RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 AGLP35573 1532 aa17.03■□□□□ 0.32
CAPN1-214ENST00000528165 NDUFA8P51970 172 aa17.02■□□□□ 0.32
CAPN1-214ENST00000528165 APOBRQ0VD83 1088 aa17.02■□□□□ 0.32
CAPN1-214ENST00000528165 NEK11Q8NG66 645 aa17.02■□□□□ 0.32
CAPN1-214ENST00000528165 A0A1W2PQ27 194 aa17.02■□□□□ 0.32
CAPN1-214ENST00000528165 A0A1W2PQ64 194 aa17.02■□□□□ 0.32
CAPN1-214ENST00000528165 A0A1W2PQD8 194 aa17.02■□□□□ 0.32
CAPN1-214ENST00000528165 EFCAB8A8MWE9 144 aa17.02■□□□□ 0.32
CAPN1-214ENST00000528165 ATP8B1O43520 1251 aa17.02■□□□□ 0.32
CAPN1-214ENST00000528165 RAD51AP2Q09MP3 1159 aa17.02■□□□□ 0.32
CAPN1-214ENST00000528165 PROSER3Q2NL68 480 aa17.02■□□□□ 0.32
CAPN1-214ENST00000528165 DHX32Q7L7V1 743 aaKnown RBP17.02■□□□□ 0.32
CAPN1-214ENST00000528165 BIN1O00499 593 aa17.02■□□□□ 0.31
CAPN1-214ENST00000528165 TADA3O75528 432 aa17.02■□□□□ 0.31
CAPN1-214ENST00000528165 GPS2Q13227 327 aa17.02■□□□□ 0.31
CAPN1-214ENST00000528165 KLHDC4Q8TBB5 520 aa17.02■□□□□ 0.31
CAPN1-214ENST00000528165 SEC31AO94979 1220 aaKnown RBP17.01■□□□□ 0.31
CAPN1-214ENST00000528165 SLC3A2P08195 630 aaKnown RBP17.01■□□□□ 0.31
CAPN1-214ENST00000528165 STK38Q15208 465 aa17.01■□□□□ 0.31
CAPN1-214ENST00000528165 LRRFIP1Q32MZ4 808 aaKnown RBP17.01■□□□□ 0.31
CAPN1-214ENST00000528165 CCDC158Q5M9N0 1113 aa17.01■□□□□ 0.31
CAPN1-214ENST00000528165 CARD6Q9BX69 1037 aa17.01■□□□□ 0.31
CAPN1-214ENST00000528165 RTEL1Q9NZ71 1219 aa17.01■□□□□ 0.31
CAPN1-214ENST00000528165 ADAMTS13Q76LX8 1427 aa17.01■□□□□ 0.31
CAPN1-214ENST00000528165 PPFIA3O75145 1194 aa17.01■□□□□ 0.31
CAPN1-214ENST00000528165 ATP5JP18859 108 aa17.01■□□□□ 0.31
CAPN1-214ENST00000528165 MAPK8IP2Q13387 824 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-214ENST00000528165 MCMDC2Q4G0Z9 681 aa17.01■□□□□ 0.31
CAPN1-214ENST00000528165 ILDR1Q86SU0 546 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-214ENST00000528165 SEC62Q99442 399 aaKnown RBP17.01■□□□□ 0.31
CAPN1-214ENST00000528165 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
CAPN1-214ENST00000528165 PIK3C2AO00443 1686 aa17.01■□□□□ 0.31
CAPN1-214ENST00000528165 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
CAPN1-214ENST00000528165 NLRP12P59046 1061 aa17■□□□□ 0.31
CAPN1-214ENST00000528165 FANCCQ00597 558 aa17■□□□□ 0.31
CAPN1-214ENST00000528165 STOX1Q6ZVD7 989 aa17■□□□□ 0.31
CAPN1-214ENST00000528165 NCOA5Q9HCD5 579 aaKnown RBP17■□□□□ 0.31
CAPN1-214ENST00000528165 NCAPD2Q15021 1401 aa17■□□□□ 0.31
CAPN1-214ENST00000528165 TMEM2Q9UHN6 1383 aa17■□□□□ 0.31
CAPN1-214ENST00000528165 UTYO14607 1347 aa17■□□□□ 0.31
CAPN1-214ENST00000528165 TRIM65Q6PJ69 517 aa17■□□□□ 0.31
CAPN1-214ENST00000528165 TRIM34Q9BYJ4 488 aa17■□□□□ 0.31
CAPN1-214ENST00000528165 FEZ2Q9UHY8 353 aaPredicted RBP17■□□□□ 0.31
CAPN1-214ENST00000528165 MED1Q15648 1581 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-214ENST00000528165 ZNF609O15014 1411 aa16.99■□□□□ 0.31
CAPN1-214ENST00000528165 EVCP57679 992 aa16.99■□□□□ 0.31
CAPN1-214ENST00000528165 KDM3BQ7LBC6 1761 aa16.99■□□□□ 0.31
CAPN1-214ENST00000528165 DDX58O95786 925 aaKnown RBP16.99■□□□□ 0.31
CAPN1-214ENST00000528165 OAS2P29728 719 aaKnown RBP16.99■□□□□ 0.31
CAPN1-214ENST00000528165 NCAPHQ15003 741 aa16.99■□□□□ 0.31
CAPN1-214ENST00000528165 KCNG4Q8TDN1 519 aa16.99■□□□□ 0.31
CAPN1-214ENST00000528165 MUM1L1Q5H9M0 696 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 KRBA2Q6ZNG9 492 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 LINC00301Q8NCQ3 95 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 NDUFB9Q9Y6M9 179 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 SALL1Q9NSC2 1324 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 ZSCAN12O43309 604 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 CHGBP05060 677 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 ST5P78524 1137 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 PSME1Q06323 249 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 SMARCE1Q969G3 411 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 CHMP4CQ96CF2 233 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 UTP14AQ9BVJ6 771 aaKnown RBP16.98■□□□□ 0.31
CAPN1-214ENST00000528165 DBNLQ9UJU6 430 aaKnown RBP16.98■□□□□ 0.31
CAPN1-214ENST00000528165 PARP3Q9Y6F1 533 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 RFX7Q2KHR2 1363 aa16.98■□□□□ 0.31
CAPN1-214ENST00000528165 DIP2BQ9P265 1576 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 AIMP1Q12904 312 aaKnown RBP16.97■□□□□ 0.31
CAPN1-214ENST00000528165 UBXN6Q9BZV1 441 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 SLIT1O75093 1534 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 IKBKBO14920 756 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 CBFA2T2O43439 604 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 TBC1D8O95759 1140 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 SMC1AQ14683 1233 aaKnown RBP16.97■□□□□ 0.31
CAPN1-214ENST00000528165 CC2D1AQ6P1N0 951 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-214ENST00000528165 MPRIPQ6WCQ1 1025 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 ABCC6O95255 1503 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 ZNF202O95125 648 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 SERPINC1P01008 464 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 UBASH3AP57075 661 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 ZNF530Q6P9A1 599 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-214ENST00000528165 ABTB2Q8N961 1025 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 ZCCHC17Q9NP64 241 aaKnown RBP16.97■□□□□ 0.31
CAPN1-214ENST00000528165 CLIC4Q9Y696 253 aa16.97■□□□□ 0.31
CAPN1-214ENST00000528165 SPTLC2O15270 562 aa16.96■□□□□ 0.31
CAPN1-214ENST00000528165 SASH3O75995 380 aa16.96■□□□□ 0.31
CAPN1-214ENST00000528165 ATP1A3P13637 1013 aa16.96■□□□□ 0.31
CAPN1-214ENST00000528165 GNL2Q13823 731 aaKnown RBP16.96■□□□□ 0.31
CAPN1-214ENST00000528165 GPR161Q8N6U8 529 aaKnown RBP16.96■□□□□ 0.31
CAPN1-214ENST00000528165 NEDD4P46934 1319 aa16.96■□□□□ 0.31
CAPN1-214ENST00000528165 FANCGO15287 622 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 YEATS4O95619 227 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 PDIA3P30101 505 aaKnown RBP16.96■□□□□ 0.3
CAPN1-214ENST00000528165 EXOSC10Q01780 885 aaKnown RBP16.96■□□□□ 0.3
CAPN1-214ENST00000528165 CFAP100Q494V2 611 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 TNNI3KQ59H18 835 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 AKAP4Q5JQC9 854 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 FCHSD1Q86WN1 690 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 REXO1L1PQ8IX06 675 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms