RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 KBTBD3Q8NAB2 608 aa14.33□□□□□ -0.12
SCN3B-206ENST00000530277 TRERF1Q96PN7 1200 aa14.33□□□□□ -0.12
SCN3B-206ENST00000530277 CYP7A1P22680 504 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 ATP6V1AP38606 617 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 PLBD2Q8NHP8 589 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 MRPS27Q92552 414 aaKnown RBP14.32□□□□□ -0.12
SCN3B-206ENST00000530277 CBX8Q9HC52 389 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-206ENST00000530277 CYP21A2P08686 494 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 ANKIB1Q9P2G1 1089 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 SSRP1Q08945 709 aaKnown RBP14.32□□□□□ -0.12
SCN3B-206ENST00000530277 MAP7D2Q96T17 732 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 CPS1P31327 1500 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 POLR1AO95602 1720 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-206ENST00000530277 SPTLC2O15270 562 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 GPAA1O43292 621 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 GPIHBP1Q8IV16 184 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 ZSCAN16Q9H4T2 348 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-206ENST00000530277 NRBP1Q9UHY1 535 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 WWC3Q9ULE0 1092 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 TAF6LQ9Y6J9 622 aa14.32□□□□□ -0.12
SCN3B-206ENST00000530277 CDK12Q9NYV4 1490 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-206ENST00000530277 IGKV5-2P06315 115 aa14.31□□□□□ -0.12
SCN3B-206ENST00000530277 TOP1P11387 765 aaKnown RBP14.31□□□□□ -0.12
SCN3B-206ENST00000530277 ENOX2Q16206 610 aaKnown RBP14.31□□□□□ -0.12
SCN3B-206ENST00000530277 PPFIBP1Q86W92 1011 aa14.31□□□□□ -0.12
SCN3B-206ENST00000530277 IFNKQ9P0W0 207 aa14.31□□□□□ -0.12
SCN3B-206ENST00000530277 ASAP1Q9ULH1 1129 aa14.31□□□□□ -0.12
SCN3B-206ENST00000530277 MBD4O95243 580 aa14.31□□□□□ -0.12
SCN3B-206ENST00000530277 DNA2P51530 1060 aa14.31□□□□□ -0.12
SCN3B-206ENST00000530277 TRMT1LQ7Z2T5 733 aaKnown RBP14.31□□□□□ -0.12
SCN3B-206ENST00000530277 USP28Q96RU2 1077 aa14.31□□□□□ -0.12
SCN3B-206ENST00000530277 ARMT1Q9H993 441 aa14.31□□□□□ -0.12
SCN3B-206ENST00000530277 ADD1P35611 737 aaKnown RBP14.31□□□□□ -0.12
SCN3B-206ENST00000530277 PLIN2Q99541 437 aa14.31□□□□□ -0.12
SCN3B-206ENST00000530277 STX8Q9UNK0 236 aa14.31□□□□□ -0.12
SCN3B-206ENST00000530277 PTPRMP28827 1452 aa14.3□□□□□ -0.12
SCN3B-206ENST00000530277 HOXB7P09629 217 aa14.3□□□□□ -0.12
SCN3B-206ENST00000530277 CTDSPL2Q05D32 466 aa14.3□□□□□ -0.12
SCN3B-206ENST00000530277 STAMQ92783 540 aa14.3□□□□□ -0.12
SCN3B-206ENST00000530277 ZSWIM6Q9HCJ5 1215 aa14.3□□□□□ -0.12
SCN3B-206ENST00000530277 UVSSAQ2YD98 709 aa14.3□□□□□ -0.12
SCN3B-206ENST00000530277 MKNK2Q9HBH9 465 aa14.3□□□□□ -0.12
SCN3B-206ENST00000530277 CLASP1Q7Z460 1538 aa14.3□□□□□ -0.12
SCN3B-206ENST00000530277 E7EWF7 191 aa14.3□□□□□ -0.12
SCN3B-206ENST00000530277 CAVIN4Q5BKX8 364 aa14.29□□□□□ -0.12
SCN3B-206ENST00000530277 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
SCN3B-206ENST00000530277 TEX35Q5T0J7 233 aa14.29□□□□□ -0.12
SCN3B-206ENST00000530277 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
SCN3B-206ENST00000530277 WTAPQ15007 396 aa14.29□□□□□ -0.12
SCN3B-206ENST00000530277 FILIP1LQ4L180 1135 aa14.29□□□□□ -0.12
SCN3B-206ENST00000530277 DZIP1Q86YF9 867 aaKnown RBP14.29□□□□□ -0.12
SCN3B-206ENST00000530277 KIF18AQ8NI77 898 aa14.29□□□□□ -0.12
SCN3B-206ENST00000530277 UIMC1Q96RL1 719 aa14.29□□□□□ -0.12
SCN3B-206ENST00000530277 POLR3GO15318 223 aaPredicted RBP14.28□□□□□ -0.12
SCN3B-206ENST00000530277 CUL4AQ13619 759 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 MAP4K1Q92918 833 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 ARHGEF40Q8TER5 1519 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 CEP135Q66GS9 1140 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 UBXN4Q92575 508 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 NGLY1Q96IV0 654 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 HSPD1P10809 573 aaKnown RBP14.28□□□□□ -0.12
SCN3B-206ENST00000530277 ATP5JP18859 108 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 UBASH3AP57075 661 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 NLRP5P59047 1200 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 DNAI1Q9UI46 699 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 KIF24Q5T7B8 1368 aa14.28□□□□□ -0.12
SCN3B-206ENST00000530277 TSPY2A6NKD2 308 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 F8W031 263 aaPredicted RBP14.27□□□□□ -0.12
SCN3B-206ENST00000530277 TNNT3P45378 269 aaPredicted RBP14.27□□□□□ -0.12
SCN3B-206ENST00000530277 SCRN1Q12765 414 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 IQCA1Q86XH1 822 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 DHX58Q96C10 678 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 MAPK8IP1Q9UQF2 711 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 IQSEC2Q5JU85 1478 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 SMTNL1A8MU46 457 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 CCDC102BQ68D86 513 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 GOLGA6L1Q8N7Z2 621 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 CTCFLQ8NI51 663 aaPredicted RBP14.27□□□□□ -0.12
SCN3B-206ENST00000530277 CAGE1Q8TC20 777 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 PYCARDQ9ULZ3 195 aa14.27□□□□□ -0.12
SCN3B-206ENST00000530277 KDRP35968 1356 aa14.27□□□□□ -0.13
SCN3B-206ENST00000530277 CYP27B1O15528 508 aa14.27□□□□□ -0.13
SCN3B-206ENST00000530277 RBM5P52756 815 aaKnown RBP eCLIP14.27□□□□□ -0.13
SCN3B-206ENST00000530277 PTPN12Q05209 780 aaKnown RBP14.27□□□□□ -0.13
SCN3B-206ENST00000530277 AIFM3Q96NN9 605 aa14.27□□□□□ -0.13
SCN3B-206ENST00000530277 PPP1R9BQ96SB3 815 aa14.27□□□□□ -0.13
SCN3B-206ENST00000530277 ARGLU1Q9NWB6 273 aaPredicted RBP14.27□□□□□ -0.13
SCN3B-206ENST00000530277 TXLNAP40222 546 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 ZSCAN29Q8IWY8 852 aaPredicted RBP14.26□□□□□ -0.13
SCN3B-206ENST00000530277 ZFP91Q96JP5 570 aaPredicted RBP14.26□□□□□ -0.13
SCN3B-206ENST00000530277 AK9Q5TCS8 1911 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 ERCC3P19447 782 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 MTERF4Q7Z6M4 381 aaKnown RBP14.26□□□□□ -0.13
SCN3B-206ENST00000530277 GTF3C6Q969F1 213 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 TANGO6Q9C0B7 1094 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 ERBB3P21860 1342 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 AOX1Q06278 1338 aa14.26□□□□□ -0.13
SCN3B-206ENST00000530277 NLRP1Q9C000 1473 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms