RNA–Protein interactions for RNA: ENST00000530396.1

NCAPD3-208, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 1,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-208ENST00000530396 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
NCAPD3-208ENST00000530396 CHPF2Q9P2E5 772 aa11.85□□□□□ -0.51
NCAPD3-208ENST00000530396 UTYO14607 1347 aa11.84□□□□□ -0.51
NCAPD3-208ENST00000530396 FOXN1O15353 648 aa11.84□□□□□ -0.51
NCAPD3-208ENST00000530396 VEGFBP49765 207 aa11.84□□□□□ -0.51
NCAPD3-208ENST00000530396 KSR2Q6VAB6 950 aa11.84□□□□□ -0.51
NCAPD3-208ENST00000530396 TTLL7Q6ZT98 887 aa11.84□□□□□ -0.51
NCAPD3-208ENST00000530396 ERC1Q8IUD2 1116 aa11.84□□□□□ -0.51
NCAPD3-208ENST00000530396 RPGRQ92834 1020 aaKnown RBP11.84□□□□□ -0.51
NCAPD3-208ENST00000530396 AIDAQ96BJ3 306 aa11.84□□□□□ -0.51
NCAPD3-208ENST00000530396 PRDM10Q9NQV6 1147 aa11.84□□□□□ -0.51
NCAPD3-208ENST00000530396 ERBB4Q15303 1308 aa11.83□□□□□ -0.51
NCAPD3-208ENST00000530396 UBN2Q6ZU65 1347 aa11.83□□□□□ -0.51
NCAPD3-208ENST00000530396 PI4KAP2A4QPH2 592 aa11.83□□□□□ -0.52
NCAPD3-208ENST00000530396 SURF6O75683 361 aaKnown RBP11.83□□□□□ -0.52
NCAPD3-208ENST00000530396 EIF6P56537 245 aaKnown RBP11.83□□□□□ -0.52
NCAPD3-208ENST00000530396 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
NCAPD3-208ENST00000530396 PI4KAP1Q8N8J0 262 aa11.83□□□□□ -0.52
NCAPD3-208ENST00000530396 NECTIN2Q92692 538 aa11.83□□□□□ -0.52
NCAPD3-208ENST00000530396 GZF1Q9H116 711 aaPredicted RBP11.83□□□□□ -0.52
NCAPD3-208ENST00000530396 RASSF10A6NK89 507 aa11.82□□□□□ -0.52
NCAPD3-208ENST00000530396 MYL6BP14649 208 aa11.82□□□□□ -0.52
NCAPD3-208ENST00000530396 GPTP24298 496 aa11.82□□□□□ -0.52
NCAPD3-208ENST00000530396 CTCFP49711 727 aaPredicted RBP11.82□□□□□ -0.52
NCAPD3-208ENST00000530396 ZNF445P59923 1031 aa11.82□□□□□ -0.52
NCAPD3-208ENST00000530396 ZNF34Q8IZ26 560 aa11.82□□□□□ -0.52
NCAPD3-208ENST00000530396 PI4K2BQ8TCG2 481 aa11.82□□□□□ -0.52
NCAPD3-208ENST00000530396 CRAMP1Q96RY5 1269 aa11.82□□□□□ -0.52
NCAPD3-208ENST00000530396 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
NCAPD3-208ENST00000530396 COL4A5P29400 1685 aa11.82□□□□□ -0.52
NCAPD3-208ENST00000530396 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 SRGAP3O43295 1099 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 GLRX3O76003 335 aaKnown RBP11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 NTSR2O95665 410 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 DDX58O95786 925 aaKnown RBP11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 EIF2S2P20042 333 aaKnown RBP11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 LMOD1P29536 600 aaPredicted RBP11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 HSPA4P34932 840 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 NEK4P51957 841 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 PARP10Q53GL7 1025 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 SUSD4Q5VX71 490 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 MAP1SQ66K74 1059 aaPredicted RBP11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 LARGE2Q8N3Y3 721 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 LINS1Q8NG48 757 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 RBM17Q96I25 401 aaKnown RBP11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 TMX3Q96JJ7 454 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 DDX21Q9NR30 783 aaKnown RBP eCLIP11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 LMBRD1Q9NUN5 540 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 WBP1LQ9NX94 342 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 RAD50Q92878 1312 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 TCHHQ07283 1943 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 PPEF1O14829 653 aaPredicted RBP11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 SGSM2O43147 1006 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 DEFB115Q30KQ5 88 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 RILPL2Q969X0 211 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 GJA3Q9Y6H8 435 aa11.81□□□□□ -0.52
NCAPD3-208ENST00000530396 LTBP1Q14766 1721 aa11.8□□□□□ -0.52
NCAPD3-208ENST00000530396 NBPF7P0C2Y1 421 aaPredicted RBP11.8□□□□□ -0.52
NCAPD3-208ENST00000530396 SCNN1DP51172 638 aa11.8□□□□□ -0.52
NCAPD3-208ENST00000530396 RUFY2Q8WXA3 655 aa11.8□□□□□ -0.52
NCAPD3-208ENST00000530396 GPATCH3Q96I76 525 aa11.8□□□□□ -0.52
NCAPD3-208ENST00000530396 ANO2Q9NQ90 1003 aa11.8□□□□□ -0.52
NCAPD3-208ENST00000530396 DDX49Q9Y6V7 483 aaKnown RBP11.8□□□□□ -0.52
NCAPD3-208ENST00000530396 BRD1O95696 1058 aa11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 USP50Q70EL3 339 aaPredicted RBP11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 NIM1KQ8IY84 436 aa11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 CLASRPQ8N2M8 674 aaKnown RBP11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 KCNB2Q92953 911 aa11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 NLRP3Q96P20 1036 aa11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 TMX4Q9H1E5 349 aaPredicted RBP11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 VPS33BQ9H267 617 aa11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 ABT1Q9ULW3 272 aaKnown RBP11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 ZDHHC9Q9Y397 364 aa11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 WDR33Q9C0J8 1336 aaKnown RBP11.79□□□□□ -0.52
NCAPD3-208ENST00000530396 MBD3O95983 291 aa11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 EPS15P42566 896 aa11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 SLC10A5Q5PT55 438 aa11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 LRP10Q7Z4F1 713 aa11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 ZGPATQ8N5A5 531 aaKnown RBP11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 IL1RAPL2Q9NP60 686 aa11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 MAP3K2Q9Y2U5 619 aa11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 ATP6V0A2Q9Y487 856 aa11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 THSD7BQ9C0I4 1608 aa11.78□□□□□ -0.52
NCAPD3-208ENST00000530396 GRM8O00222 908 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 HIP1O00291 1037 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 PPIP5K2O43314 1243 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 LBX1P52954 281 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 PDIA6Q15084 440 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 TSHZ3Q63HK5 1081 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 MCTP1Q6DN14 999 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 GAS2L3Q86XJ1 694 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 PPP1R9BQ96SB3 815 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 UTP14AQ9BVJ6 771 aaKnown RBP11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 TM6SF1Q9BZW5 370 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 LSG1Q9H089 658 aaKnown RBP11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 SNRKQ9NRH2 765 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 ECHDC1Q9NTX5 307 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms