RNA–Protein interactions for RNA: ENST00000529919.5

CTNND1-222, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 4,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-222ENST00000529919 KRT27Q7Z3Y8 459 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 USP48Q86UV5 1035 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 ZNF444Q8N0Y2 327 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-222ENST00000529919 EHBP1Q8NDI1 1231 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 GTPBP4Q9BZE4 634 aaKnown RBP9.1□□□□□ -0.95
CTNND1-222ENST00000529919 DNAJC25Q9H1X3 360 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 SNRKQ9NRH2 765 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 IQSEC3Q9UPP2 1182 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-222ENST00000529919 PIK3R4Q99570 1358 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 PLEKHG3A1L390 1219 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 EBAG9O00559 213 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 FAM182BQ5T319 152 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 FAM196AQ6ZSG2 479 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 RAB11FIP4Q86YS3 637 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 BRF1Q92994 677 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 NEK1Q96PY6 1258 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 TCP11L1Q9NUJ3 509 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 SERPINA10Q9UK55 444 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 CHD1O14646 1710 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 RNMTO43148 476 aaKnown RBP9.1□□□□□ -0.95
CTNND1-222ENST00000529919 HAND2P61296 217 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 SSRP1Q08945 709 aaKnown RBP9.1□□□□□ -0.95
CTNND1-222ENST00000529919 EVI5LQ96CN4 794 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 EYA3Q99504 573 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 CCDC94Q9BW85 323 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-222ENST00000529919 ZSCAN16Q9H4T2 348 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-222ENST00000529919 HOMER2Q9NSB8 354 aa9.1□□□□□ -0.95
CTNND1-222ENST00000529919 RIMBP2O15034 1052 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 TMEM266Q2M3C6 531 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 TTC22Q5TAA0 569 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 CCDC144CPQ8IYA2 1237 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 C10orf67Q8IYJ2 551 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 CABP5Q9NP86 173 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 PCDHB15Q9Y5E8 787 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 H0YIN7 160 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 CCDC6Q16204 474 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 KIAA0753Q2KHM9 967 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 C6orf163Q5TEZ5 329 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 VEZTQ9HBM0 779 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 UGGT1Q9NYU2 1555 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 MSL1Q68DK7 614 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 CCDC97Q96F63 343 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-222ENST00000529919 TRIM47Q96LD4 638 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 CCDC87Q9NVE4 849 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 BCS1LQ9Y276 419 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 HLA-DOAP06340 250 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 SDSP20132 328 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 CKAP4Q07065 602 aaKnown RBP9.09□□□□□ -0.95
CTNND1-222ENST00000529919 CETN1Q12798 172 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 KANK3Q6NY19 840 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 LMBR1LQ6UX01 489 aa9.09□□□□□ -0.95
CTNND1-222ENST00000529919 SYT1P21579 422 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 PTGS1P23219 599 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 HS1BP3Q53T59 392 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 AOPEPQ8N6M6 819 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 PTPRCP08575 1304 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 IRS4O14654 1257 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-222ENST00000529919 DNM1Q05193 864 aaKnown RBP9.08□□□□□ -0.96
CTNND1-222ENST00000529919 OTUD6BQ8N6M0 293 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 FLAD1Q8NFF5 587 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 SPAG5Q96R06 1193 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 RNF41Q9H4P4 317 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-222ENST00000529919 PLEKHG1Q9ULL1 1385 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 GOLIM4O00461 696 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 CYLC1P35663 651 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-222ENST00000529919 MLH3Q9UHC1 1453 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 KSR2Q6VAB6 950 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 TESK2Q96S53 571 aa9.08□□□□□ -0.96
CTNND1-222ENST00000529919 CFAP74Q9C0B2 1584 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 ZEB2O60315 1214 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 AMPD3Q01432 767 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 ZNF790Q6PG37 636 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 DNAJC10Q8IXB1 793 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 CCDC155Q8N6L0 562 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 ZNF408Q9H9D4 720 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 MAP3K5Q99683 1374 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 TMEM67Q5HYA8 995 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 TRMT1LQ7Z2T5 733 aaKnown RBP9.07□□□□□ -0.96
CTNND1-222ENST00000529919 CATIPQ7Z7H3 387 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 PPM1EQ8WY54 764 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 MRPS27Q92552 414 aaKnown RBP9.07□□□□□ -0.96
CTNND1-222ENST00000529919 BEGAINQ9BUH8 593 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 VPS18Q9P253 973 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 DNAJC21Q5F1R6 531 aaKnown RBP9.07□□□□□ -0.96
CTNND1-222ENST00000529919 ZNF804AQ7Z570 1209 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 SPATA24Q86W54 205 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 FAM114A1Q8IWE2 563 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 SEPT12Q8IYM1 358 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 CALML4Q96GE6 196 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 CARD14Q9BXL6 1004 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 LRRC2Q9BYS8 371 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 ERCC6L2Q5T890 1561 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 AFMP43652 599 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 METAP2P50579 478 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTNND1-222ENST00000529919 IRX3P78415 501 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-222ENST00000529919 TYRO3Q06418 890 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 LARGE2Q8N3Y3 721 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 CCDC24Q8N4L8 307 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 GOLGA1Q92805 767 aa9.07□□□□□ -0.96
CTNND1-222ENST00000529919 RBM17Q96I25 401 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms