ENST00000530724 IFNKQ9P0W0 207 aa13.57□□□□□ -0.24
TRIM3-210ENST00000530724 RAB21Q9UL25 225 aa13.57□□□□□ -0.24
TRIM3-210ENST00000530724 HPSEQ9Y251 543 aa13.57□□□□□ -0.24
TRIM3-210ENST00000530724 MRFAP1Q9Y605 127 aa13.57□□□□□ -0.24
TRIM3-210ENST00000530724 SPEF2Q9C093 1822 aa13.57□□□□□ -0.24
TRIM3-210ENST00000530724 CAMTA1Q9Y6Y1 1673 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 ZNF609O15014 1411 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 NFAT5O94916 1531 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 STX10O60499 249 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 FANCCQ00597 558 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 TMC6Q7Z403 805 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 IP6K1Q92551 441 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 FUT8Q9BYC5 575 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 ARFGAP3Q9NP61 516 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
TRIM3-210ENST00000530724 PPP6R2O75170 966 aa13.55□□□□□ -0.24
TRIM3-210ENST00000530724 SLC3A2P08195 630 aaKnown RBP13.55□□□□□ -0.24
TRIM3-210ENST00000530724 ME1P48163 572 aa13.55□□□□□ -0.24
TRIM3-210ENST00000530724 MYL5Q02045 173 aa13.55□□□□□ -0.24
TRIM3-210ENST00000530724 SMC1AQ14683 1233 aaKnown RBP13.55□□□□□ -0.24
TRIM3-210ENST00000530724 DPCR1Q3MIW9 517 aa13.55□□□□□ -0.24
TRIM3-210ENST00000530724 AXDND1Q5T1B0 1012 aaPredicted RBP13.55□□□□□ -0.24
TRIM3-210ENST00000530724 MSANTD4Q8NCY6 345 aa13.55□□□□□ -0.24
TRIM3-210ENST00000530724 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRIM3-210ENST00000530724 SUCLG2Q96I99 432 aa13.55□□□□□ -0.24
TRIM3-210ENST00000530724 RASSF4Q9H2L5 321 aa13.55□□□□□ -0.24
TRIM3-210ENST00000530724 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRIM3-210ENST00000530724 ST7Q9NRC1 585 aa13.55□□□□□ -0.24
TRIM3-210ENST00000530724 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms