RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SAMD7Q7Z3H4 446 aa41.58■■■■■ 4.25
SSSCA1-205ENST00000527920 CNTNAP1P78357 1384 aa41.58■■■■■ 4.25
SSSCA1-205ENST00000527920 ZNF280AP59817 542 aaPredicted RBP41.57■■■■■ 4.25
SSSCA1-205ENST00000527920 ANKRD44Q8N8A2 993 aa41.57■■■■■ 4.25
SSSCA1-205ENST00000527920 ARHGAP45Q92619 1136 aa41.57■■■■■ 4.25
SSSCA1-205ENST00000527920 CNNM1Q9NRU3 951 aa41.57■■■■■ 4.25
SSSCA1-205ENST00000527920 IRS2Q9Y4H2 1338 aa41.57■■■■■ 4.25
SSSCA1-205ENST00000527920 KLRK1P26718 216 aa41.56■■■■■ 4.24
SSSCA1-205ENST00000527920 STRIP1Q5VSL9 837 aa41.56■■■■■ 4.24
SSSCA1-205ENST00000527920 TAF5LO75529 589 aa41.55■■■■■ 4.24
SSSCA1-205ENST00000527920 TBC1D10BQ4KMP7 808 aaPredicted RBP41.55■■■■■ 4.24
SSSCA1-205ENST00000527920 CDC37L1Q7L3B6 337 aa41.54■■■■■ 4.24
SSSCA1-205ENST00000527920 HELBQ8NG08 1087 aaPredicted RBP41.54■■■■■ 4.24
SSSCA1-205ENST00000527920 A0A1B0GUL6 1792 aa41.53■■■■■ 4.24
SSSCA1-205ENST00000527920 MYO3BQ8WXR4 1341 aa41.53■■■■■ 4.24
SSSCA1-205ENST00000527920 TRAF5O00463 557 aa41.53■■■■■ 4.24
SSSCA1-205ENST00000527920 EGFRP00533 1210 aa41.53■■■■■ 4.24
SSSCA1-205ENST00000527920 KIF4BQ2VIQ3 1234 aa41.53■■■■■ 4.24
SSSCA1-205ENST00000527920 DACT2Q5SW24 774 aa41.53■■■■■ 4.24
SSSCA1-205ENST00000527920 MKRN1Q9UHC7 482 aaKnown RBP41.53■■■■■ 4.24
SSSCA1-205ENST00000527920 GLIS2Q9BZE0 524 aaPredicted RBP41.52■■■■■ 4.24
SSSCA1-205ENST00000527920 RASSF10A6NK89 507 aa41.51■■■■■ 4.24
SSSCA1-205ENST00000527920 USP17L8P0C7I0 530 aa41.51■■■■■ 4.24
SSSCA1-205ENST00000527920 SNAP23O00161 211 aa41.49■■■■■ 4.23
SSSCA1-205ENST00000527920 MMP14P50281 582 aa41.49■■■■■ 4.23
SSSCA1-205ENST00000527920 FMR1Q06787 632 aaKnown RBP eCLIP41.49■■■■■ 4.23
SSSCA1-205ENST00000527920 CD209Q9NNX6 404 aa41.49■■■■■ 4.23
SSSCA1-205ENST00000527920 RIPOR2Q9Y4F9 1068 aa41.49■■■■■ 4.23
SSSCA1-205ENST00000527920 CST9Q5W186 159 aa41.48■■■■■ 4.23
SSSCA1-205ENST00000527920 MROH5Q6ZUA9 1318 aa41.47■■■■■ 4.23
SSSCA1-205ENST00000527920 UBE4AQ14139 1066 aa41.47■■■■■ 4.23
SSSCA1-205ENST00000527920 RBM26Q5T8P6 1007 aaKnown RBP41.47■■■■■ 4.23
SSSCA1-205ENST00000527920 TRPM7Q96QT4 1865 aa41.47■■■■■ 4.23
SSSCA1-205ENST00000527920 ZNF646O15015 1829 aaPredicted RBP41.46■■■■■ 4.23
SSSCA1-205ENST00000527920 TTLL5Q6EMB2 1281 aa41.46■■■■■ 4.23
SSSCA1-205ENST00000527920 ZNF804AQ7Z570 1209 aa41.46■■■■■ 4.23
SSSCA1-205ENST00000527920 PUS3Q9BZE2 481 aaKnown RBP41.46■■■■■ 4.23
SSSCA1-205ENST00000527920 UBTFL1P0CB47 393 aaPredicted RBP41.45■■■■■ 4.23
SSSCA1-205ENST00000527920 ABT1Q9ULW3 272 aaKnown RBP41.45■■■■■ 4.23
SSSCA1-205ENST00000527920 HDAC5Q9UQL6 1122 aa41.45■■■■■ 4.23
SSSCA1-205ENST00000527920 PCNTO95613 3336 aa41.45■■■■■ 4.23
SSSCA1-205ENST00000527920 IPO8O15397 1037 aaKnown RBP41.44■■■■■ 4.22
SSSCA1-205ENST00000527920 IL1R1P14778 569 aa41.44■■■■■ 4.22
SSSCA1-205ENST00000527920 DCPSQ96C86 337 aaKnown RBP41.44■■■■■ 4.22
SSSCA1-205ENST00000527920 MYOZ2Q9NPC6 264 aa41.44■■■■■ 4.22
SSSCA1-205ENST00000527920 PLIN1O60240 522 aa41.43■■■■■ 4.22
SSSCA1-205ENST00000527920 DEFB115Q30KQ5 88 aa41.43■■■■■ 4.22
SSSCA1-205ENST00000527920 INTS3Q68E01 1043 aaKnown RBP41.43■■■■■ 4.22
SSSCA1-205ENST00000527920 KRT26Q7Z3Y9 468 aa41.43■■■■■ 4.22
SSSCA1-205ENST00000527920 ZBED9Q6R2W3 1325 aa41.43■■■■■ 4.22
SSSCA1-205ENST00000527920 OGFOD1Q8N543 542 aa41.42■■■■■ 4.22
SSSCA1-205ENST00000527920 FBXW7Q969H0 707 aa41.42■■■■■ 4.22
SSSCA1-205ENST00000527920 CELF2O95319 508 aaKnown RBP41.41■■■■■ 4.22
SSSCA1-205ENST00000527920 VEGFBP49765 207 aa41.41■■■■■ 4.22
SSSCA1-205ENST00000527920 USP48Q86UV5 1035 aa41.41■■■■■ 4.22
SSSCA1-205ENST00000527920 TLL2Q9Y6L7 1015 aa41.41■■■■■ 4.22
SSSCA1-205ENST00000527920 GTF2IP78347 998 aa41.4■■■■■ 4.22
SSSCA1-205ENST00000527920 MXD3Q9BW11 206 aa41.4■■■■■ 4.22
SSSCA1-205ENST00000527920 GGA3Q9NZ52 723 aa41.4■■■■■ 4.22
SSSCA1-205ENST00000527920 SCARF1Q14162 830 aa41.38■■■■■ 4.21
SSSCA1-205ENST00000527920 LRRC24Q50LG9 513 aa41.38■■■■■ 4.21
SSSCA1-205ENST00000527920 RFX5P48382 616 aaPredicted RBP41.37■■■■■ 4.21
SSSCA1-205ENST00000527920 PITPNM2Q9BZ72 1349 aa41.37■■■■■ 4.21
SSSCA1-205ENST00000527920 ATF7IPQ6VMQ6 1270 aa41.36■■■■■ 4.21
SSSCA1-205ENST00000527920 SULF1Q8IWU6 871 aa41.36■■■■■ 4.21
SSSCA1-205ENST00000527920 VGLL2Q8N8G2 317 aa41.36■■■■■ 4.21
SSSCA1-205ENST00000527920 BCAR3O75815 825 aa41.35■■■■■ 4.21
SSSCA1-205ENST00000527920 TRIM27P14373 513 aa41.35■■■■■ 4.21
SSSCA1-205ENST00000527920 FKBP1AP62942 108 aaKnown RBP41.35■■■■■ 4.21
SSSCA1-205ENST00000527920 METTL24Q5JXM2 366 aa41.35■■■■■ 4.21
SSSCA1-205ENST00000527920 HHIPL1Q96JK4 782 aa41.35■■■■■ 4.21
SSSCA1-205ENST00000527920 SAPCD2Q86UD0 394 aa41.34■■■■■ 4.21
SSSCA1-205ENST00000527920 ASTN2O75129 1339 aaPredicted RBP41.34■■■■■ 4.21
SSSCA1-205ENST00000527920 PDE8BO95263 885 aa41.33■■■■■ 4.21
SSSCA1-205ENST00000527920 KLHDC4Q8TBB5 520 aa41.33■■■■■ 4.21
SSSCA1-205ENST00000527920 MEIS3Q99687 375 aa41.33■■■■■ 4.21
SSSCA1-205ENST00000527920 FBXO3Q9UK99 471 aa41.33■■■■■ 4.21
SSSCA1-205ENST00000527920 HDAC9Q9UKV0 1011 aa41.33■■■■■ 4.21
SSSCA1-205ENST00000527920 ADM5C9JUS6 153 aa41.32■■■■■ 4.21
SSSCA1-205ENST00000527920 SASH1O94885 1247 aa41.32■■■■■ 4.21
SSSCA1-205ENST00000527920 HSPA1AP0DMV8 641 aaKnown RBP41.32■■■■■ 4.21
SSSCA1-205ENST00000527920 HSPA1BP0DMV9 641 aaKnown RBP41.32■■■■■ 4.21
SSSCA1-205ENST00000527920 PTPN12Q05209 780 aaKnown RBP41.32■■■■■ 4.21
SSSCA1-205ENST00000527920 ANGEL2Q5VTE6 544 aaKnown RBP41.32■■■■■ 4.21
SSSCA1-205ENST00000527920 EYA2O00167 538 aa41.31■■■■■ 4.2
SSSCA1-205ENST00000527920 GNAI3P08754 354 aa41.31■■■■■ 4.2
SSSCA1-205ENST00000527920 HIBADHP31937 336 aaKnown RBP41.31■■■■■ 4.2
SSSCA1-205ENST00000527920 ECE1P42892 770 aa41.31■■■■■ 4.2
SSSCA1-205ENST00000527920 KIAA0825Q8IV33 1275 aa41.31■■■■■ 4.2
SSSCA1-205ENST00000527920 TDRD7Q8NHU6 1098 aaKnown RBP41.31■■■■■ 4.2
SSSCA1-205ENST00000527920 FAM84BQ96KN1 310 aaPredicted RBP41.31■■■■■ 4.2
SSSCA1-205ENST00000527920 ZNF408Q9H9D4 720 aa41.31■■■■■ 4.2
SSSCA1-205ENST00000527920 LRRFIP2Q9Y608 721 aaKnown RBP41.31■■■■■ 4.2
SSSCA1-205ENST00000527920 FAM205AQ6ZU69 1335 aa41.3■■■■■ 4.2
SSSCA1-205ENST00000527920 WDR33Q9C0J8 1336 aaKnown RBP41.3■■■■■ 4.2
SSSCA1-205ENST00000527920 FRAT1Q92837 279 aaPredicted RBP41.3■■■■■ 4.2
SSSCA1-205ENST00000527920 CERS5Q8N5B7 392 aa41.29■■■■■ 4.2
SSSCA1-205ENST00000527920 WNT10BO00744 389 aa41.28■■■■■ 4.2
SSSCA1-205ENST00000527920 GYG1P46976 350 aa41.28■■■■■ 4.2
SSSCA1-205ENST00000527920 NBPF9Q3BBW0 867 aa41.27■■■■■ 4.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms