RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 ATP5J2-PTCD1G3V325 749 aa18.38■□□□□ 0.53
TRIM3-208ENST00000529058 ZBTB48P10074 688 aaPredicted RBP18.38■□□□□ 0.53
TRIM3-208ENST00000529058 PLBD2Q8NHP8 589 aa18.38■□□□□ 0.53
TRIM3-208ENST00000529058 SLC10A4Q96EP9 437 aa18.38■□□□□ 0.53
TRIM3-208ENST00000529058 RANBP2P49792 3224 aaKnown RBP18.37■□□□□ 0.53
TRIM3-208ENST00000529058 CRHR2Q13324 411 aa18.37■□□□□ 0.53
TRIM3-208ENST00000529058 CHRDL2Q6WN34 429 aa18.37■□□□□ 0.53
TRIM3-208ENST00000529058 APOBEC3FQ8IUX4 373 aaKnown RBP18.37■□□□□ 0.53
TRIM3-208ENST00000529058 WNK4Q96J92 1243 aa18.37■□□□□ 0.53
TRIM3-208ENST00000529058 SASH1O94885 1247 aa18.36■□□□□ 0.53
TRIM3-208ENST00000529058 XDHP47989 1333 aa18.36■□□□□ 0.53
TRIM3-208ENST00000529058 SP3Q02447 781 aa18.36■□□□□ 0.53
TRIM3-208ENST00000529058 SLC4A8Q2Y0W8 1093 aa18.36■□□□□ 0.53
TRIM3-208ENST00000529058 OTUD7BQ6GQQ9 843 aa18.36■□□□□ 0.53
TRIM3-208ENST00000529058 ANKRD13DQ6ZTN6 518 aa18.36■□□□□ 0.53
TRIM3-208ENST00000529058 CUL9Q8IWT3 2517 aa18.36■□□□□ 0.53
TRIM3-208ENST00000529058 BABAM1Q9NWV8 329 aa18.36■□□□□ 0.53
TRIM3-208ENST00000529058 FZD1Q9UP38 647 aa18.36■□□□□ 0.53
TRIM3-208ENST00000529058 MYO3BQ8WXR4 1341 aa18.35■□□□□ 0.53
TRIM3-208ENST00000529058 ATP2B4P23634 1241 aa18.35■□□□□ 0.53
TRIM3-208ENST00000529058 CAP1Q01518 475 aa18.35■□□□□ 0.53
TRIM3-208ENST00000529058 MAP3K11Q16584 847 aa18.35■□□□□ 0.53
TRIM3-208ENST00000529058 DACT2Q5SW24 774 aa18.35■□□□□ 0.53
TRIM3-208ENST00000529058 NBPF11Q86T75 865 aa18.35■□□□□ 0.53
TRIM3-208ENST00000529058 MXD3Q9BW11 206 aa18.35■□□□□ 0.53
TRIM3-208ENST00000529058 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.35■□□□□ 0.53
TRIM3-208ENST00000529058 COL6A3P12111 3177 aa18.34■□□□□ 0.53
TRIM3-208ENST00000529058 A0A0C4DFX4 3053 aa18.34■□□□□ 0.53
TRIM3-208ENST00000529058 MAPK8IP3Q9UPT6 1336 aa18.34■□□□□ 0.53
TRIM3-208ENST00000529058 MMP14P50281 582 aa18.34■□□□□ 0.53
TRIM3-208ENST00000529058 SLC9C1Q4G0N8 1177 aa18.34■□□□□ 0.53
TRIM3-208ENST00000529058 CHPF2Q9P2E5 772 aa18.34■□□□□ 0.53
TRIM3-208ENST00000529058 RBM27Q9P2N5 1060 aaKnown RBP18.34■□□□□ 0.53
TRIM3-208ENST00000529058 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.53
TRIM3-208ENST00000529058 TRIM28Q13263 835 aaKnown RBP18.33■□□□□ 0.52
TRIM3-208ENST00000529058 CLMNQ96JQ2 1002 aa18.33■□□□□ 0.52
TRIM3-208ENST00000529058 HSP90B1P14625 803 aaKnown RBP18.32■□□□□ 0.52
TRIM3-208ENST00000529058 CCDC152Q4G0S7 254 aa18.32■□□□□ 0.52
TRIM3-208ENST00000529058 FBXW7Q969H0 707 aa18.32■□□□□ 0.52
TRIM3-208ENST00000529058 PTCH2Q9Y6C5 1203 aa18.32■□□□□ 0.52
TRIM3-208ENST00000529058 MED23Q9ULK4 1368 aa18.31■□□□□ 0.52
TRIM3-208ENST00000529058 ECM29Q5VYK3 1845 aa18.31■□□□□ 0.52
TRIM3-208ENST00000529058 PPP1R12BO60237 982 aaPredicted RBP18.31■□□□□ 0.52
TRIM3-208ENST00000529058 ARHGEF6Q15052 776 aa18.31■□□□□ 0.52
TRIM3-208ENST00000529058 STRIP1Q5VSL9 837 aa18.31■□□□□ 0.52
TRIM3-208ENST00000529058 ZBTB38Q8NAP3 1195 aaPredicted RBP18.31■□□□□ 0.52
TRIM3-208ENST00000529058 PNNQ9H307 717 aaKnown RBP18.31■□□□□ 0.52
TRIM3-208ENST00000529058 UNCXA6NJT0 531 aa18.3■□□□□ 0.52
TRIM3-208ENST00000529058 ANKRD18AQ8IVF6 992 aa18.3■□□□□ 0.52
TRIM3-208ENST00000529058 DEFB129Q9H1M3 183 aa18.3■□□□□ 0.52
TRIM3-208ENST00000529058 SSC5DA1L4H1 1573 aa18.3■□□□□ 0.52
TRIM3-208ENST00000529058 SPEF2Q9C093 1822 aa18.29■□□□□ 0.52
TRIM3-208ENST00000529058 WTIPA6NIX2 430 aaPredicted RBP18.29■□□□□ 0.52
TRIM3-208ENST00000529058 MYCP01106 439 aaPredicted RBP18.29■□□□□ 0.52
TRIM3-208ENST00000529058 KRT24Q2M2I5 525 aa18.29■□□□□ 0.52
TRIM3-208ENST00000529058 ZBED3Q96IU2 234 aaPredicted RBP18.29■□□□□ 0.52
TRIM3-208ENST00000529058 PTPN18Q99952 460 aa18.29■□□□□ 0.52
TRIM3-208ENST00000529058 TESPA1A2RU30 521 aaPredicted RBP18.28■□□□□ 0.52
TRIM3-208ENST00000529058 GJA5P36382 358 aa18.28■□□□□ 0.52
TRIM3-208ENST00000529058 RIPK4P57078 832 aa18.28■□□□□ 0.52
TRIM3-208ENST00000529058 KIAA0825Q8IV33 1275 aa18.28■□□□□ 0.52
TRIM3-208ENST00000529058 CCDC85AQ96PX6 553 aaPredicted RBP18.28■□□□□ 0.52
TRIM3-208ENST00000529058 COA1Q9GZY4 146 aa18.28■□□□□ 0.52
TRIM3-208ENST00000529058 PDE8AO60658 829 aa18.27■□□□□ 0.52
TRIM3-208ENST00000529058 HDGFL1Q5TGJ6 251 aa18.27■□□□□ 0.52
TRIM3-208ENST00000529058 DPF3Q92784 378 aa18.27■□□□□ 0.52
TRIM3-208ENST00000529058 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
TRIM3-208ENST00000529058 PPP2R3BQ9Y5P8 575 aa18.27■□□□□ 0.52
TRIM3-208ENST00000529058 TTLL5Q6EMB2 1281 aa18.26■□□□□ 0.51
TRIM3-208ENST00000529058 OTOFQ9HC10 1997 aa18.26■□□□□ 0.51
TRIM3-208ENST00000529058 IREB2P48200 963 aaKnown RBP18.25■□□□□ 0.51
TRIM3-208ENST00000529058 SUPT20HL1Q3ZLR7 823 aa18.25■□□□□ 0.51
TRIM3-208ENST00000529058 PRO3102Q9H379 93 aa18.25■□□□□ 0.51
TRIM3-208ENST00000529058 HYPKQ9NX55 129 aa18.25■□□□□ 0.51
TRIM3-208ENST00000529058 PCCAP05165 728 aaPredicted RBP18.24■□□□□ 0.51
TRIM3-208ENST00000529058 MNX1P50219 401 aaPredicted RBP18.24■□□□□ 0.51
TRIM3-208ENST00000529058 CCT4P50991 539 aaKnown RBP18.24■□□□□ 0.51
TRIM3-208ENST00000529058 ANKRD13AQ8IZ07 590 aa18.24■□□□□ 0.51
TRIM3-208ENST00000529058 SH3TC2Q8TF17 1288 aa18.24■□□□□ 0.51
TRIM3-208ENST00000529058 CDC5LQ99459 802 aaKnown RBP18.24■□□□□ 0.51
TRIM3-208ENST00000529058 MINPP1Q9UNW1 487 aa18.24■□□□□ 0.51
TRIM3-208ENST00000529058 ZSWIM8A7E2V4 1837 aa18.23■□□□□ 0.51
TRIM3-208ENST00000529058 MYH3P11055 1940 aa18.23■□□□□ 0.51
TRIM3-208ENST00000529058 HOXB7P09629 217 aa18.23■□□□□ 0.51
TRIM3-208ENST00000529058 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
TRIM3-208ENST00000529058 DLGAP5Q15398 846 aa18.23■□□□□ 0.51
TRIM3-208ENST00000529058 TAF1CQ15572 869 aaPredicted RBP18.23■□□□□ 0.51
TRIM3-208ENST00000529058 RIC3Q7Z5B4 369 aa18.23■□□□□ 0.51
TRIM3-208ENST00000529058 TXNRD3Q86VQ6 643 aa18.23■□□□□ 0.51
TRIM3-208ENST00000529058 ZFYVE28Q9HCC9 887 aa18.23■□□□□ 0.51
TRIM3-208ENST00000529058 ZNF804BA4D1E1 1349 aa18.23■□□□□ 0.51
TRIM3-208ENST00000529058 LAMA3Q16787 3333 aa18.22■□□□□ 0.51
TRIM3-208ENST00000529058 CHL1O00533 1208 aa18.22■□□□□ 0.51
TRIM3-208ENST00000529058 USP2O75604 605 aaPredicted RBP18.22■□□□□ 0.51
TRIM3-208ENST00000529058 CCDC191Q8NCU4 936 aa18.22■□□□□ 0.51
TRIM3-208ENST00000529058 MS4A4AQ96JQ5 239 aa18.22■□□□□ 0.51
TRIM3-208ENST00000529058 BSDC1Q9NW68 430 aaPredicted RBP18.22■□□□□ 0.51
TRIM3-208ENST00000529058 GTF2IP78347 998 aa18.21■□□□□ 0.51
TRIM3-208ENST00000529058 NBPF12Q5TAG4 269 aaPredicted RBP18.21■□□□□ 0.51
TRIM3-208ENST00000529058 MTMR14Q8NCE2 650 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms